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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Not detected
Neuronal cells:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
230.9
nTPM
HPA Brain:
303.4
nTPM
GTEx:
230.9
nTPM
FANTOM5:
76.1
Scaled Tags Per Million
Mouse:
629.8
nTPM
Allen mouse:
25.8
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA042528
Glial cells
Not detected
Neuronal cells
Medium
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
303.4
Sample id
Sample description
nTPM
Hippocampus nTPM: 241.3
1898
Male, age 80, left hemisphere
383.8
1855
Male, age 76, left hemisphere
240.6
2621
Female, age 67, right hemisphere
219.6
2148
Female, age 91, left hemisphere
208.9
2529
Female, age 94, left hemisphere
206.6
1911
Female, age 85, right hemisphere
188.0
Dentate gyrus nTPM: 235.7
2010
Male, age 76, both hemispheres
309.9
1927
Female, age 91, both hemispheres
268.2
2530
Female, age 94, left hemisphere
263.1
2528
Male, age 74, both hemispheres
224.6
2246
Female, age 85, both hemispheres
204.8
2531
Female, age 67, both hemispheres
143.4
Entorhinal gyrus nTPM: 221.0
2764
Male, age 80, right hemisphere
294.5
1938
Female, age 85, left hemisphere
250.3
1787
Male, age 76, left hemisphere
210.9
2117
Female, age 91, right hemisphere
210.7
2613
Female, age 94, left hemisphere
204.1
2686
Male, age 75, right hemisphere
155.7
Hippocampus, CA1 nTPM: 303.4
2749
Male, age 80, left hemisphere
559.1
1873
Female, age 85, both hemispheres
278.6
2527
Male, age 74, both hemispheres
256.9
2045
Male, age 76, both hemispheres
213.2
2082
Female, age 91, right hemisphere
208.9
Hippocampus, CA2 nTPM: 267.2
1963
Male, age 80, left hemisphere
399.2
1892
Male, age 76, both hemispheres
323.6
2249
Male, age 74, both hemispheres
265.8
2437
Female, age 94, left hemisphere
218.2
2113
Female, age 91, right hemisphere
199.3
1940
Female, age 85, left hemisphere
197.0
Hippocampus, CA3 nTPM: 246.8
2137
Male, age 80, left hemisphere
342.2
2436
Male, age 74, both hemispheres
314.3
1867
Male, age 76, both hemispheres
281.2
1891
Female, age 85, both hemispheres
198.2
2620
Female, age 94, left hemisphere
179.0
2861
Female, age 67, both hemispheres
166.0
Parahippocampal cortex nTPM: 232.7
1850
Male, age 80, both hemispheres
297.1
2250
Female, age 67, right hemisphere
258.1
1933
Female, age 85, both hemispheres
254.0
1990
Female, age 91, right hemisphere
248.6
2245
Female, age 91, both hemispheres
245.5
2018
Male, age 76, both hemispheres
244.9
2532
Female, age 72, left hemisphere
212.3
2693
Female, age 94, both hemispheres
196.6
2622
Female, age 67, right hemisphere
185.3
2692
Male, age 74, both hemispheres
184.6
Perirhinal gyrus nTPM: 278.2
1847
Female, age 91, left hemisphere
331.6
1794
Male, age 80, right hemisphere
325.7
1841
Female, age 85, right hemisphere
277.5
2521
Female, age 94, right hemisphere
248.7
2848
Male, age 76, right hemisphere
207.5
Subiculum nTPM: 212.6
1901
Male, age 80, both hemispheres
256.0
1977
Female, age 85, both hemispheres
255.8
2619
Male, age 74, both hemispheres
199.7
2438
Female, age 94, left hemisphere
192.8
2729
Female, age 91, right hemisphere
190.3
2042
Male, age 76, both hemispheres
181.0
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
230.9
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 230.9
Samples: 197
Max nTPM: 448.9
Min nTPM: 93.3
Std nTPM: 82.4
Median nTPM: 213.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
448.9
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
427.3
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
421.0
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
410.5
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
408.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
405.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
403.4
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
399.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
388.7
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
388.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
382.1
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
375.0
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
373.8
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
371.6
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
370.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
367.2
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
359.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
357.9
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
352.9
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
350.4
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
346.7
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
345.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
340.4
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
339.3
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
338.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
337.4
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
335.2
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
334.0
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
333.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
329.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
328.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
328.1
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
327.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
324.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
323.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
322.0
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
321.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
318.9
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
317.9
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
317.8
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
317.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
315.3
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
314.5
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
314.0
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
312.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
307.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
294.0
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
293.0
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
292.1
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
291.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
291.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
288.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
284.2
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
281.1
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
277.6
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
276.3
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
271.9
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
269.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
269.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
265.1
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
261.4
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
260.4
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
258.4
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
256.6
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
255.6
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
255.6
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
254.1
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
253.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
248.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
248.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
247.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
247.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
246.7
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
245.2
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
243.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
241.5
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
240.4
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
239.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
238.0
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
237.0
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
234.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
234.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
232.9
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
230.0
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
229.8
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
228.9
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
228.5
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
226.6
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
226.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
224.2
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
220.8
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
220.4
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
220.0
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
219.4
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
218.1
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
216.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
215.9
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
214.1
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
213.3
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
210.3
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
208.6
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
207.5
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
206.9
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
206.8
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
206.6
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
206.0
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
205.8
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
205.2
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
204.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
203.5
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
202.4
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
201.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
200.7
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
200.4
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
200.3
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
199.4
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
197.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
196.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
195.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
194.5
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
193.9
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
193.9
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
193.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
193.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
192.8
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
192.0
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
191.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
191.6
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
191.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
188.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
187.3
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
185.6
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
185.5
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
185.2
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
184.9
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
182.9
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
182.1
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
182.1
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
179.7
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
177.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
177.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
176.8
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
176.8
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
174.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
174.1
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
173.9
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
173.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
173.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
172.2
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
165.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
164.0
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
164.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
159.3
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
158.0
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
157.2
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
156.8
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
156.3
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
153.2
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
151.6
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
150.8
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
148.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
148.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
147.0
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
147.0
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
146.7
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
143.7
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
143.6
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
143.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
141.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
141.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
138.4
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
138.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
137.9
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
137.5
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
137.0
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
136.4
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
134.5
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
132.0
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
129.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
127.5
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
125.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
124.1
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
123.3
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
121.9
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
120.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
120.7
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
119.7
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
118.5
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
114.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
113.5
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
113.0
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
108.5
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
108.3
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
105.7
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
103.0
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
101.7
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
93.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
629.8
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 614.2
Samples: 4
Max nTPM: 669.7
Min nTPM: 560.5
Sample A
Male
560.5
Sample B
Male
621.2
Sample C
Female
605.5
Sample D
Female
669.7
Hippocampal formation nTPM: 629.8
Samples: 4
Max nTPM: 656.9
Min nTPM: 601.8
Sample A
Male
656.9
Sample B
Male
601.8
Sample C
Female
643.5
Sample D
Female
616.8
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.