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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYAP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
46.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
43.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
42.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
41.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
41.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
40.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
40.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
40.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
39.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
38.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
38.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
35.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
34.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
33.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
32.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
31.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
30.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
29.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
29.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
28.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
27.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
24.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
24.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
24.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
24.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
23.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
22.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
21.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
21.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
21.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
21.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
21.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
20.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
20.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
20.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
19.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
19.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
17.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
17.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
16.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
16.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
15.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
15.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
13.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
13.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
13.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
12.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
9.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYAP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
85.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
53.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
43.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
40.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
39.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
33.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
31.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
31.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
30.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
28.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
27.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
26.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
26.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
26.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
26.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
25.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
25.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
25.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
25.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
24.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
23.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
23.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
22.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
22.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
22.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
22.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
22.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
22.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
22.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
22.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
22.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
21.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
21.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
21.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
21.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
21.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
21.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
21.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
20.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
20.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
20.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
20.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
20.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
20.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
20.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
20.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
20.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
20.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
20.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
20.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
19.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
19.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
19.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
19.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
19.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
19.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
19.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
19.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
19.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
18.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
18.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
18.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
18.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
18.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
18.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
18.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
18.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
18.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
18.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
18.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
18.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
18.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
17.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
17.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
17.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
17.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
17.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
17.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
17.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
17.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
17.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
17.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
17.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
17.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
17.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
17.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
17.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
17.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
17.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
17.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
17.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
17.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
17.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
17.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
17.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
17.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
16.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
16.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
16.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
16.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
16.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
16.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
16.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
16.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
16.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
16.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
16.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
16.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
16.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
16.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
16.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
16.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
16.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
16.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
16.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
16.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
16.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
16.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
16.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
16.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
16.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
16.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
16.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
16.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
16.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
15.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
15.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
15.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
15.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
15.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
15.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
15.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
15.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
15.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
15.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
15.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
15.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
15.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
15.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
15.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
15.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
15.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
15.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
15.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
15.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
15.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
15.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
15.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
15.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
15.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
15.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
15.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
14.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
14.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
14.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
14.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
14.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
14.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
14.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
14.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
14.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
14.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
14.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
14.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
14.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
14.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
14.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
14.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
14.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
14.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
14.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
14.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
13.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
13.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
13.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
13.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
13.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
13.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
13.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
13.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
13.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
13.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
13.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
13.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
13.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
13.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
13.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
13.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
13.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
13.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
13.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
12.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
12.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
12.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
12.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
12.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
12.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
12.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
12.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
12.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
12.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
12.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
12.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
12.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
11.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
11.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
11.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
11.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
11.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
11.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
11.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
11.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
11.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
11.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
11.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
11.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
11.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
11.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
11.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
10.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
9.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
9.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
9.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
9.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
9.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
8.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
8.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
8.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
7.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
6.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYAP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
24.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
23.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
23.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
22.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
22.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
22.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
22.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
21.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
21.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
20.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
20.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
20.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
19.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
19.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
19.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
19.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
18.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
18.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
18.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
17.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
17.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
16.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
16.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
16.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
15.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
15.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
15.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
15.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
14.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
14.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
14.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
14.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
14.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
14.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
14.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
13.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
13.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
13.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
12.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
12.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
12.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
12.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
11.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
11.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
11.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
10.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
10.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
10.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
9.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
8.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYAP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
90.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
66.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
44.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
42.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
38.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
37.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
37.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
37.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
36.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
35.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
35.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
34.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
33.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
33.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
33.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
32.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
31.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
29.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
29.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
28.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
28.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
27.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
27.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
27.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
26.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
26.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
25.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
25.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
25.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
25.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
24.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
24.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
24.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
24.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
24.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
23.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
23.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
23.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
23.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
22.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
22.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
22.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
22.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
22.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
22.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
21.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
21.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
21.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
21.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
21.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
21.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
21.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
20.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
20.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
20.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
20.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
20.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
19.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
19.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
19.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
19.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
19.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
19.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
19.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
19.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
19.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
19.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
19.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
18.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
18.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
18.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
18.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
18.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
18.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
18.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
18.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
17.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
17.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
17.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
17.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
17.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
17.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
17.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
17.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
17.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
17.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
17.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
16.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
16.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
16.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
16.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
16.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
16.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
16.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
16.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
15.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
15.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
15.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
15.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
15.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
15.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
15.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
15.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
15.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
15.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
15.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
15.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
15.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
15.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
14.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
14.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
14.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
14.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
14.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
14.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
14.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
13.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
13.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
13.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
13.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
13.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
13.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
13.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
13.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
12.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
12.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
12.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
12.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
12.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
12.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
12.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
11.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
11.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
11.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
11.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
11.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
11.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
11.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
11.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
10.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
10.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
10.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
10.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
10.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
9.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
9.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
9.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
9.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
8.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
8.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
8.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
8.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
8.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
8.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
7.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
6.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012550003
Tumor
1.7
CPT0023350003
Tumor
1.2
CPT0079180003
Tumor
1.1
CPT0012280003
Tumor
0.9
CPT0081880003
Tumor
0.9
CPT0002350011
Tumor
0.9
CPT0086950003
Tumor
0.7
CPT0078660003
Tumor
0.7
CPT0025110003
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0079270003
Tumor
0.6
CPT0063630003
Tumor
0.5
CPT0001180009
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0007870001
Normal
0.4
CPT0012570003
Normal
0.3
CPT0069000003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0006730001
Normal
0.3
CPT0086820003
Tumor
0.3
CPT0001350001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0088690003
Tumor
0.3
CPT0063330001
Normal
0.3
CPT0065430003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0079000001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0066430001
Normal
0.2
CPT0066520001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0079300001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0001500009
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0078670001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0086890003
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0077140001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0023710001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0079510001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0081620001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0088920001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0001190001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0092290003
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0077110003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0065870003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0025920001
Normal
-0.2
CPT0079230003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0088550004
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0006900003
Tumor
-0.3
CPT0087040003
Tumor
-0.3
CPT0026410003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0089460004
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0012670003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0089020003
Tumor
-0.3
CPT0092730003
Tumor
-0.4
CPT0075720003
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0025230003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0088630003
Tumor
-0.5
CPT0017850003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
