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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
362.5
nTPM
FANTOM5:
118.1
Scaled Tags Per Million
Allen mouse:
18.8
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
362.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 179.1
1984
Male, age 76, both hemispheres
201.1
2090
Male, age 80, both hemispheres
179.7
2188
Female, age 91, both hemispheres
168.9
2301
Female, age 85, both hemispheres
166.9
Dorsal cochlear nucleus nTPM: 213.9
2802
Male, age 74, right hemisphere
246.6
2058
Male, age 76, both hemispheres
233.4
2187
Female, age 91, both hemispheres
221.5
2370
Male, age 61, both hemispheres
200.5
2378
Male, age 80, both hemispheres
167.6
Dorsal tegmental nucleus nTPM: 227.3
2083
Male, age 80, both hemispheres
261.2
2326
Male, age 74, both hemispheres
229.7
1936
Male, age 76, left hemisphere
210.0
2358
Male, age 61, both hemispheres
208.4
Dorsolateral tegmental area nTPM: 233.1
2751
Female, age 85, both hemispheres
273.5
2654
Male, age 80, both hemispheres
262.5
2141
Male, age 76, both hemispheres
241.9
2360
Male, age 74, both hemispheres
224.0
2337
Male, age 61, both hemispheres
163.5
Kolliker-Fuse nucleus nTPM: 223.2
2163
Male, age 80, both hemispheres
291.5
2315
Male, age 76, right hemisphere
230.7
2793
Female, age 91, left hemisphere
147.3
Lateral lemniscal nuclei nTPM: 209.7
2169
Male, age 76, both hemispheres
248.2
2036
Male, age 80, both hemispheres
226.0
2453
Male, age 74, right hemisphere
219.7
2746
Female, age 85, left hemisphere
217.2
2320
Female, age 91, left hemisphere
137.6
Lateral parabrachial nucleus nTPM: 206.6
2139
Female, age 85, right hemisphere
253.0
2790
Male, age 61, both hemispheres
210.8
2013
Male, age 80, both hemispheres
204.3
2792
Male, age 76, both hemispheres
158.5
Lateral vestibular nucleus nTPM: 234.7
2184
Male, age 76, both hemispheres
268.2
2311
Male, age 80, both hemispheres
201.1
Locus coeruleus nTPM: 362.5
2123
Female, age 91, both hemispheres
473.8
2014
Male, age 55, unknown
421.7
1980
Male, age 76, both hemispheres
352.1
2317
Female, age 72, unknown
351.0
2720
Male, age 74, both hemispheres
337.9
2788
Male, age 74, unknown
305.2
2162
Male, age 80, both hemispheres
296.2
Medial parabrachial nucleus nTPM: 237.7
2170
Female, age 91, both hemispheres
272.9
2463
Female, age 85, right hemisphere
250.7
2156
Male, age 61, both hemispheres
232.0
2786
Male, age 76, both hemispheres
221.3
2854
Male, age 80, both hemispheres
211.5
Medial periolivary nuclei nTPM: 218.5
2171
Female, age 85, both hemispheres
288.1
2063
Male, age 76, both hemispheres
287.6
2791
Male, age 74, right hemisphere
228.2
2081
Male, age 80, both hemispheres
153.1
2458
Female, age 91, both hemispheres
135.3
Motor facial nucleus nTPM: 210.1
2062
Male, age 76, both hemispheres
307.7
2365
Male, age 74, right hemisphere
231.4
2126
Male, age 61, both hemispheres
213.7
2795
Female, age 91, both hemispheres
197.2
2697
Female, age 85, both hemispheres
160.7
2327
Male, age 80, both hemispheres
150.0
Motor trigeminal nucleus nTPM: 195.6
2309
Male, age 76, both hemispheres
226.1
2335
Male, age 61, both hemispheres
221.9
2079
Male, age 80, both hemispheres
202.2
2560
Male, age 74, both hemispheres
185.7
2321
Female, age 91, both hemispheres
142.0
Nuclei of the trapezoid body nTPM: 248.2
2159
Male, age 61, both hemispheres
338.0
2735
Female, age 85, both hemispheres
285.5
1983
Male, age 76, both hemispheres
277.8
2166
Male, age 80, both hemispheres
178.9
2368
Female, age 91, both hemispheres
160.7
Nucleus raphe magnus nTPM: 240.5
2160
Male, age 61, both hemispheres
396.3
2172
Female, age 85, both hemispheres
265.9
2455
Male, age 74, both hemispheres
255.5
2051
Male, age 76, both hemispheres
202.0
2328
Male, age 80, both hemispheres
173.8
2459
Female, age 91, both hemispheres
149.6
Paramedian reticular nucleus nTPM: 274.7
2057
Male, age 80, both hemispheres
319.3
2050
Female, age 85, both hemispheres
303.1
2313
Male, age 61, both hemispheres
295.6
2052
Male, age 76, both hemispheres
180.9
Pedunculopontine tegmental nucleus nTPM: 255.9
1921
Female, age 85, both hemispheres
288.6
2334
Male, age 80, both hemispheres
273.9
2338
Male, age 61, both hemispheres
205.1
Pontine nuclei nTPM: 257.6
2727
Male, age 61, right hemisphere
392.0
1863
Male, age 55, unknown
340.4
2787
Female, age 85, both hemispheres
301.6
2109
Female, age 72, unknown
272.4
1968
Male, age 76, left hemisphere
247.6
2454
Male, age 74, left hemisphere
192.8
2115
Male, age 80, left hemisphere
159.9
2319
Female, age 91, both hemispheres
154.1
Pontine raphe nucleus nTPM: 277.4
2122
Female, age 85, midline
283.1
2853
Male, age 76, midline
271.8
Posteroventral cochlear nucleus nTPM: 208.0
2752
Female, age 85, both hemispheres
300.4
2070
Male, age 76, both hemispheres
227.3
2371
Male, age 61, both hemispheres
194.3
2341
Male, age 80, both hemispheres
163.9
2135
Female, age 91, both hemispheres
154.0
Principal sensory trigeminal nucleus nTPM: 228.2
2158
Male, age 61, both hemispheres
321.8
2324
Male, age 76, both hemispheres
234.2
2008
Male, age 80, left hemisphere
220.5
2367
Female, age 91, left hemisphere
136.5
Reticular pontine nucleus, caudal nTPM: 191.3
2092
Male, age 76, both hemispheres
228.2
2559
Male, age 74, both hemispheres
202.5
2332
Male, age 80, right hemisphere
185.6
2457
Female, age 91, both hemispheres
149.0
Reticular pontine nucleus, oral nTPM: 232.2
1939
Male, age 80, both hemispheres
287.0
2012
Female, age 85, both hemispheres
263.4
2167
Male, age 76, both hemispheres
250.0
2361
Male, age 74, both hemispheres
209.6
2366
Female, age 91, both hemispheres
150.8
Reticulotegmental nucleus nTPM: 233.8
2325
Male, age 76, both hemispheres
267.9
2452
Male, age 74, both hemispheres
237.5
2333
Male, age 80, both hemispheres
220.3
2322
Female, age 91, both hemispheres
209.4
Spinal trigeminal nucleus, oral nTPM: 234.9
2737
Female, age 85, both hemispheres
271.5
2164
Male, age 80, both hemispheres
230.4
1978
Male, age 76, both hemispheres
202.8
Subcoeruleus area nTPM: 246.8
2323
Female, age 91, left hemisphere
288.6
2451
Male, age 74, both hemispheres
255.8
1958
Male, age 80, both hemispheres
250.8
2369
Female, age 85, left hemisphere
244.4
2089
Male, age 76, left hemisphere
194.3
Superior olive nTPM: 201.3
1875
Female, age 85, both hemispheres
261.6
2364
Male, age 74, right hemisphere
240.7
2020
Male, age 76, both hemispheres
204.5
2329
Male, age 80, right hemisphere
156.9
2561
Female, age 91, both hemispheres
142.5
Ventral periolivary nuclei nTPM: 210.7
2165
Male, age 80, both hemispheres
248.7
2130
Female, age 85, both hemispheres
245.4
2023
Male, age 76, both hemispheres
200.1
2794
Female, age 91, left hemisphere
148.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 205.4
2359
Male, age 61, both hemispheres
249.5
2449
Male, age 74, both hemispheres
229.0
2840
Female, age 85, both hemispheres
215.7
1959
Male, age 76, both hemispheres
208.2
2161
Male, age 80, both hemispheres
180.9
2456
Female, age 91, both hemispheres
149.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.