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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SF3B5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
119.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
336.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
213.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
199.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
197.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
178.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
171.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
160.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
148.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
146.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
145.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
141.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
141.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
141.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
138.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
136.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
135.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
133.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
130.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
129.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
127.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
127.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
124.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
122.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
120.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
120.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
120.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
118.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
117.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
116.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
116.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
115.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
114.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
112.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
109.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
109.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
109.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
108.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
106.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
106.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
103.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
102.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
102.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
100.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
98.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
98.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
97.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
93.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
93.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
92.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
92.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
91.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
91.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
90.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
86.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
85.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
84.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
83.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
82.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
81.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
77.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
73.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
72.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
68.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SF3B5 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
116.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
324.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
279.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
242.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
240.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
240.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
228.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
222.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
220.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
212.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
209.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
204.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
202.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
199.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
198.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
196.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
194.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
193.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
189.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
189.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
187.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
178.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
177.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
176.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
176.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
175.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
174.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
173.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
173.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
173.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
171.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
170.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
170.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
169.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
169.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
167.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
167.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
167.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
167.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
166.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
166.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
166.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
166.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
163.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
163.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
162.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
161.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
161.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
161.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
160.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
159.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
159.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
158.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
158.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
158.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
158.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
157.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
157.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
156.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
156.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
156.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
156.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
156.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
154.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
154.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
154.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
152.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
152.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
152.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
152.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
151.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
150.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
150.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
149.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
149.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
149.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
148.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
148.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
148.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
147.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
147.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
146.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
146.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
146.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
145.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
145.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
145.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
145.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
144.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
144.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
144.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
144.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
144.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
144.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
143.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
143.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
143.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
143.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
143.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
142.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
142.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
142.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
142.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
142.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
142.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
142.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
142.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
141.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
141.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
141.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
141.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
141.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
140.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
140.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
140.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
140.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
139.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
139.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
139.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
139.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
139.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
138.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
138.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
138.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
137.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
137.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
137.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
137.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
136.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
136.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
136.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
136.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
136.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
136.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
135.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
135.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
135.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
135.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
134.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
134.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
133.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
133.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
133.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
132.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
132.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
132.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
131.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
131.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
131.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
131.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
131.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
131.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
131.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
131.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
130.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
130.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
130.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
130.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
130.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
130.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
129.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
129.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
129.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
129.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
129.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
129.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
128.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
128.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
128.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
127.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
127.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
127.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
127.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
127.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
127.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
127.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
127.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
127.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
126.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
126.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
126.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
126.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
126.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
126.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
125.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
125.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
125.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
125.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
125.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
125.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
124.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
123.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
123.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
123.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
123.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
123.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
122.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
122.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
122.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
122.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
122.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
122.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
122.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
122.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
122.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
122.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
122.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
121.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
121.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
121.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
121.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
121.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
121.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
121.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
121.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
121.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
121.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
121.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
120.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
120.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
120.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
120.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
120.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
119.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
119.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
119.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
119.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
119.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
119.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
118.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
118.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
118.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
118.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
118.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
118.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
118.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
117.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
117.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
117.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
117.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
117.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
116.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
116.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
116.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
116.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
115.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
115.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
115.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
115.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
115.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
114.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
114.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
114.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
114.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
114.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
113.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
113.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
113.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
113.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
113.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
112.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
112.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
112.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
112.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
112.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
112.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
112.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
112.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
112.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
111.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
111.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
111.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
111.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
110.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
110.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
110.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
110.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
110.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
109.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
109.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
109.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
109.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
109.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
109.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
108.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
108.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
108.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
107.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
107.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
107.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
107.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
107.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
107.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
107.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
107.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
106.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
106.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
106.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
106.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
106.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
106.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
106.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
106.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
106.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
106.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
106.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
105.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
105.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
105.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
105.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
105.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
105.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
105.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
104.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
104.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
104.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
104.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
104.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
104.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
104.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
103.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
103.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
103.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
103.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
103.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
103.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
103.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
103.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
103.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
102.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
102.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
102.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
102.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
102.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
102.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
102.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
102.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
101.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
101.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
101.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
101.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
101.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
101.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
101.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
101.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
101.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
101.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
100.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
100.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
100.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
99.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
99.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
99.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
99.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
99.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
99.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
99.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
98.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
98.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
98.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
98.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
98.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
98.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
98.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
97.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
97.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
97.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
97.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
97.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
97.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
96.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
96.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
96.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
96.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
96.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
96.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
96.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
95.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
95.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
95.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
95.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
95.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
94.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
94.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
94.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
94.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
94.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
93.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
93.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
93.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
93.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
93.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
93.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
92.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
92.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
92.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
92.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
92.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
92.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
92.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
92.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
92.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
92.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
91.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
91.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
91.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
91.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
90.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
90.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
90.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
89.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
89.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
89.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
89.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
89.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
88.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
88.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
88.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
88.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
88.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
88.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
88.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
87.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
87.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
87.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
87.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
87.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
87.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
87.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
87.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
86.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
86.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
85.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
85.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
85.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
85.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
85.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
84.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
84.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
84.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
84.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
84.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
83.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
83.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
82.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
82.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
82.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
82.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
82.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
82.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
81.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
81.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
80.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
80.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
79.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
79.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
79.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
79.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
78.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
78.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
78.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
77.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
77.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
76.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
76.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
76.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
76.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
76.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
76.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
75.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
75.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
75.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
75.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
75.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
75.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
74.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
74.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
74.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
74.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
73.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
73.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
73.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
72.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
72.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
72.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
72.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
72.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
72.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
72.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
71.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
71.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
71.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
71.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
70.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
70.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
69.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
69.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
69.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
68.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
68.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
66.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
66.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
65.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
63.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
63.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
62.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
61.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
60.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
59.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
58.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
57.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
55.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
54.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
54.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
52.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
51.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
50.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
46.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
44.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
30.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
7.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SF3B5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
90.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
264.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
181.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
143.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
133.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
131.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
129.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
124.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
123.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
122.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
116.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
116.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
115.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
114.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
113.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
112.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
111.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
109.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
108.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
107.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
106.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
105.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
105.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
105.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
104.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
101.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
101.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
101.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
100.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
100.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
99.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
96.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
96.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
96.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
95.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
95.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
94.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
94.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
94.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
94.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
93.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
93.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
91.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
90.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
90.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
90.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
88.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
88.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
88.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
87.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
87.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
85.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
85.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
85.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
85.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
84.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
83.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
83.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
83.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
83.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
82.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
81.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
80.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
80.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
79.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
78.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
77.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
77.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
76.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
75.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
75.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
75.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
75.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
74.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
74.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
73.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
73.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
73.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
73.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
72.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
72.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
70.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
69.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
69.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
69.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
67.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
67.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
66.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
66.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
64.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
63.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
62.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
61.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
60.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
60.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
58.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
55.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
55.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
52.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
52.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SF3B5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
167.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
388.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
379.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
359.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
359.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
356.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
347.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
313.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
299.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
298.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
293.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
289.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
287.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
273.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
259.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
255.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
253.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
252.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
252.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
248.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
245.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
242.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
242.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
241.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
241.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
239.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
238.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
237.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
235.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
235.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
233.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
233.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
233.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
232.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
230.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
229.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
228.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
226.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
226.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
226.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
226.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
226.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
225.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
221.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
221.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
221.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
220.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
220.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
220.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
219.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
216.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
215.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
214.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
213.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
213.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
212.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
212.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
210.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
207.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
206.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
205.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
204.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
200.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
199.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
198.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
197.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
197.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
197.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
196.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
194.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
193.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
193.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
193.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
193.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
191.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
190.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
190.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
189.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
189.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
188.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
187.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
187.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
187.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
187.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
186.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
186.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
186.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
185.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
185.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
184.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
184.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
184.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
184.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
183.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
182.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
182.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
182.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
181.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
181.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
180.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
179.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
179.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
178.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
178.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
177.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
176.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
176.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
175.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
175.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
174.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
171.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
171.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
171.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
170.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
170.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
169.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
169.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
169.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
168.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
167.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
167.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
167.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
167.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
167.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
167.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
167.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
166.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
166.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
166.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
166.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
166.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
166.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
165.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
165.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
165.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
165.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
165.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
164.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
164.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
164.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
164.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
163.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
162.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
162.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
161.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
160.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
160.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
160.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
159.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
159.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
159.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
159.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
158.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
158.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
158.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
157.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
157.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
156.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
156.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
156.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
156.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
155.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
155.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
155.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
155.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
155.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
154.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
154.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
153.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
153.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
153.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
152.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
152.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
152.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
152.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
150.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
150.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
149.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
149.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
148.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
147.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
147.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
146.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
145.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
145.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
143.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
143.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
142.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
142.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
141.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
141.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
140.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
140.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
139.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
139.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
139.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
139.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
139.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
138.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
138.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
138.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
138.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
138.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
136.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
136.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
135.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
135.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
135.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
135.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
134.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
133.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
133.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
132.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
131.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
130.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
130.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
130.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
130.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
129.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
128.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
128.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
127.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
126.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
126.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
125.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
124.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
124.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
124.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
123.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
122.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
122.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
122.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
121.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
121.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
120.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
118.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
117.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
117.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
117.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
116.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
115.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
115.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
114.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
113.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
113.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
113.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
112.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
112.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
112.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
112.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
110.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
110.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
109.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
109.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
106.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
105.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
103.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
99.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
99.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
98.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
98.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
96.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
92.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
90.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
87.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
86.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
86.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
86.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
83.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
78.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
76.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
74.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
71.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
69.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
68.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
64.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
63.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
58.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
58.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
50.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
43.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
38.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
27.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0017410003
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0017850003
Tumor
0.5
CPT0012640003
Normal
0.5
CPT0077110003
Tumor
0.5
CPT0084590001
Normal
0.5
CPT0009060003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0079300001
Normal
0.4
CPT0012080003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0088550004
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0084560003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0079510001
Normal
0.3
CPT0069000003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0071150004
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0014370004
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0018250001
Normal
0.3
CPT0001270001
Normal
0.3
CPT0076330003
Tumor
0.3
CPT0078530001
Normal
0.3
CPT0075170001
Normal
0.3
CPT0076350001
Normal
0.3
CPT0001260009
Tumor
0.3
CPT0000780007
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0001540009
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0006730001
Normal
0.2
CPT0079410003
Tumor
0.2
CPT0007870001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0088900003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0026410003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0069010001
Normal
0.2
CPT0000870016
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0079380003
Tumor
0.2
CPT0007470001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0000660001
Normal
0.2
CPT0025580004
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0001510001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0012770003
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0012920003
Normal
0.1
CPT0012570003
Normal
0.1
CPT0065820001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0075570001
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0078940001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0014130001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0007320003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0063330001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0002370001
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0078660003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0065750003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0019990003
Tumor
-0.3
CPT0086360003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0066480003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0025290003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0092290003
Tumor
-0.4
CPT0001500009
Tumor
-0.5
CPT0020120003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
