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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDC2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
207.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
633.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
574.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
573.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
535.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
514.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
482.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
428.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
410.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
407.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
400.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
364.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
346.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
345.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
341.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
337.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
332.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
325.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
314.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
309.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
301.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
268.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
260.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
259.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
232.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
230.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
228.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
226.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
222.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
202.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
198.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
183.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
170.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
146.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
145.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
134.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
130.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
118.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
105.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
103.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
98.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
95.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
94.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
93.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
92.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
86.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
84.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
82.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
72.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
70.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
64.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
63.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
62.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
61.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
54.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
54.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
47.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
34.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
30.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
28.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
22.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
10.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
7.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDC2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
104.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
511.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
411.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
407.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
398.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
382.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
330.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
319.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
281.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
279.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
258.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
249.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
245.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
244.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
231.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
227.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
225.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
214.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
214.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
211.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
208.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
207.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
204.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
202.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
201.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
200.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
197.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
197.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
195.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
194.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
193.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
193.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
191.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
190.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
189.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
187.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
187.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
186.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
186.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
186.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
185.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
184.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
184.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
180.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
180.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
180.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
177.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
176.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
176.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
175.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
175.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
174.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
173.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
173.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
173.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
173.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
171.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
171.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
170.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
169.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
169.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
168.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
167.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
166.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
165.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
165.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
165.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
164.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
164.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
164.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
164.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
163.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
163.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
163.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
162.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
162.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
161.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
161.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
160.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
159.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
159.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
159.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
158.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
158.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
158.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
157.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
157.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
156.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
155.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
153.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
153.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
152.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
152.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
151.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
151.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
150.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
150.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
147.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
147.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
146.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
146.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
146.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
146.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
145.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
145.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
145.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
145.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
144.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
144.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
144.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
144.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
143.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
143.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
143.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
142.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
142.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
142.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
142.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
141.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
140.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
140.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
140.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
140.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
139.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
139.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
138.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
138.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
138.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
137.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
137.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
137.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
137.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
136.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
136.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
136.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
136.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
135.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
134.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
134.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
133.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
133.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
132.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
131.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
131.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
131.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
130.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
130.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
129.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
129.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
128.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
128.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
127.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
127.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
127.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
126.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
126.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
126.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
126.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
125.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
125.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
125.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
125.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
125.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
124.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
124.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
124.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
124.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
124.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
123.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
123.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
123.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
123.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
123.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
123.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
122.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
122.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
121.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
121.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
120.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
120.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
119.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
119.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
118.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
118.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
118.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
117.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
116.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
116.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
116.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
116.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
116.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
115.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
115.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
115.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
114.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
114.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
114.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
113.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
112.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
112.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
112.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
112.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
111.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
111.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
111.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
111.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
111.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
111.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
110.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
110.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
110.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
110.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
109.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
108.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
107.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
107.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
107.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
107.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
106.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
106.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
106.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
105.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
105.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
105.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
104.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
104.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
104.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
104.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
104.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
104.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
104.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
104.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
103.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
103.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
103.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
103.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
102.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
102.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
102.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
101.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
101.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
101.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
101.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
101.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
101.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
101.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
100.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
100.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
100.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
100.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
99.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
99.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
98.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
98.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
98.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
97.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
97.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
96.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
96.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
96.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
95.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
95.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
95.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
95.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
95.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
94.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
94.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
94.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
94.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
94.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
93.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
93.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
92.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
92.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
92.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
92.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
92.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
92.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
92.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
92.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
91.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
91.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
91.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
90.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
90.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
90.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
90.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
90.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
89.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
89.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
89.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
89.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
88.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
88.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
88.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
88.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
88.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
88.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
88.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
87.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
87.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
87.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
87.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
86.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
86.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
86.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
86.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
86.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
85.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
85.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
85.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
84.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
84.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
84.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
84.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
84.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
84.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
84.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
84.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
83.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
83.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
83.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
83.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
83.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
83.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
82.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
81.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
81.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
81.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
81.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
81.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
80.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
80.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
80.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
80.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
80.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
80.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
79.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
79.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
78.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
78.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
78.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
78.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
78.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
78.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
78.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
77.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
77.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
76.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
76.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
76.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
76.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
75.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
75.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
75.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
75.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
74.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
74.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
74.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
74.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
73.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
73.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
73.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
73.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
72.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
72.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
72.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
71.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
71.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
71.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
71.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
70.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
69.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
69.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
69.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
68.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
68.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
68.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
68.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
67.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
66.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
65.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
65.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
65.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
64.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
64.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
62.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
62.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
62.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
62.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
62.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
61.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
61.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
61.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
60.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
60.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
60.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
60.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
59.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
59.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
59.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
59.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
58.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
57.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
57.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
56.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
56.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
55.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
54.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
54.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
54.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
53.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
53.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
53.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
53.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
51.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
50.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
50.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
50.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
49.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
49.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
48.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
48.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
48.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
48.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
48.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
48.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
48.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
48.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
48.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
48.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
47.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
47.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
47.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
47.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
47.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
47.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
46.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
46.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
46.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
45.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
44.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
44.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
44.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
44.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
43.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
43.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
42.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
42.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
42.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
41.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
41.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
40.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
40.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
39.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
39.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
39.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
39.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
38.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
36.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
36.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
36.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
35.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
35.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
34.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
33.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
33.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
33.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
32.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
32.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
32.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
32.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
32.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
30.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
30.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
30.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
29.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
29.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
29.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
27.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
27.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
26.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
26.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
25.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
25.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
25.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
25.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
24.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
24.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
24.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
24.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
23.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
23.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
23.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
22.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
22.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
22.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
22.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
21.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
21.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
20.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
19.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
18.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
18.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
18.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
16.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
15.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
15.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
14.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
12.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
9.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
7.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDC2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
105.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
354.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
231.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
229.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
228.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
203.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
202.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
197.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
184.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
180.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
173.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
171.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
171.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
171.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
162.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
161.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
161.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
160.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
153.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
152.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
149.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
146.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
144.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
140.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
137.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
137.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
135.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
132.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
132.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
128.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
126.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
126.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
125.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
122.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
122.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
121.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
121.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
120.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
119.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
115.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
114.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
113.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
112.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
112.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
110.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
110.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
106.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
105.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
103.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
102.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
99.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
99.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
99.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
97.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
95.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
95.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
92.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
92.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
91.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
88.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
87.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
87.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
86.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
85.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
85.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
84.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
84.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
84.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
83.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
80.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
78.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
76.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
74.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
73.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
72.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
71.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
65.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
59.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
58.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
56.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
56.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
56.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
53.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
52.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
51.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
50.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
46.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
46.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
44.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
36.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
36.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
34.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
34.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
33.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
22.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDC2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
256.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
252.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
242.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
235.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
232.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
229.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
212.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
210.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
210.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
200.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
190.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
186.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
180.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
165.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
165.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
164.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
161.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
160.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
156.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
152.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
152.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
138.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
135.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
133.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
128.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
128.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
126.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
126.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
124.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
123.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
122.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
121.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
121.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
119.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
117.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
115.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
115.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
114.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
114.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
114.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
111.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
110.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
109.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
108.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
107.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
105.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
104.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
103.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
102.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
100.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
100.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
100.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
100.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
99.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
97.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
97.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
97.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
96.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
95.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
94.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
93.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
93.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
92.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
92.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
91.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
90.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
90.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
89.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
88.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
88.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
88.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
87.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
87.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
86.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
84.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
84.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
83.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
83.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
82.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
81.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
81.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
80.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
79.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
79.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
79.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
74.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
74.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
74.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
74.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
73.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
73.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
72.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
72.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
72.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
72.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
72.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
71.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
71.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
71.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
70.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
68.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
68.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
67.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
67.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
66.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
64.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
64.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
64.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
64.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
64.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
63.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
62.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
62.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
62.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
60.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
60.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
60.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
60.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
60.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
60.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
59.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
56.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
55.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
55.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
54.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
54.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
54.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
54.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
54.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
54.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
53.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
53.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
53.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
53.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
51.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
51.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
51.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
50.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
49.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
49.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
48.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
48.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
47.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
47.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
47.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
46.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
46.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
46.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
45.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
45.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
45.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
44.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
44.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
43.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
43.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
43.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
43.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
43.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
43.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
43.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
42.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
42.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
42.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
42.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
42.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
41.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
41.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
41.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
41.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
40.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
40.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
39.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
39.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
39.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
39.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
39.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
38.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
38.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
37.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
37.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
37.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
37.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
37.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
35.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
35.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
34.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
34.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
34.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
33.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
33.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
33.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
33.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
32.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
32.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
32.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
31.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
31.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
31.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
31.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
31.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
31.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
31.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
31.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
30.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
30.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
30.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
29.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
29.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
28.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
28.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
28.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
28.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
27.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
27.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
27.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
27.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
27.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
27.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
26.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
26.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
25.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
25.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
25.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
25.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
24.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
24.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
24.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
23.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
23.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
23.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
22.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
21.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
20.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
20.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
20.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
19.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
19.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
18.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
18.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
18.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
17.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
16.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
16.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
15.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
15.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
15.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
15.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
14.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
14.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
14.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
13.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
12.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
11.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
11.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
10.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
9.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
7.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
6.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
4.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
2.6
CPT0078660003
Tumor
2.0
CPT0001260009
Tumor
1.5
CPT0088970003
Tumor
1.1
CPT0078800003
Tumor
1.0
CPT0001510001
Normal
0.9
CPT0025170003
Tumor
0.8
CPT0001230001
Normal
0.8
CPT0066430001
Normal
0.8
CPT0078930003
Tumor
0.7
CPT0079510001
Normal
0.7
CPT0071150004
Tumor
0.7
CPT0065750003
Tumor
0.7
CPT0001220008
Tumor
0.7
CPT0015910003
Tumor
0.6
CPT0079230003
Tumor
0.6
CPT0012640003
Normal
0.6
CPT0066470004
Tumor
0.6
CPT0069190001
Normal
0.6
CPT0012280003
Tumor
0.6
CPT0007320003
Tumor
0.6
CPT0086030003
Tumor
0.5
CPT0025920001
Normal
0.5
CPT0069000003
Tumor
0.5
CPT0065870003
Tumor
0.5
CPT0007860003
Tumor
0.5
CPT0088570001
Normal
0.5
CPT0066480003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0066520001
Normal
0.4
CPT0079180003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0001550001
Normal
0.4
CPT0020020001
Normal
0.3
CPT0014160003
Tumor
0.3
CPT0088500001
Normal
0.3
CPT0092790003
Tumor
0.3
CPT0012770003
Normal
0.3
CPT0025580004
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0065820001
Normal
0.3
CPT0023690003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0063330001
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0088640003
Normal
0.2
CPT0079300001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0019160001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0077320001
Normal
0.2
CPT0089460004
Tumor
0.2
CPT0077500001
Normal
0.2
CPT0019990003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0026420001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0006730001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0092310003
Normal
0.0
CPT0078670001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0086890003
Normal
0.0
CPT0025610001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0014470001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0010120001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0088920001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0079430001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0014450004
Tumor
-0.2
CPT0012570003
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0065430003
Tumor
-0.2
CPT0015730003
Tumor
-0.2
CPT0023710001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0088480003
Tumor
-0.2
CPT0023350003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0001540009
Tumor
-0.3
CPT0086970003
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0076330003
Tumor
-0.3
CPT0092800003
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0001340003
Tumor
-0.3
CPT0088760003
Tumor
-0.3
CPT0078990003
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0079000001
Normal
-0.3
CPT0000870016
Tumor
-0.3
CPT0006950001
Normal
-0.3
CPT0077110003
Tumor
-0.3
CPT0069160003
Tumor
-0.3
CPT0075130003
Tumor
-0.4
CPT0088710001
Normal
-0.4
CPT0024680001
Normal
-0.4
CPT0092290003
Tumor
-0.4
CPT0011410003
Tumor
-0.4
CPT0002370001
Normal
-0.4
CPT0002270011
Tumor
-0.4
CPT0019130003
Tumor
-0.5
CPT0006440003
Tumor
-0.5
CPT0078530001
Normal
-0.5
CPT0076350001
Normal
-0.5
CPT0025110003
Tumor
-0.5
CPT0000890001
Normal
-0.5
CPT0002350011
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0088780001
Normal
-0.6
CPT0081990003
Tumor
-0.6
CPT0079270003
Tumor
-0.7
CPT0020120003
Tumor
-0.7
CPT0078510003
Tumor
-0.8
CPT0088690003
Tumor
-0.8
CPT0063630003
Tumor
-0.8
CPT0081880003
Tumor
-0.9
CPT0012180003
Tumor
-0.9
CPT0025880003
Tumor
-1.0
CPT0000780007
Tumor
-1.2
CPT0012670003
Tumor
-1.3
CPT0012920003
Normal
N/A
CPT0021240003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0009020003
Normal
N/A
CPT0017410003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0009080003
Normal
N/A
CPT0009060003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.