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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
202.2
nTPM
HPA Brain:
87.2
nTPM
GTEx:
202.2
nTPM
FANTOM5:
220.6
Scaled Tags Per Million
Pig:
151.1
nTPM
Mouse:
411.9
nTPM
Allen mouse:
10.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
87.2
Sample id
Sample description
nTPM
Amygdala nTPM: 87.2
2814
Male, age 76, right hemisphere
98.8
2514
Male, age 75, right hemisphere
92.3
2517
Female, age 94, left hemisphere
85.3
1987
Female, age 91, left hemisphere
83.1
2695
Female, age 67, right hemisphere
76.6
Basal amygdala nTPM: 73.2
2685
Female, age 94, left hemisphere
84.2
2110
Male, age 80, left hemisphere
80.1
2609
Male, age 75, right hemisphere
79.9
2827
Female, age 67, right hemisphere
70.4
2243
Female, age 91, right hemisphere
62.6
1955
Male, age 76, both hemispheres
62.2
Central amygdala nTPM: 80.1
2826
Female, age 94, left hemisphere
113.6
1905
Male, age 76, both hemispheres
87.7
2515
Male, age 75, right hemisphere
87.6
2239
Male, age 80, left hemisphere
57.9
2701
Female, age 91, right hemisphere
53.9
Corticomedial amygdala nTPM: 71.9
2428
Male, age 75, right hemisphere
95.3
2829
Male, age 80, left hemisphere
87.7
2429
Female, age 94, left hemisphere
76.1
2242
Female, age 91, right hemisphere
62.6
2240
Male, age 76, both hemispheres
57.6
2535
Female, age 67, right hemisphere
52.4
Lateral amygdala nTPM: 77.1
2534
Female, age 94, left hemisphere
97.6
2516
Male, age 75, right hemisphere
97.2
1883
Male, age 76, both hemispheres
88.5
2830
Female, age 67, right hemisphere
73.9
2256
Male, age 80, left hemisphere
54.3
2255
Female, age 91, right hemisphere
51.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
202.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 202.2
Samples: 152
Max nTPM: 848.6
Min nTPM: 98.6
Std nTPM: 90.7
Median nTPM: 179.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
848.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
516.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
502.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
454.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
432.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
421.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
374.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
347.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
344.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
310.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
309.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
301.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
291.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
287.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
287.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
285.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
281.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
278.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
272.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
266.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
264.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
263.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
259.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
257.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
256.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
256.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
253.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
247.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
247.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
246.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
245.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
245.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
245.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
244.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
243.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
237.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
233.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
233.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
231.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
229.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
228.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
228.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
226.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
225.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
225.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
222.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
219.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
219.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
217.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
215.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
212.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
211.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
210.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
210.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
200.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
199.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
198.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
197.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
196.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
195.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
194.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
194.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
192.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
191.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
190.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
190.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
190.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
189.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
189.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
187.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
186.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
185.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
185.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
184.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
180.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
179.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
179.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
178.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
178.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
176.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
174.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
174.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
174.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
173.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
173.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
172.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
172.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
171.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
171.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
171.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
169.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
168.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
168.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
168.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
167.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
166.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
164.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
163.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
163.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
162.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
161.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
161.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
160.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
160.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
157.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
155.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
154.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
153.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
152.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
151.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
150.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
150.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
148.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
146.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
145.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
145.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
144.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
144.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
143.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
143.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
142.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
139.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
139.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
136.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
135.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
134.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
134.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
134.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
133.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
132.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
129.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
127.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
127.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
126.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
126.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
125.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
125.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
124.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
123.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
122.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
122.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
121.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
120.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
118.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
115.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
114.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
114.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
111.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
106.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
106.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
105.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
98.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
411.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 411.9
Samples: 4
Max nTPM: 427.2
Min nTPM: 401.3
Sample A
Male
401.3
Sample B
Male
417.7
Sample C
Female
427.2
Sample D
Female
401.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.