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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EXOSC1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
80.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
47.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
40.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
30.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
30.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
26.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
26.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
25.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
20.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
20.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
19.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
19.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
19.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
17.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
16.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
16.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
16.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
14.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
14.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
14.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
13.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
13.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
12.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
12.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
11.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
11.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
10.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
10.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
9.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
8.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
8.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
8.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
7.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
7.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
6.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
6.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
4.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EXOSC1 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
61.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
56.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
50.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
50.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
44.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
40.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
38.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
38.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
37.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
37.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
37.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
35.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
35.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
34.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
34.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
34.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
34.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
33.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
33.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
33.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
33.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
33.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
33.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
32.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
32.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
32.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
32.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
32.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
32.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
31.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
31.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
30.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
30.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
30.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
30.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
30.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
30.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
30.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
30.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
30.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
30.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
30.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
30.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
30.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
29.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
29.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
29.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
29.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
29.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
29.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
29.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
29.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
29.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
29.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
29.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
29.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
29.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
29.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
29.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
29.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
29.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
28.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
28.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
28.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
28.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
28.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
28.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
28.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
28.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
28.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
28.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
28.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
28.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
28.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
28.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
28.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
28.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
27.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
27.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
27.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
27.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
27.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
27.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
27.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
27.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
27.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
27.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
27.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
27.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
27.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
26.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
26.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
26.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
26.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
26.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
26.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
26.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
26.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
26.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
26.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
26.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
26.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
26.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
26.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
26.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
26.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
26.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
26.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
26.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
26.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
26.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
26.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
26.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
26.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
26.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
25.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
25.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
25.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
25.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
25.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
25.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
25.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
25.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
25.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
25.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
25.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
25.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
25.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
25.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
25.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
25.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
25.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
25.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
25.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
25.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
25.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
25.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
25.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
25.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
25.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
25.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
25.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
25.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
25.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
25.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
25.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
24.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
24.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
24.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
24.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
24.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
24.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
24.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
24.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
24.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
24.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
24.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
24.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
24.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
24.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
24.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
24.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
24.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
24.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
24.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
24.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
24.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
24.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
24.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
24.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
24.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
24.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
24.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
24.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
23.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
23.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
23.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
23.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
23.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
23.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
23.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
23.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
23.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
23.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
23.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
23.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
23.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
23.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
23.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
23.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
23.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
23.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
23.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
23.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
23.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
23.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
23.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
23.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
23.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
23.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
23.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
23.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
23.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
23.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
23.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
23.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
23.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
23.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
22.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
22.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
22.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
22.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
22.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
22.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
22.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
22.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
22.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
22.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
22.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
22.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
22.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
22.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
22.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
22.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
22.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
22.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
22.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
22.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
22.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
22.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
22.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
22.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
22.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
22.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
22.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
22.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
22.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
22.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
22.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
22.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
22.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
22.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
22.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
22.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
22.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
22.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
21.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
21.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
21.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
21.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
21.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
21.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
21.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
21.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
21.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
21.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
21.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
21.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
21.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
21.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
21.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
21.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
21.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
21.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
21.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
21.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
21.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
21.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
21.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
21.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
21.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
21.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
21.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
21.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
21.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
21.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
21.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
21.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
20.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
20.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
20.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
20.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
20.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
20.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
20.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
20.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
20.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
20.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
20.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
20.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
20.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
20.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
20.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
20.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
20.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
20.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
20.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
20.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
20.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
20.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
20.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
20.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
20.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
20.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
20.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
20.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
20.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
20.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
20.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
20.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
20.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
20.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
20.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
20.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
20.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
20.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
20.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
20.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
19.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
19.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
19.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
19.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
19.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
19.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
19.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
19.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
19.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
19.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
19.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
19.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
19.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
19.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
19.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
19.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
19.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
19.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
19.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
19.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
19.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
19.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
19.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
19.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
19.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
19.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
19.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
19.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
19.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
19.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
19.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
19.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
19.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
19.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
19.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
18.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
18.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
18.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
18.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
18.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
18.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
18.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
18.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
18.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
18.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
18.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
18.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
18.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
18.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
18.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
18.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
18.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
18.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
18.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
18.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
18.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
18.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
18.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
18.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
17.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
17.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
17.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
17.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
17.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
17.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
17.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
17.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
17.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
17.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
17.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
17.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
17.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
17.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
17.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
16.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
16.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
16.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
16.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
16.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
16.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
16.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
16.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
16.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
16.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
16.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
15.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
15.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
15.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
15.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
14.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
14.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
14.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
13.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
13.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
13.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
13.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
13.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
12.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
12.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
12.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
11.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
11.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
11.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
11.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
10.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
10.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
8.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EXOSC1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
73.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
39.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
38.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
38.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
34.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
32.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
31.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
30.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
30.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
29.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
29.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
28.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
28.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
27.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
27.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
27.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
27.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
26.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
26.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
25.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
25.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
25.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
25.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
25.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
24.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
24.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
24.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
24.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
24.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
24.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
24.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
24.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
24.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
23.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
23.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
22.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
22.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
22.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
22.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
22.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
22.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
22.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
21.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
21.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
21.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
21.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
20.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
20.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
20.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
20.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
20.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
19.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
19.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
19.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
19.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
19.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
19.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
19.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
18.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
18.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
18.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
18.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
18.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
18.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
17.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
17.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
17.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
17.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
17.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
17.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
16.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
16.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
15.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
14.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
13.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EXOSC1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
76.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
68.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
65.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
64.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
62.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
60.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
58.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
57.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
55.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
55.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
54.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
54.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
53.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
52.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
52.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
51.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
50.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
49.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
49.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
47.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
47.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
47.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
47.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
46.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
46.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
45.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
43.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
43.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
43.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
41.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
41.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
41.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
41.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
40.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
40.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
40.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
40.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
40.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
40.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
40.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
39.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
39.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
39.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
39.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
38.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
38.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
38.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
38.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
37.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
37.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
37.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
37.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
37.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
37.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
36.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
36.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
36.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
36.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
36.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
36.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
36.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
36.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
36.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
36.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
36.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
35.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
35.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
35.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
35.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
35.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
35.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
35.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
35.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
35.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
34.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
34.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
34.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
34.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
34.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
34.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
34.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
34.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
34.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
34.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
33.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
33.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
33.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
33.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
33.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
33.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
33.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
33.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
33.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
32.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
32.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
32.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
32.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
32.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
32.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
32.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
32.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
32.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
32.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
32.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
32.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
31.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
31.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
31.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
31.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
31.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
31.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
31.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
31.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
31.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
31.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
31.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
31.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
30.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
30.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
30.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
30.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
30.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
30.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
30.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
30.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
30.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
30.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
30.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
30.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
30.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
30.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
30.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
30.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
29.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
29.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
29.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
29.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
29.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
29.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
29.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
29.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
29.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
29.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
29.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
29.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
29.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
29.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
29.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
29.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
29.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
29.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
29.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
29.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
28.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
28.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
28.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
28.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
28.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
28.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
28.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
28.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
28.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
27.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
27.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
27.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
27.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
27.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
27.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
27.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
27.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
26.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
26.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
26.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
26.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
26.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
26.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
26.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
25.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
25.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
25.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
25.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
25.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
25.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
25.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
25.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
25.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
25.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
25.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
25.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
25.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
25.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
25.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
24.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
24.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
24.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
24.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
24.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
24.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
24.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
24.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
24.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
24.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
24.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
24.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
23.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
23.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
23.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
23.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
23.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
23.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
23.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
23.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
23.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
23.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
23.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
23.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
22.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
22.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
22.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
22.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
22.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
22.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
22.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
22.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
22.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
22.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
21.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
21.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
21.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
21.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
21.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
20.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
20.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
20.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
20.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
20.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
20.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
20.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
20.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
19.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
17.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
16.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
16.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
16.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
16.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
15.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
15.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
14.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
14.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
14.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
13.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
12.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
11.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
11.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
9.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
9.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
8.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
7.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
7.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0017850003
Tumor
0.6
CPT0012640003
Normal
0.6
CPT0024670003
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0086870003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0001540009
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0017410003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0075170001
Normal
0.3
CPT0078660003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0009000003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0088900003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0065820001
Normal
0.2
CPT0081600003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0088630003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0026410003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0018250001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0069160003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0006530001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0069190001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0089040001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0079430001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0065450001
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0025290003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0065870003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0087050003
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0081880003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0002270011
Tumor
-0.4
CPT0086030003
Tumor
-0.4
CPT0077310003
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0082010001
Normal
-0.4
CPT0015730003
Tumor
-0.5
CPT0006630003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
