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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PGAM1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
97.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
374.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
318.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
280.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
260.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
234.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
200.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
195.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
184.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
183.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
182.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
171.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
166.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
160.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
154.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
154.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
153.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
146.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
145.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
144.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
138.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
133.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
130.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
129.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
126.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
122.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
119.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
118.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
116.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
115.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
115.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
112.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
111.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
107.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
106.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
102.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
92.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
92.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
86.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
78.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
60.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
52.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
33.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
7.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
6.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
5.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
4.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
3.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
3.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
3.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
2.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
2.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
1.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
1.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PGAM1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
351.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
863.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
859.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
745.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
722.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
718.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
704.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
703.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
695.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
695.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
684.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
681.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
677.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
672.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
668.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
665.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
658.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
655.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
654.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
653.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
649.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
647.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
646.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
645.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
643.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
639.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
639.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
628.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
626.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
618.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
617.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
613.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
611.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
607.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
606.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
606.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
606.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
592.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
590.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
588.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
586.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
585.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
582.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
581.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
580.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
580.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
580.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
580.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
579.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
575.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
574.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
573.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
572.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
571.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
569.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
566.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
565.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
562.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
558.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
556.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
556.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
543.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
532.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
530.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
530.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
529.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
524.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
521.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
521.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
521.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
516.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
515.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
512.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
510.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
510.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
506.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
503.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
497.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
497.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
496.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
495.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
494.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
493.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
492.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
491.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
491.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
490.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
490.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
490.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
489.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
489.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
488.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
488.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
486.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
486.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
486.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
486.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
485.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
484.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
482.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
481.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
480.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
478.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
478.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
477.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
477.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
477.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
476.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
474.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
474.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
471.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
471.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
470.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
467.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
467.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
464.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
463.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
462.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
460.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
459.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
456.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
456.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
455.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
454.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
453.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
452.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
451.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
449.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
449.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
447.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
447.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
446.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
445.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
445.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
443.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
443.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
443.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
442.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
442.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
441.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
440.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
439.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
437.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
436.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
434.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
432.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
432.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
432.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
432.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
430.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
428.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
428.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
427.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
427.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
426.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
424.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
423.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
423.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
423.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
421.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
421.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
420.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
420.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
419.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
419.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
417.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
415.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
415.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
413.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
412.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
411.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
410.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
410.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
409.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
409.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
409.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
408.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
408.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
407.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
406.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
406.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
406.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
405.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
404.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
402.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
402.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
400.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
400.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
400.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
399.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
399.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
398.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
398.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
396.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
396.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
395.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
394.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
394.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
393.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
393.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
392.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
391.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
391.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
391.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
391.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
390.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
390.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
390.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
390.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
389.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
389.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
388.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
387.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
387.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
387.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
387.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
382.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
382.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
382.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
382.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
382.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
382.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
381.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
381.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
381.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
379.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
379.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
378.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
377.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
377.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
375.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
372.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
372.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
371.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
369.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
368.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
367.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
367.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
367.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
366.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
366.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
365.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
363.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
363.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
362.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
361.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
361.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
361.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
361.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
360.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
359.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
357.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
357.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
356.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
356.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
355.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
355.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
354.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
353.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
349.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
349.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
348.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
344.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
340.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
340.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
339.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
339.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
339.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
338.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
337.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
335.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
334.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
333.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
333.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
333.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
333.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
329.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
329.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
328.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
328.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
326.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
325.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
324.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
323.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
323.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
323.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
323.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
323.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
321.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
321.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
319.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
319.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
318.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
317.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
317.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
317.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
317.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
317.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
314.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
314.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
314.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
314.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
313.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
311.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
310.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
310.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
310.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
308.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
308.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
308.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
308.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
308.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
306.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
306.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
304.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
304.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
303.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
303.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
302.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
300.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
300.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
300.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
298.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
297.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
294.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
293.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
291.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
290.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
289.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
288.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
287.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
286.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
284.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
284.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
283.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
282.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
282.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
281.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
280.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
278.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
278.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
277.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
276.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
276.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
276.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
274.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
273.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
273.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
273.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
272.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
272.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
272.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
272.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
270.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
270.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
270.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
269.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
268.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
268.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
268.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
267.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
266.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
265.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
265.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
264.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
264.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
263.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
262.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
262.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
262.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
261.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
261.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
259.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
259.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
258.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
258.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
257.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
253.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
253.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
253.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
252.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
252.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
251.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
250.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
248.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
247.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
246.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
246.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
245.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
244.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
241.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
239.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
239.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
238.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
238.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
236.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
235.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
234.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
234.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
234.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
233.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
232.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
230.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
225.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
225.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
225.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
224.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
223.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
223.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
223.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
222.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
222.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
220.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
220.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
218.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
217.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
216.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
214.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
212.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
211.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
209.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
208.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
208.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
208.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
207.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
206.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
204.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
202.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
200.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
200.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
199.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
197.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
196.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
196.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
195.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
194.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
194.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
189.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
188.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
188.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
188.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
187.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
186.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
184.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
184.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
182.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
182.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
181.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
181.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
181.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
179.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
177.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
176.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
175.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
169.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
167.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
167.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
166.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
164.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
163.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
162.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
161.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
160.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
160.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
160.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
159.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
158.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
156.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
154.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
153.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
152.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
151.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
151.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
151.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
151.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
151.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
149.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
147.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
146.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
144.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
144.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
144.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
142.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
141.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
141.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
139.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
133.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
130.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
130.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
128.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
127.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
125.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
121.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
120.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
119.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
113.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
112.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
111.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
111.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
110.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
104.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
104.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
102.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
99.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
98.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
91.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
90.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
89.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
89.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
87.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
87.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
85.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
75.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
65.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
63.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
60.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
54.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
54.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
53.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
53.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
47.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PGAM1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
383.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
765.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
733.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
713.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
663.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
649.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
648.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
629.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
586.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
580.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
575.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
573.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
566.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
547.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
532.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
527.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
498.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
495.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
487.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
483.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
481.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
452.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
451.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
445.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
442.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
435.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
434.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
430.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
429.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
428.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
423.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
418.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
414.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
412.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
409.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
404.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
402.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
400.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
398.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
396.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
390.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
390.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
389.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
388.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
388.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
385.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
380.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
372.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
372.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
366.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
364.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
364.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
356.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
355.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
355.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
345.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
342.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
338.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
337.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
336.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
335.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
334.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
325.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
325.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
320.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
316.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
314.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
314.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
312.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
307.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
304.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
302.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
301.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
297.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
292.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
289.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
287.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
286.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
286.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
286.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
281.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
280.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
276.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
274.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
273.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
272.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
261.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
261.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
254.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
252.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
250.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
246.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
243.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
243.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
242.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
241.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
230.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
218.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
206.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
157.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PGAM1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
184.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
658.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
621.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
599.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
504.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
483.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
481.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
465.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
455.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
453.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
442.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
437.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
433.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
426.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
423.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
417.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
417.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
416.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
414.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
410.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
407.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
402.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
401.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
401.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
399.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
395.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
392.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
385.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
382.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
381.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
380.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
379.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
377.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
376.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
370.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
368.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
368.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
361.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
361.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
358.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
341.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
339.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
339.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
337.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
334.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
326.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
326.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
325.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
324.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
323.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
311.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
305.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
304.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
298.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
297.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
290.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
290.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
288.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
286.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
283.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
283.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
283.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
280.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
279.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
278.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
278.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
276.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
275.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
275.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
274.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
272.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
272.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
271.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
270.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
270.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
269.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
268.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
266.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
265.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
264.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
262.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
262.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
259.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
259.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
259.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
258.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
258.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
258.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
246.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
245.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
245.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
243.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
242.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
242.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
240.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
238.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
238.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
237.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
236.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
234.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
233.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
232.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
231.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
230.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
230.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
229.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
227.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
227.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
225.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
225.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
224.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
222.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
220.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
219.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
218.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
218.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
217.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
216.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
216.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
216.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
215.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
214.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
214.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
212.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
212.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
212.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
208.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
208.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
208.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
206.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
200.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
200.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
199.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
199.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
198.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
197.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
197.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
192.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
192.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
191.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
190.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
190.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
190.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
188.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
188.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
187.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
184.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
184.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
183.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
182.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
182.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
180.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
176.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
172.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
171.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
168.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
167.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
165.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
165.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
162.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
162.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
161.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
160.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
160.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
159.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
158.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
156.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
155.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
155.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
155.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
154.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
153.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
152.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
150.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
142.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
140.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
136.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
134.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
133.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
131.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
129.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
128.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
127.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
125.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
125.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
124.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
123.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
122.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
121.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
120.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
118.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
116.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
109.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
98.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
95.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
90.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
90.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
88.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
85.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
83.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
82.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
79.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
78.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
76.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
76.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
73.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
59.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
56.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
56.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
48.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
37.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
36.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
26.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
22.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
22.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
18.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
18.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
17.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
15.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
15.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
15.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
15.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
14.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
12.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
11.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
9.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
8.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
8.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
7.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
7.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
6.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
6.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
6.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
6.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
5.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
5.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
3.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
3.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
3.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
2.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
2.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
1.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012370003
Tumor
1.0
CPT0009000003
Tumor
1.0
CPT0021240003
Tumor
0.8
CPT0025110003
Tumor
0.8
CPT0000870016
Tumor
0.8
CPT0012080003
Tumor
0.8
CPT0076330003
Tumor
0.8
CPT0001500009
Tumor
0.8
CPT0079480003
Tumor
0.7
CPT0012280003
Tumor
0.7
CPT0014450004
Tumor
0.7
CPT0006630003
Tumor
0.7
CPT0065810003
Tumor
0.7
CPT0011410003
Tumor
0.7
CPT0065930003
Tumor
0.7
CPT0026410003
Tumor
0.7
CPT0077490003
Tumor
0.7
CPT0025880003
Tumor
0.7
CPT0014370004
Tumor
0.7
CPT0079270003
Tumor
0.6
CPT0025230003
Tumor
0.6
CPT0006440003
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0025580004
Tumor
0.6
CPT0000780007
Tumor
0.6
CPT0077310003
Tumor
0.6
CPT0012550003
Tumor
0.6
CPT0010160003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0019990003
Tumor
0.5
CPT0015810003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0089460004
Tumor
0.5
CPT0006900003
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0011240003
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0012900004
Tumor
0.5
CPT0001220008
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0092160003
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0065750003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0088900003
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0079380003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0089020003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0025290003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0081880003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0078510003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0075560003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0079180003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0002370001
Normal
-0.3
CPT0086950003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0018250001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0088970003
Tumor
-0.3
CPT0076350001
Normal
-0.3
CPT0009080003
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0017850003
Tumor
-0.3
CPT0001510001
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0081620001
Normal
-0.4
CPT0079430001
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0012920003
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0092800003
Normal
-0.4
CPT0010120001
Normal
-0.4
CPT0000890001
Normal
-0.4
CPT0069160003
Tumor
-0.4
CPT0023360001
Normal
-0.4
CPT0010170001
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0006950001
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0066520001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0013790003
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0078670001
Normal
-0.4
CPT0092310003
Normal
-0.4
CPT0001550001
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0001350001
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0020130001
Normal
-0.4
CPT0069190001
Normal
-0.4
CPT0088920001
Normal
-0.5
CPT0063640001
Normal
-0.5
CPT0007870001
Normal
-0.5
CPT0079000001
Normal
-0.5
CPT0092740003
Normal
-0.5
CPT0089480003
Normal
-0.5
CPT0017450001
Normal
-0.5
CPT0089040001
Normal
-0.5
CPT0088780001
Normal
-0.5
CPT0001190001
Normal
-0.5
CPT0000790001
Normal
-0.5
CPT0006730001
Normal
-0.5
CPT0006530001
Normal
-0.5
CPT0079300001
Normal
-0.5
CPT0086830003
Normal
-0.5
CPT0019160001
Normal
-0.5
CPT0092190003
Normal
-0.5
CPT0088710001
Normal
-0.5
CPT0001230001
Normal
-0.5
CPT0088500001
Normal
-0.5
CPT0088570001
Normal
-0.5
CPT0025060001
Normal
-0.5
CPT0075570001
Normal
-0.5
CPT0078530001
Normal
-0.5
CPT0012290003
Normal
-0.5
CPT0000660001
Normal
-0.6
CPT0088640003
Normal
-0.6
CPT0078660003
Tumor
-0.6
CPT0084590001
Normal
-0.6
CPT0014130001
Normal
-0.6
CPT0065820001
Normal
-0.6
CPT0012180003
Tumor
-0.6
CPT0077320001
Normal
-0.7
CPT0088550004
Tumor
-0.7
CPT0075170001
Normal
-0.7
CPT0001270001
Normal
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.