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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
52.2
nTPM
HPA Brain:
161.0
nTPM
GTEx:
52.2
nTPM
FANTOM5:
159.2
Scaled Tags Per Million
Pig:
11.2
nTPM
Mouse:
10.3
nTPM
Allen mouse:
2.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
161.0
Sample id
Sample description
nTPM
Amygdala nTPM: 153.0
2695
Female, age 67, right hemisphere
221.3
2814
Male, age 76, right hemisphere
163.2
1987
Female, age 91, left hemisphere
146.6
2514
Male, age 75, right hemisphere
118.6
2517
Female, age 94, left hemisphere
115.1
Basal amygdala nTPM: 161.0
2243
Female, age 91, right hemisphere
204.3
2110
Male, age 80, left hemisphere
200.3
1955
Male, age 76, both hemispheres
153.9
2609
Male, age 75, right hemisphere
153.1
2685
Female, age 94, left hemisphere
138.1
2827
Female, age 67, right hemisphere
116.3
Central amygdala nTPM: 150.1
2515
Male, age 75, right hemisphere
186.8
1905
Male, age 76, both hemispheres
159.5
2239
Male, age 80, left hemisphere
155.7
2701
Female, age 91, right hemisphere
133.9
2826
Female, age 94, left hemisphere
114.8
Corticomedial amygdala nTPM: 156.3
2242
Female, age 91, right hemisphere
186.0
2829
Male, age 80, left hemisphere
176.9
2428
Male, age 75, right hemisphere
147.5
2429
Female, age 94, left hemisphere
146.3
2535
Female, age 67, right hemisphere
140.7
2240
Male, age 76, both hemispheres
140.4
Lateral amygdala nTPM: 137.1
2256
Male, age 80, left hemisphere
186.9
2255
Female, age 91, right hemisphere
135.8
1883
Male, age 76, both hemispheres
132.6
2516
Male, age 75, right hemisphere
128.1
2534
Female, age 94, left hemisphere
125.5
2830
Female, age 67, right hemisphere
113.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
52.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 52.2
Samples: 152
Max nTPM: 238.5
Min nTPM: 15.7
Std nTPM: 32.5
Median nTPM: 45.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
238.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
215.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
188.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
138.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
130.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
128.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
119.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
117.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
108.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
108.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
102.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
100.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
91.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
87.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
80.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
77.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
77.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
76.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
75.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
75.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
72.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
72.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
71.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
71.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
68.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
66.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
65.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
65.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
64.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
63.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
63.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
62.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
62.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
61.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
60.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
60.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
60.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
59.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
58.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
58.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
58.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
58.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
57.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
56.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
56.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
53.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
52.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
52.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
52.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
52.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
51.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
50.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
50.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
50.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
50.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
50.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
49.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
49.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
48.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
48.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
48.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
48.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
48.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
48.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
47.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
47.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
47.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
47.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
46.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
46.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
46.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
46.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
46.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
45.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
45.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
45.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
44.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
44.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
42.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
42.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
42.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
42.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
40.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
40.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
40.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
40.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
39.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
39.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
39.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
39.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
38.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
38.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
38.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
38.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
38.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
38.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
38.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
37.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
37.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
36.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
36.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
36.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
36.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
36.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
35.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
35.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
35.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
35.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
35.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
35.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
34.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
33.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
33.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
33.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
33.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
33.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
33.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
33.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
32.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
32.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
32.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
32.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
32.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
31.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
31.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
31.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
30.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
30.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
30.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
30.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
30.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
29.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
29.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
28.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
28.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
27.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
27.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
26.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
26.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
25.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
25.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
25.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
24.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
24.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
24.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
24.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
24.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
19.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
19.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
19.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
19.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
15.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
10.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 10.3
Samples: 4
Max nTPM: 12.7
Min nTPM: 9.0
Sample A
Male
9.5
Sample B
Male
9.0
Sample C
Female
12.7
Sample D
Female
10.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.