HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:21.4 nTPM
HPA Brain:30.0 nTPM
GTEx:21.4 nTPM
FANTOM5:34.6 Scaled Tags Per Million
Pig:36.5 nTPM
Mouse:42.9 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043146
Glial cells High
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 30.0
Sample id Sample description nTPM
Hippocampus
nTPM: 28.4
2621 Female, age 67, right hemisphere 29.8
1855 Male, age 76, left hemisphere 29.1
1911 Female, age 85, right hemisphere 29.1
1898 Male, age 80, left hemisphere 29.0
2529 Female, age 94, left hemisphere 27.9
2148 Female, age 91, left hemisphere 25.5
Dentate gyrus
nTPM: 27.3
2530 Female, age 94, left hemisphere 31.3
1927 Female, age 91, both hemispheres 28.3
2531 Female, age 67, both hemispheres 26.7
2246 Female, age 85, both hemispheres 26.4
2010 Male, age 76, both hemispheres 26.3
2528 Male, age 74, both hemispheres 25.0
Entorhinal gyrus
nTPM: 29.5
2117 Female, age 91, right hemisphere 31.9
1787 Male, age 76, left hemisphere 30.0
2764 Male, age 80, right hemisphere 29.2
2613 Female, age 94, left hemisphere 28.9
1938 Female, age 85, left hemisphere 28.7
2686 Male, age 75, right hemisphere 27.9
Hippocampus, CA1
nTPM: 25.7
1873 Female, age 85, both hemispheres 28.7
2749 Male, age 80, left hemisphere 27.2
2527 Male, age 74, both hemispheres 27.1
2082 Female, age 91, right hemisphere 23.3
2045 Male, age 76, both hemispheres 22.0
Hippocampus, CA2
nTPM: 28.1
1892 Male, age 76, both hemispheres 30.3
1963 Male, age 80, left hemisphere 30.2
2437 Female, age 94, left hemisphere 28.5
1940 Female, age 85, left hemisphere 27.9
2249 Male, age 74, both hemispheres 27.2
2113 Female, age 91, right hemisphere 24.3
Hippocampus, CA3
nTPM: 26.4
2861 Female, age 67, both hemispheres 28.5
1891 Female, age 85, both hemispheres 28.3
1867 Male, age 76, both hemispheres 27.6
2620 Female, age 94, left hemisphere 26.5
2137 Male, age 80, left hemisphere 23.9
2436 Male, age 74, both hemispheres 23.5
Parahippocampal cortex
nTPM: 26.5
1933 Female, age 85, both hemispheres 28.7
1850 Male, age 80, both hemispheres 28.3
2245 Female, age 91, both hemispheres 28.1
2622 Female, age 67, right hemisphere 28.0
2692 Male, age 74, both hemispheres 27.7
2250 Female, age 67, right hemisphere 26.3
1990 Female, age 91, right hemisphere 25.5
2018 Male, age 76, both hemispheres 25.1
2532 Female, age 72, left hemisphere 25.1
2693 Female, age 94, both hemispheres 22.4
Perirhinal gyrus
nTPM: 26.2
1794 Male, age 80, right hemisphere 27.9
1847 Female, age 91, left hemisphere 26.3
1841 Female, age 85, right hemisphere 26.1
2521 Female, age 94, right hemisphere 25.7
2848 Male, age 76, right hemisphere 25.1
Subiculum
nTPM: 30.0
2438 Female, age 94, left hemisphere 36.6
2619 Male, age 74, both hemispheres 32.5
1901 Male, age 80, both hemispheres 31.2
2042 Male, age 76, both hemispheres 29.7
1977 Female, age 85, both hemispheres 27.8
2729 Female, age 91, right hemisphere 22.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 21.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.4
Samples: 197

Max nTPM: 37.2
Min nTPM: 10.0
Std nTPM: 5.0
Median nTPM: 21.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 37.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 34.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 34.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 32.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 32.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 31.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 30.7
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 30.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 30.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 30.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 29.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 34.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.6
FF:10153-102I9 76 years, female 44.3
FF:10169-103B7 60 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 36.5
Pig sample Sample description nTPM
Subiculum
nTPM: 35.5
Samples: 4

Max nTPM: 43.1
Min nTPM: 29.8
Sample A Female 43.1
Sample B Female 32.2
Sample C Male 36.7
Sample D Male 29.8
Dorsal hippocampus
nTPM: 34.7
Samples: 4

Max nTPM: 41.8
Min nTPM: 27.7
Sample A Female 41.8
Sample B Female 32.6
Sample C Male 36.6
Sample D Male 27.7
Entorhinal cortex
nTPM: 34.3
Samples: 4

Max nTPM: 39.9
Min nTPM: 30.2
Sample A Female 39.9
Sample B Female 30.2
Sample C Male 35.9
Sample D Male 31.2
Ventral hippocampus
nTPM: 36.5
Samples: 4

Max nTPM: 46.3
Min nTPM: 27.6
Sample A Female 35.4
Sample B Female 27.6
Sample C Male 46.3
Sample D Male 36.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 42.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.9
Samples: 4

Max nTPM: 43.0
Min nTPM: 39.6
Sample A Male 39.6
Sample B Male 41.0
Sample C Female 39.9
Sample D Female 43.0
Hippocampal formation
nTPM: 42.9
Samples: 4

Max nTPM: 43.5
Min nTPM: 42.3
Sample A Male 42.8
Sample B Male 42.3
Sample C Female 43.0
Sample D Female 43.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
67815968 Antisense, RP_040920_02_D11, Mouse strain C57BL/6J (56 days, male) 13.2
76135829 Antisense, RP_060518_01_A10, Mouse strain C57BL/6J (56 days, male) 1.0
68861994 Antisense, RP_050301_01_C08, Mouse strain C57BL/6J (56 days, male) 0.4

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