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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
253.1
nTPM
HPA Brain:
237.8
nTPM
GTEx:
253.1
nTPM
FANTOM5:
48.9
Scaled Tags Per Million
Mouse:
619.5
nTPM
Allen mouse:
28.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
237.8
Sample id
Sample description
nTPM
Amygdala nTPM: 237.8
2814
Male, age 76, right hemisphere
291.9
2695
Female, age 67, right hemisphere
258.0
1987
Female, age 91, left hemisphere
228.5
2514
Male, age 75, right hemisphere
214.5
2517
Female, age 94, left hemisphere
195.9
Basal amygdala nTPM: 195.2
2110
Male, age 80, left hemisphere
230.8
2609
Male, age 75, right hemisphere
227.3
2243
Female, age 91, right hemisphere
218.0
1955
Male, age 76, both hemispheres
207.7
2685
Female, age 94, left hemisphere
177.3
2827
Female, age 67, right hemisphere
110.3
Central amygdala nTPM: 234.1
1905
Male, age 76, both hemispheres
293.3
2515
Male, age 75, right hemisphere
238.5
2239
Male, age 80, left hemisphere
227.4
2826
Female, age 94, left hemisphere
220.7
2701
Female, age 91, right hemisphere
190.3
Corticomedial amygdala nTPM: 205.6
2829
Male, age 80, left hemisphere
260.5
2428
Male, age 75, right hemisphere
234.4
2242
Female, age 91, right hemisphere
218.9
2429
Female, age 94, left hemisphere
201.5
2240
Male, age 76, both hemispheres
183.3
2535
Female, age 67, right hemisphere
134.9
Lateral amygdala nTPM: 203.8
1883
Male, age 76, both hemispheres
280.5
2516
Male, age 75, right hemisphere
237.3
2534
Female, age 94, left hemisphere
232.7
2255
Female, age 91, right hemisphere
187.9
2256
Male, age 80, left hemisphere
154.6
2830
Female, age 67, right hemisphere
129.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
253.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 253.1
Samples: 152
Max nTPM: 571.1
Min nTPM: 106.5
Std nTPM: 79.5
Median nTPM: 241.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
571.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
528.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
505.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
430.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
422.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
414.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
413.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
406.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
404.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
396.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
370.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
363.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
359.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
353.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
351.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
350.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
348.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
346.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
345.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
345.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
342.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
332.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
330.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
329.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
325.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
318.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
312.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
311.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
309.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
307.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
306.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
305.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
304.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
298.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
294.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
292.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
291.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
291.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
289.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
288.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
287.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
287.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
284.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
282.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
281.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
280.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
278.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
278.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
278.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
278.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
277.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
277.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
275.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
272.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
272.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
271.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
269.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
268.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
268.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
267.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
267.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
266.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
265.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
264.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
264.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
264.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
263.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
261.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
258.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
251.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
248.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
246.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
245.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
245.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
243.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
242.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
240.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
239.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
238.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
237.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
236.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
235.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
234.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
234.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
232.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
231.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
229.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
228.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
226.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
225.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
225.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
222.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
221.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
220.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
220.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
218.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
217.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
216.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
216.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
215.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
215.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
214.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
212.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
211.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
211.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
208.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
208.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
206.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
201.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
201.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
200.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
200.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
199.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
197.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
196.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
189.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
188.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
188.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
185.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
185.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
184.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
183.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
182.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
181.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
181.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
180.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
180.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
178.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
176.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
176.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
176.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
175.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
171.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
167.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
166.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
165.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
164.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
162.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
161.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
160.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
158.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
155.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
153.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
148.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
143.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
143.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
140.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
139.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
129.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
128.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
119.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
106.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
619.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 619.6
Samples: 4
Max nTPM: 648.2
Min nTPM: 599.5
Sample A
Male
648.2
Sample B
Male
608.9
Sample C
Female
621.6
Sample D
Female
599.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.