HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:45.7 nTPM
HPA Brain:153.7 nTPM
GTEx:45.7 nTPM
FANTOM5:191.4 Scaled Tags Per Million
Pig:13.1 nTPM
Mouse:16.3 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB020795
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 153.7
Sample id Sample description nTPM
Hippocampus
nTPM: 149.4
1855 Male, age 76, left hemisphere 189.5
2148 Female, age 91, left hemisphere 160.1
1898 Male, age 80, left hemisphere 144.9
1911 Female, age 85, right hemisphere 140.9
2621 Female, age 67, right hemisphere 131.2
2529 Female, age 94, left hemisphere 129.8
Dentate gyrus
nTPM: 153.7
2528 Male, age 74, both hemispheres 190.1
2010 Male, age 76, both hemispheres 188.8
2246 Female, age 85, both hemispheres 157.6
2531 Female, age 67, both hemispheres 143.7
1927 Female, age 91, both hemispheres 123.4
2530 Female, age 94, left hemisphere 118.8
Entorhinal gyrus
nTPM: 132.2
2117 Female, age 91, right hemisphere 163.8
1787 Male, age 76, left hemisphere 155.5
2686 Male, age 75, right hemisphere 140.9
2613 Female, age 94, left hemisphere 119.5
2764 Male, age 80, right hemisphere 112.1
1938 Female, age 85, left hemisphere 101.7
Hippocampus, CA1
nTPM: 153.2
2045 Male, age 76, both hemispheres 170.5
2527 Male, age 74, both hemispheres 161.2
2082 Female, age 91, right hemisphere 151.8
1873 Female, age 85, both hemispheres 144.2
2749 Male, age 80, left hemisphere 138.3
Hippocampus, CA2
nTPM: 141.1
1940 Female, age 85, left hemisphere 190.5
2249 Male, age 74, both hemispheres 170.2
2113 Female, age 91, right hemisphere 147.8
1963 Male, age 80, left hemisphere 129.1
2437 Female, age 94, left hemisphere 109.1
1892 Male, age 76, both hemispheres 100.0
Hippocampus, CA3
nTPM: 141.1
2861 Female, age 67, both hemispheres 163.9
2620 Female, age 94, left hemisphere 158.4
1867 Male, age 76, both hemispheres 133.6
2137 Male, age 80, left hemisphere 132.6
1891 Female, age 85, both hemispheres 132.1
2436 Male, age 74, both hemispheres 126.1
Parahippocampal cortex
nTPM: 128.2
2018 Male, age 76, both hemispheres 180.1
2692 Male, age 74, both hemispheres 142.6
2693 Female, age 94, both hemispheres 139.6
2250 Female, age 67, right hemisphere 138.8
1850 Male, age 80, both hemispheres 126.7
2245 Female, age 91, both hemispheres 120.4
1933 Female, age 85, both hemispheres 120.2
2532 Female, age 72, left hemisphere 109.3
1990 Female, age 91, right hemisphere 103.7
2622 Female, age 67, right hemisphere 100.5
Perirhinal gyrus
nTPM: 122.0
2521 Female, age 94, right hemisphere 190.1
1847 Female, age 91, left hemisphere 116.8
1794 Male, age 80, right hemisphere 112.6
2848 Male, age 76, right hemisphere 100.5
1841 Female, age 85, right hemisphere 89.9
Subiculum
nTPM: 141.9
2729 Female, age 91, right hemisphere 197.2
2042 Male, age 76, both hemispheres 194.6
1901 Male, age 80, both hemispheres 133.2
2619 Male, age 74, both hemispheres 127.2
1977 Female, age 85, both hemispheres 100.7
2438 Female, age 94, left hemisphere 98.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 45.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.7
Samples: 197

Max nTPM: 189.3
Min nTPM: 14.0
Std nTPM: 26.5
Median nTPM: 37.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 189.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 158.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 148.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 145.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 127.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 126.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 120.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 112.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 111.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 108.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 94.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 191.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 191.4
FF:10169-103B7 60 years, female 228.4
FF:10153-102I9 76 years, female 154.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.1
Pig sample Sample description nTPM
Subiculum
nTPM: 8.8
Samples: 4

Max nTPM: 9.3
Min nTPM: 7.8
Sample A Female 9.3
Sample B Female 7.8
Sample C Male 9.0
Sample D Male 8.9
Dorsal hippocampus
nTPM: 11.7
Samples: 4

Max nTPM: 13.5
Min nTPM: 9.1
Sample A Female 13.5
Sample B Female 12.8
Sample C Male 9.1
Sample D Male 11.4
Entorhinal cortex
nTPM: 12.2
Samples: 4

Max nTPM: 14.0
Min nTPM: 9.7
Sample A Female 14.0
Sample B Female 12.5
Sample C Male 9.7
Sample D Male 12.5
Ventral hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 15.8
Min nTPM: 8.5
Sample A Female 15.8
Sample B Female 8.5
Sample C Male 13.4
Sample D Male 14.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 16.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 10.3
Min nTPM: 9.4
Sample A Male 9.9
Sample B Male 10.3
Sample C Female 9.9
Sample D Female 9.4
Hippocampal formation
nTPM: 16.3
Samples: 4

Max nTPM: 21.0
Min nTPM: 12.4
Sample A Male 12.4
Sample B Male 18.3
Sample C Female 21.0
Sample D Female 13.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
74657950 Antisense, RP_060220_02_F11, Mouse strain C57BL/6J (56 days, male) 2.4
69838358 Antisense, RP_050301_02_E09, Mouse strain C57BL/6J (56 days, male) 1.6

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