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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPNS1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
220.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
57.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
39.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
38.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
37.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
37.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
36.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
33.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
32.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
32.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
31.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
31.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
31.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
31.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
31.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
31.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
30.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
30.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
30.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
29.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
29.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
27.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
27.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
26.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
25.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
25.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
24.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
23.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
23.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
23.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
23.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
23.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
22.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
22.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
22.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
21.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
21.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
21.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
20.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
20.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
20.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
19.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
19.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
19.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
19.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
19.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
18.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
18.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
18.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
17.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
17.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
17.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
16.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
16.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
16.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
13.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
12.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
12.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
10.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
10.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
10.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPNS1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
114.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
110.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
100.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
76.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
73.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
63.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
61.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
60.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
57.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
57.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
54.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
53.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
53.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
52.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
51.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
51.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
50.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
49.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
48.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
48.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
48.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
48.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
47.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
47.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
46.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
46.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
46.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
46.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
46.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
46.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
46.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
46.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
45.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
44.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
43.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
43.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
43.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
43.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
43.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
42.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
42.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
42.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
42.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
42.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
41.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
41.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
41.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
41.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
41.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
41.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
40.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
40.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
40.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
39.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
39.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
39.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
39.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
39.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
39.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
39.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
39.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
39.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
38.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
38.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
38.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
38.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
38.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
38.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
37.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
37.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
37.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
37.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
37.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
37.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
37.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
37.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
37.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
36.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
36.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
36.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
36.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
36.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
36.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
36.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
36.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
35.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
35.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
35.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
35.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
35.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
35.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
35.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
35.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
34.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
34.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
34.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
34.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
34.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
34.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
34.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
34.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
34.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
34.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
34.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
34.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
34.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
34.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
34.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
34.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
34.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
33.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
33.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
33.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
33.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
33.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
33.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
33.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
33.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
33.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
33.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
33.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
33.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
33.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
33.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
32.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
32.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
32.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
32.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
32.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
32.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
32.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
32.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
32.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
32.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
32.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
32.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
32.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
32.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
32.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
32.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
32.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
32.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
31.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
31.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
31.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
31.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
31.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
31.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
31.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
31.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
31.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
31.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
31.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
31.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
31.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
31.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
31.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
31.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
31.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
31.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
31.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
31.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
31.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
31.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
31.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
31.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
31.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
31.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
30.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
30.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
30.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
30.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
30.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
30.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
30.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
30.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
30.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
30.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
30.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
30.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
30.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
30.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
30.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
30.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
30.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
30.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
30.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
30.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
30.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
30.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
30.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
30.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
29.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
29.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
29.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
29.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
29.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
29.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
29.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
29.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
29.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
29.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
29.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
29.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
29.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
29.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
29.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
29.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
29.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
29.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
29.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
29.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
29.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
29.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
29.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
29.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
29.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
29.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
28.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
28.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
28.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
28.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
28.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
28.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
28.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
28.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
28.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
28.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
28.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
28.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
28.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
28.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
28.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
28.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
28.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
28.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
28.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
28.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
28.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
28.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
28.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
28.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
28.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
28.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
28.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
28.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
28.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
28.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
28.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
28.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
28.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
28.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
28.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
28.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
28.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
28.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
27.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
27.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
27.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
27.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
27.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
27.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
27.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
27.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
27.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
27.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
27.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
27.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
27.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
27.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
27.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
27.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
27.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
27.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
27.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
27.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
27.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
27.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
27.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
27.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
27.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
27.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
27.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
27.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
27.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
27.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
27.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
27.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
27.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
27.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
26.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
26.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
26.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
26.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
26.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
26.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
26.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
26.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
26.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
26.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
26.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
26.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
26.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
26.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
26.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
26.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
26.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
26.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
26.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
26.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
26.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
26.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
25.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
25.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
25.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
25.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
25.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
25.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
25.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
25.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
25.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
25.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
25.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
25.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
25.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
25.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
25.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
25.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
25.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
25.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
25.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
25.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
25.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
25.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
25.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
25.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
25.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
25.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
25.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
25.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
25.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
25.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
24.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
24.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
24.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
24.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
24.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
24.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
24.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
24.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
24.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
24.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
24.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
24.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
24.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
24.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
24.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
24.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
24.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
24.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
24.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
24.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
24.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
24.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
24.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
24.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
24.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
23.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
23.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
23.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
23.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
23.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
23.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
23.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
23.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
23.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
23.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
23.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
23.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
23.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
23.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
23.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
23.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
23.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
23.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
23.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
23.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
23.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
23.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
23.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
22.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
22.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
22.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
22.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
22.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
22.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
22.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
22.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
22.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
22.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
22.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
22.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
22.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
22.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
22.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
22.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
21.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
21.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
21.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
21.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
21.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
21.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
21.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
21.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
21.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
21.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
21.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
21.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
21.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
21.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
21.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
21.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
21.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
21.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
21.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
21.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
21.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
21.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
20.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
20.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
20.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
20.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
20.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
20.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
20.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
20.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
20.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
19.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
19.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
19.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
19.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
19.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
19.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
19.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
19.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
19.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
18.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
18.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
18.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
18.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
18.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
18.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
18.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
17.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
17.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
17.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
17.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
17.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
17.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
17.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
17.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
17.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
16.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
16.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
16.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
14.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
14.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
14.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
13.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
13.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
13.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
13.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
8.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
6.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
6.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPNS1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
57.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
56.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
56.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
53.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
51.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
51.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
46.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
46.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
46.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
45.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
45.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
44.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
43.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
43.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
42.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
42.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
41.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
41.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
40.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
39.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
39.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
38.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
38.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
38.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
38.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
37.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
37.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
37.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
37.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
37.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
36.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
36.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
36.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
36.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
35.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
35.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
35.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
35.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
35.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
34.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
34.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
34.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
34.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
33.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
33.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
32.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
31.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
31.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
30.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
30.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
30.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
29.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
29.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
29.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
29.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
29.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
28.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
28.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
28.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
28.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
27.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
27.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
27.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
27.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
26.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
26.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
26.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
26.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
26.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
25.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
25.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
25.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
24.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
24.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
24.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
24.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
23.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
23.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
22.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
21.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
21.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
21.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
20.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
19.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
18.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
16.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
13.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPNS1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
61.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
174.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
156.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
152.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
149.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
143.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
141.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
136.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
129.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
129.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
126.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
126.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
125.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
123.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
121.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
121.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
119.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
118.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
113.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
110.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
107.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
107.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
106.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
105.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
103.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
103.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
103.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
102.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
101.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
101.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
98.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
96.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
95.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
95.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
93.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
93.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
93.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
92.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
92.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
90.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
90.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
89.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
89.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
89.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
89.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
89.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
88.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
88.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
88.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
88.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
86.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
86.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
85.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
83.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
83.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
82.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
81.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
81.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
80.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
80.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
80.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
79.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
79.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
78.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
77.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
77.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
77.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
77.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
76.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
76.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
76.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
74.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
73.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
72.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
72.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
71.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
71.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
70.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
69.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
69.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
69.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
69.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
68.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
68.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
68.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
68.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
67.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
66.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
66.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
66.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
66.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
66.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
66.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
66.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
65.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
65.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
65.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
65.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
64.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
63.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
63.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
63.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
62.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
62.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
62.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
62.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
62.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
62.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
62.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
61.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
60.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
60.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
60.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
60.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
59.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
59.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
59.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
59.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
58.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
58.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
58.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
58.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
58.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
58.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
57.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
57.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
57.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
57.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
57.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
56.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
56.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
56.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
56.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
56.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
55.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
55.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
55.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
54.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
54.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
54.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
54.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
54.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
53.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
53.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
53.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
53.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
52.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
52.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
52.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
52.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
51.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
51.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
51.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
51.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
51.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
51.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
51.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
51.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
51.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
51.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
51.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
50.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
50.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
50.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
50.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
50.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
50.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
50.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
50.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
50.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
49.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
49.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
49.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
49.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
49.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
49.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
48.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
48.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
48.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
48.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
48.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
48.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
48.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
48.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
47.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
47.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
47.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
46.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
46.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
46.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
45.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
45.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
45.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
45.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
45.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
45.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
45.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
44.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
44.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
44.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
44.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
44.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
44.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
44.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
44.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
43.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
43.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
43.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
43.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
43.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
42.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
42.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
42.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
42.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
41.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
41.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
41.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
41.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
41.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
40.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
40.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
39.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
39.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
39.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
39.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
39.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
39.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
38.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
38.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
38.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
38.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
38.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
38.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
38.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
38.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
38.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
38.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
38.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
38.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
37.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
37.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
37.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
37.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
36.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
36.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
35.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
35.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
35.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
35.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
34.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
34.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
34.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
33.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
33.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
33.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
32.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
32.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
32.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
31.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
31.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
31.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
29.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
29.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
29.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
28.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
28.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
28.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
28.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
27.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
27.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
26.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
26.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
26.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
26.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
25.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
24.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
23.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
20.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
18.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
15.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
14.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0014160003
Tumor
1.0
CPT0075560003
Tumor
1.0
CPT0009000003
Tumor
0.9
CPT0023690003
Tumor
0.9
CPT0089460004
Tumor
0.8
CPT0001180009
Tumor
0.7
CPT0019990003
Tumor
0.7
CPT0011410003
Tumor
0.7
CPT0086950003
Tumor
0.7
CPT0077110003
Tumor
0.6
CPT0063630003
Tumor
0.6
CPT0007320003
Tumor
0.6
CPT0064370003
Tumor
0.6
CPT0086030003
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0025880003
Tumor
0.6
CPT0078930003
Tumor
0.6
CPT0078800003
Tumor
0.5
CPT0001500009
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0079180003
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0065690003
Tumor
0.5
CPT0078660003
Tumor
0.5
CPT0092160003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0079230003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0066470004
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0077310003
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0025170003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0026420001
Normal
0.3
CPT0069160003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0009020003
Normal
0.3
CPT0025290003
Tumor
0.3
CPT0012570003
Normal
0.3
CPT0081880003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0020020001
Normal
0.3
CPT0088760003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0013790003
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0026410003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0012090003
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0088780001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0000660001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0010170001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0025060001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0082010001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0076330003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0025610001
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0078990003
Tumor
-0.2
CPT0001510001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0001260009
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0001550001
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0086870003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0079300001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0065820001
Normal
-0.3
CPT0007860003
Tumor
-0.3
CPT0012640003
Normal
-0.4
CPT0011240003
Tumor
-0.4
CPT0069190001
Normal
-0.4
CPT0084560003
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0088900003
Tumor
-0.4
CPT0014470001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0079510001
Normal
-0.5
CPT0088920001
Normal
-0.5
CPT0017410003
Tumor
-0.5
CPT0081990003
Tumor
-0.6
CPT0015910003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
