We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM4SF1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
178.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
82.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
71.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
68.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
67.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
51.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
47.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
43.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
41.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
40.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
32.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
32.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
30.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
30.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
29.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
27.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
26.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
24.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
24.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
24.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
23.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
23.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
23.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
23.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
23.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
22.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
22.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
20.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
20.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
19.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
19.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
19.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
16.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
16.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
15.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
14.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
14.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
14.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
14.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
13.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
13.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
13.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
12.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
12.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
11.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
10.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
10.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
9.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
8.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
7.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
7.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
7.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
7.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
6.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
6.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
5.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
4.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM4SF1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
119.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
1435.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
1292.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
740.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
429.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
405.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
384.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
350.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
349.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
340.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
339.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
328.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
325.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
324.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
320.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
315.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
302.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
295.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
294.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
287.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
275.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
272.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
259.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
253.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
251.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
250.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
247.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
244.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
242.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
239.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
238.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
238.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
233.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
231.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
230.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
229.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
225.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
222.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
222.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
220.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
220.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
219.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
218.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
216.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
215.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
215.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
214.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
212.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
211.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
210.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
209.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
208.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
206.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
206.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
204.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
202.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
201.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
198.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
198.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
197.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
196.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
195.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
195.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
195.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
192.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
192.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
192.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
192.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
190.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
189.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
187.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
187.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
186.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
185.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
185.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
183.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
182.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
182.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
179.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
178.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
178.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
177.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
176.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
175.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
175.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
174.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
174.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
174.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
174.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
173.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
173.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
173.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
173.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
172.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
171.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
169.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
167.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
167.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
167.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
166.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
165.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
164.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
162.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
161.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
161.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
161.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
160.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
159.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
159.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
159.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
159.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
158.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
158.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
158.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
158.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
157.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
156.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
155.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
154.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
154.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
153.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
153.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
152.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
152.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
152.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
152.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
151.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
150.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
150.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
150.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
150.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
149.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
148.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
148.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
148.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
148.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
148.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
147.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
147.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
146.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
146.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
145.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
141.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
141.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
140.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
140.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
139.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
138.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
138.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
138.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
138.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
137.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
137.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
136.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
136.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
135.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
135.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
135.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
135.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
135.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
135.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
134.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
134.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
133.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
133.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
132.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
132.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
131.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
131.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
131.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
131.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
130.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
130.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
129.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
129.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
129.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
128.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
128.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
127.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
127.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
127.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
126.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
126.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
126.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
125.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
125.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
125.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
125.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
124.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
124.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
124.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
122.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
122.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
122.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
122.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
122.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
122.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
121.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
120.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
119.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
119.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
119.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
118.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
117.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
117.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
117.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
117.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
117.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
116.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
116.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
116.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
116.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
114.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
114.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
114.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
114.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
113.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
113.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
113.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
113.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
113.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
113.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
112.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
112.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
111.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
111.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
111.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
110.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
109.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
108.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
108.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
107.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
107.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
107.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
106.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
106.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
106.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
106.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
106.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
105.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
105.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
105.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
105.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
105.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
104.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
104.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
103.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
103.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
103.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
103.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
103.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
103.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
102.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
102.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
102.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
101.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
101.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
101.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
101.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
101.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
99.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
99.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
99.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
98.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
98.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
98.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
97.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
97.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
97.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
97.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
96.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
96.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
95.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
94.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
94.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
94.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
94.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
94.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
94.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
93.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
93.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
92.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
92.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
92.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
92.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
92.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
91.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
91.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
91.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
91.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
91.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
91.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
90.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
90.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
90.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
90.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
90.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
89.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
89.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
89.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
89.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
89.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
89.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
88.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
88.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
88.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
87.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
87.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
86.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
86.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
86.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
85.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
85.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
85.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
84.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
84.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
83.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
83.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
83.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
83.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
83.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
83.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
83.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
83.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
82.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
82.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
82.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
82.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
82.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
82.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
81.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
81.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
81.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
81.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
80.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
80.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
79.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
79.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
78.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
78.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
77.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
77.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
77.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
76.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
76.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
76.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
75.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
75.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
75.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
75.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
75.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
75.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
74.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
74.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
74.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
74.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
74.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
74.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
74.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
73.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
73.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
73.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
73.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
73.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
73.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
73.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
72.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
72.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
72.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
71.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
69.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
69.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
69.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
69.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
69.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
69.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
69.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
69.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
68.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
68.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
67.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
67.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
67.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
67.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
66.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
66.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
66.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
66.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
65.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
65.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
65.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
64.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
64.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
64.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
64.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
64.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
63.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
63.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
63.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
63.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
63.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
63.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
62.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
62.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
61.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
61.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
61.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
60.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
60.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
60.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
60.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
60.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
59.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
59.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
59.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
59.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
58.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
58.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
58.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
58.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
55.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
55.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
55.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
54.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
54.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
54.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
54.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
54.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
54.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
53.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
53.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
52.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
52.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
52.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
52.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
51.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
51.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
51.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
51.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
51.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
51.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
51.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
50.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
50.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
50.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
50.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
50.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
50.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
50.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
49.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
49.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
49.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
47.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
47.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
47.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
47.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
47.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
46.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
46.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
46.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
46.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
46.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
45.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
45.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
44.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
43.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
42.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
42.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
41.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
40.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
40.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
39.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
39.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
39.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
39.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
38.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
38.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
38.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
37.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
37.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
37.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
37.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
35.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
34.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
33.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
33.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
32.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
32.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
32.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
32.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
31.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
30.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
29.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
28.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
28.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
27.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
26.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
26.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
25.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
25.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
24.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
23.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
23.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
22.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
20.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
19.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
19.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
19.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
17.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
14.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
12.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
10.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM4SF1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
129.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
487.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
446.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
344.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
338.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
334.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
326.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
307.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
258.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
249.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
224.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
222.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
219.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
205.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
186.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
185.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
181.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
178.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
174.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
173.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
168.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
166.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
160.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
160.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
157.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
154.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
152.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
151.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
146.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
145.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
144.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
143.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
142.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
140.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
139.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
131.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
128.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
127.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
125.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
123.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
123.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
123.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
121.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
119.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
119.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
116.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
116.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
115.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
115.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
114.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
114.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
113.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
112.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
109.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
107.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
106.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
105.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
102.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
101.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
100.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
100.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
96.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
96.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
95.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
93.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
92.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
90.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
90.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
88.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
87.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
86.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
86.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
86.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
85.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
83.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
82.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
76.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
75.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
72.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
69.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
68.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
67.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
64.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
64.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
63.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
60.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
60.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
57.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
56.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
55.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
54.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
54.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
53.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
42.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
41.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
38.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
33.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
26.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
22.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM4SF1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
84.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
736.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
388.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
377.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
365.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
354.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
353.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
346.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
346.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
339.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
315.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
302.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
300.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
287.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
286.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
272.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
271.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
266.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
258.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
245.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
243.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
240.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
235.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
232.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
222.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
222.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
216.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
215.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
207.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
207.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
204.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
204.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
204.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
203.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
199.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
192.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
187.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
175.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
174.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
174.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
170.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
169.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
164.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
163.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
161.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
160.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
159.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
153.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
152.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
147.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
146.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
142.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
142.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
142.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
140.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
134.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
134.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
134.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
134.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
133.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
128.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
127.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
126.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
126.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
126.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
123.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
122.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
120.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
114.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
113.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
110.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
108.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
107.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
106.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
105.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
103.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
102.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
99.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
99.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
98.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
98.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
97.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
96.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
94.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
93.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
92.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
92.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
91.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
91.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
91.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
89.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
88.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
88.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
87.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
87.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
86.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
86.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
83.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
83.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
82.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
81.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
78.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
76.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
75.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
75.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
74.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
73.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
72.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
72.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
69.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
69.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
67.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
67.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
66.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
65.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
65.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
63.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
62.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
62.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
61.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
61.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
61.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
60.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
58.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
58.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
57.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
57.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
57.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
57.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
56.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
55.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
55.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
53.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
53.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
52.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
51.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
51.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
51.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
50.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
50.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
50.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
50.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
50.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
50.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
49.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
49.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
48.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
48.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
48.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
47.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
47.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
45.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
45.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
44.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
43.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
43.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
42.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
42.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
41.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
41.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
41.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
40.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
39.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
38.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
37.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
37.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
37.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
36.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
36.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
36.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
35.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
35.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
35.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
35.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
35.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
34.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
34.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
34.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
33.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
33.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
33.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
33.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
33.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
33.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
32.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
32.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
31.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
31.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
31.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
31.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
30.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
30.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
30.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
29.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
28.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
28.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
28.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
28.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
28.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
27.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
27.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
27.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
27.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
27.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
27.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
26.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
26.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
26.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
26.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
26.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
25.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
25.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
25.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
24.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
24.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
23.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
23.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
23.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
22.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
21.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
21.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
21.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
21.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
21.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
20.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
20.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
19.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
19.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
19.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
18.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
18.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
18.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
18.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
17.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
17.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
17.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
17.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
16.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
15.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
14.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
14.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
14.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
13.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
13.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
12.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
12.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
11.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
9.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
9.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
8.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
8.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
7.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
6.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
6.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
4.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
4.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
3.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
3.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
