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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
14.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
2.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
1.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
1.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CDH2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
117.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
100.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
95.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
81.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
80.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
79.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
79.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
78.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
75.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
73.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
73.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
72.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
72.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
72.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
72.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
71.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
70.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
70.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
69.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
69.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
69.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
69.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
68.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
68.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
68.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
66.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
66.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
65.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
65.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
65.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
64.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
64.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
63.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
63.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
63.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
63.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
63.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
62.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
62.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
62.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
61.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
61.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
61.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
61.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
60.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
60.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
60.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
60.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
59.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
58.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
58.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
58.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
58.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
57.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
57.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
57.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
57.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
56.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
56.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
56.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
55.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
55.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
55.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
55.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
55.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
54.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
54.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
54.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
54.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
54.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
54.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
54.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
53.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
53.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
53.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
53.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
52.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
52.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
52.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
52.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
52.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
52.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
52.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
52.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
52.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
52.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
51.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
50.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
50.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
50.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
50.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
50.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
49.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
49.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
49.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
49.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
48.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
48.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
48.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
48.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
48.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
48.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
48.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
47.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
47.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
47.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
47.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
47.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
47.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
47.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
47.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
47.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
47.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
46.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
46.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
46.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
46.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
46.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
46.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
46.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
46.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
45.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
45.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
45.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
44.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
44.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
44.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
44.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
44.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
44.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
44.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
44.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
44.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
43.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
43.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
43.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
43.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
43.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
43.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
43.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
43.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
42.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
42.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
42.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
42.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
42.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
41.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
41.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
41.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
41.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
41.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
41.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
41.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
41.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
41.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
41.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
41.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
41.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
40.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
40.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
40.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
40.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
40.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
40.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
40.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
40.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
40.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
39.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
39.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
39.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
39.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
39.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
39.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
39.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
39.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
39.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
39.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
39.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
39.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
39.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
38.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
38.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
38.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
38.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
38.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
38.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
38.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
38.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
38.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
38.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
38.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
38.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
38.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
38.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
38.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
38.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
37.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
37.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
37.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
37.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
37.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
37.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
37.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
37.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
37.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
37.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
37.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
37.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
37.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
37.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
36.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
36.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
36.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
36.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
36.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
36.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
36.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
36.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
36.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
36.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
36.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
36.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
35.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
35.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
35.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
35.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
35.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
35.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
35.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
35.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
35.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
35.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
35.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
35.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
35.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
34.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
34.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
34.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
34.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
34.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
34.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
34.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
34.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
34.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
34.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
34.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
34.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
34.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
33.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
33.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
33.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
33.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
33.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
33.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
33.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
33.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
33.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
32.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
32.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
32.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
32.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
32.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
32.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
32.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
32.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
32.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
32.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
32.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
32.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
32.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
31.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
31.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
31.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
31.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
31.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
31.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
30.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
30.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
30.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
30.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
30.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
30.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
30.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
30.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
30.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
30.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
29.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
29.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
29.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
29.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
29.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
29.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
29.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
29.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
29.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
29.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
29.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
29.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
29.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
29.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
28.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
28.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
28.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
28.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
28.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
28.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
28.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
27.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
27.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
27.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
27.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
27.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
27.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
27.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
26.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
26.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
26.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
26.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
26.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
26.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
26.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
26.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
26.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
25.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
25.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
25.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
25.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
25.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
25.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
25.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
25.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
25.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
25.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
25.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
24.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
24.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
24.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
24.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
23.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
23.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
23.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
23.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
23.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
23.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
23.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
23.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
22.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
22.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
22.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
22.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
22.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
22.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
22.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
22.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
22.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
22.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
22.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
22.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
22.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
22.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
22.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
21.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
21.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
21.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
21.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
21.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
21.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
21.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
21.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
21.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
20.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
20.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
20.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
20.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
19.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
19.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
19.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
19.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
19.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
19.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
19.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
19.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
18.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
18.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
18.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
18.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
18.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
18.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
17.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
17.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
17.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
17.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
16.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
16.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
16.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
16.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
16.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
15.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
15.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
13.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
13.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
13.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
12.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
10.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
6.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
6.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
3.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
2.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
2.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
2.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
2.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
2.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
2.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
1.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
0.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
0.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
0.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CDH2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
211.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
124.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
109.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
87.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
80.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
76.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
74.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
74.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
71.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
68.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
64.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
63.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
63.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
61.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
60.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
59.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
58.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
57.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
57.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
56.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
56.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
56.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
56.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
56.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
56.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
54.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
53.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
53.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
53.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
52.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
51.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
50.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
50.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
48.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
48.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
48.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
48.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
47.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
47.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
46.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
45.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
45.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
44.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
44.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
43.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
43.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
43.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
43.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
42.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
42.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
41.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
41.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
41.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
41.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
39.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
39.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
39.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
38.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
37.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
37.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
36.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
36.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
36.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
35.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
35.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
35.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
34.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
34.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
32.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
32.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
32.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
31.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
30.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
30.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
30.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
30.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
28.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
28.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
28.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
27.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
27.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
27.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
26.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
25.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
23.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
22.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
21.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
21.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
20.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
17.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
11.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CDH2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
234.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
171.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
142.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
140.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
132.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
129.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
126.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
114.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
104.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
99.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
97.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
94.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
93.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
93.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
91.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
87.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
81.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
80.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
79.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
78.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
78.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
76.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
76.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
74.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
74.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
73.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
73.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
73.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
72.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
72.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
70.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
69.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
68.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
66.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
66.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
63.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
62.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
62.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
62.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
61.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
61.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
59.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
59.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
58.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
58.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
57.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
55.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
54.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
54.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
54.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
54.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
52.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
52.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
51.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
50.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
49.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
49.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
48.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
48.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
48.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
48.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
48.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
48.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
47.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
47.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
46.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
46.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
46.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
45.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
45.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
45.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
44.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
44.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
44.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
43.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
43.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
43.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
42.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
42.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
41.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
41.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
41.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
41.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
40.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
40.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
40.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
40.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
39.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
39.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
39.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
39.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
39.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
38.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
38.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
38.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
38.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
38.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
37.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
37.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
37.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
37.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
37.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
37.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
37.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
36.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
36.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
36.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
36.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
36.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
35.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
35.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
35.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
34.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
34.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
34.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
34.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
33.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
33.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
33.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
33.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
33.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
32.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
32.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
32.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
32.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
32.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
32.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
32.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
32.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
31.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
31.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
31.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
31.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
31.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
31.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
31.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
31.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
31.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
30.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
30.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
30.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
30.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
30.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
29.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
29.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
29.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
28.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
28.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
28.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
27.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
27.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
26.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
26.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
26.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
26.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
26.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
26.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
25.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
25.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
25.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
25.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
24.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
24.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
24.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
24.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
24.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
24.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
24.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
24.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
24.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
23.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
23.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
23.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
23.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
23.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
23.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
22.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
22.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
22.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
21.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
21.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
21.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
21.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
20.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
20.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
20.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
20.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
20.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
19.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
19.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
19.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
19.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
18.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
18.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
18.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
18.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
18.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
17.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
17.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
17.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
17.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
17.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
17.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
16.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
16.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
16.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
15.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
15.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
15.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
14.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
14.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
12.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
10.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
10.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
9.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
7.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
5.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
5.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
3.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
1.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
0.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0092800003
Normal
0.9
CPT0065450001
Normal
0.9
CPT0089480003
Normal
0.7
CPT0000790001
Normal
0.7
CPT0012770003
Normal
0.7
CPT0077140001
Normal
0.7
CPT0066430001
Normal
0.7
CPT0012550003
Tumor
0.6
CPT0026420001
Normal
0.6
CPT0000640003
Tumor
0.6
CPT0092310003
Normal
0.6
CPT0006730001
Normal
0.6
CPT0006950001
Normal
0.5
CPT0087040003
Tumor
0.5
CPT0078800003
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0092740003
Normal
0.5
CPT0088710001
Normal
0.5
CPT0025060001
Normal
0.5
CPT0010170001
Normal
0.5
CPT0077500001
Normal
0.5
CPT0001350001
Normal
0.5
CPT0025580004
Tumor
0.5
CPT0023710001
Normal
0.5
CPT0087050003
Normal
0.4
CPT0011410003
Tumor
0.4
CPT0077310003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0023360001
Normal
0.4
CPT0078840001
Normal
0.4
CPT0014350001
Normal
0.4
CPT0076350001
Normal
0.4
CPT0013790003
Normal
0.4
CPT0020020001
Normal
0.4
CPT0088480003
Tumor
0.4
CPT0020130001
Normal
0.4
CPT0007470001
Normal
0.3
CPT0012290003
Normal
0.3
CPT0088780001
Normal
0.3
CPT0006900003
Tumor
0.3
CPT0012090003
Normal
0.3
CPT0069010001
Normal
0.3
CPT0081620001
Normal
0.3
CPT0001220008
Tumor
0.3
CPT0012570003
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0086970003
Normal
0.3
CPT0088920001
Normal
0.3
CPT0089020003
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0082010001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0086370003
Normal
0.2
CPT0015730003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0065690003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0000890001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0079000001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0086950003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0069160003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0001180009
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0009080003
Normal
-0.2
CPT0084560003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0025050003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0006440003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0015810003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0092290003
Tumor
-0.3
CPT0012280003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0077110003
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0009020003
Normal
-0.3
CPT0023350003
Tumor
-0.4
CPT0012900004
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0026410003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0020120003
Tumor
-0.4
CPT0010120001
Normal
-0.5
CPT0069190001
Normal
-0.5
CPT0012920003
Normal
-0.5
CPT0012180003
Tumor
-0.5
CPT0009060003
Tumor
-0.5
CPT0007320003
Tumor
-0.5
CPT0079410003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0081990003
Tumor
-0.5
CPT0014470001
Normal
-0.6
CPT0092730003
Tumor
-0.6
CPT0075560003
Tumor
-0.6
CPT0075170001
Normal
-0.6
CPT0079230003
Tumor
-0.7
CPT0011240003
Tumor
-0.7
CPT0076330003
Tumor
-0.7
CPT0012640003
Normal
-0.8
CPT0001270001
Normal
-0.8
CPT0065430003
Tumor
-0.8
CPT0077320001
Normal
-0.9
CPT0086820003
Tumor
-0.9
CPT0079300001
Normal
-0.9
CPT0086870003
Tumor
-1.0
CPT0084590001
Normal
-1.0
CPT0079510001
Normal
-1.0
CPT0092190003
Normal
-1.1
CPT0081880003
Tumor
-1.3
CPT0017850003
Tumor
-1.4
CPT0017410003
Tumor
-1.4
CPT0079180003
Tumor
-1.8
CPT0001340003
Tumor
-1.9
CPT0088550004
Tumor
-2.0
CPT0078660003
Tumor
-2.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
