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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LMAN2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
145.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
497.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
274.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
265.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
251.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
223.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
223.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
222.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
221.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
217.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
205.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
200.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
196.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
194.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
192.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
191.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
189.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
188.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
180.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
171.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
165.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
164.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
163.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
159.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
155.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
154.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
151.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
143.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
141.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
140.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
140.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
139.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
130.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
130.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
128.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
127.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
125.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
122.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
121.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
120.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
120.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
119.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
119.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
118.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
113.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
113.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
110.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
107.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
98.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
97.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
85.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
83.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
80.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
79.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
78.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
76.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
76.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
74.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
71.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
68.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
65.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
63.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
60.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
57.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LMAN2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
181.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
632.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
427.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
396.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
392.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
385.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
368.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
358.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
346.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
342.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
341.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
341.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
340.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
340.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
334.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
333.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
332.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
327.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
322.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
321.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
316.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
316.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
304.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
304.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
302.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
300.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
299.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
298.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
295.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
295.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
295.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
294.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
291.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
288.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
287.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
286.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
285.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
284.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
283.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
281.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
280.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
279.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
277.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
275.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
275.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
273.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
273.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
272.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
272.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
272.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
271.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
270.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
268.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
265.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
264.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
262.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
261.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
258.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
258.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
258.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
258.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
258.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
254.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
252.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
252.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
252.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
251.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
251.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
248.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
248.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
247.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
247.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
246.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
246.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
246.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
243.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
243.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
243.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
242.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
241.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
241.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
240.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
239.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
238.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
237.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
237.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
236.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
235.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
235.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
235.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
235.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
234.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
234.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
233.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
233.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
233.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
232.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
232.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
231.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
230.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
230.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
229.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
229.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
229.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
228.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
228.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
228.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
227.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
226.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
226.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
226.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
226.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
224.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
224.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
224.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
224.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
223.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
221.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
221.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
221.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
220.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
219.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
219.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
218.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
217.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
217.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
216.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
215.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
213.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
213.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
213.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
212.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
211.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
211.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
211.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
210.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
210.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
210.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
209.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
209.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
207.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
207.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
206.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
205.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
205.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
205.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
204.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
204.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
203.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
202.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
202.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
202.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
202.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
201.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
201.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
200.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
200.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
200.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
199.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
199.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
199.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
198.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
197.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
197.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
196.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
196.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
196.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
196.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
196.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
196.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
196.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
196.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
195.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
195.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
194.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
194.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
193.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
193.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
193.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
192.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
192.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
192.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
192.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
192.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
192.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
192.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
191.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
191.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
191.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
191.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
191.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
190.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
190.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
190.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
189.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
189.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
189.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
189.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
189.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
188.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
188.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
188.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
188.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
187.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
187.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
187.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
187.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
186.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
186.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
186.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
186.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
186.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
185.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
185.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
185.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
185.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
185.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
184.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
183.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
183.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
183.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
183.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
182.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
182.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
182.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
182.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
182.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
182.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
181.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
181.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
181.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
181.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
181.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
181.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
180.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
180.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
180.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
180.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
180.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
179.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
178.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
178.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
178.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
178.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
178.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
178.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
178.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
177.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
177.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
176.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
176.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
176.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
176.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
176.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
175.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
175.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
174.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
174.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
174.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
173.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
173.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
173.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
172.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
172.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
172.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
172.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
171.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
171.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
171.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
171.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
170.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
170.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
170.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
170.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
170.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
170.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
169.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
169.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
169.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
169.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
169.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
169.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
168.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
168.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
168.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
168.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
168.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
168.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
167.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
167.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
167.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
166.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
165.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
164.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
164.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
163.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
163.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
163.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
163.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
163.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
162.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
162.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
162.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
162.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
161.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
161.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
161.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
161.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
160.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
159.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
159.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
159.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
159.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
159.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
159.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
158.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
158.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
158.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
158.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
158.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
157.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
157.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
157.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
157.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
156.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
156.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
156.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
156.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
155.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
155.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
155.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
155.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
155.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
155.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
154.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
153.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
153.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
153.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
152.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
152.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
152.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
151.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
151.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
151.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
151.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
151.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
151.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
150.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
150.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
150.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
149.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
149.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
149.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
149.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
149.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
148.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
148.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
148.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
148.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
148.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
148.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
148.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
147.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
147.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
147.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
147.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
146.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
146.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
146.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
146.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
146.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
145.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
144.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
144.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
144.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
144.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
144.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
144.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
144.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
143.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
143.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
143.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
143.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
142.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
142.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
142.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
142.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
142.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
142.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
141.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
140.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
140.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
140.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
140.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
139.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
139.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
139.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
139.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
139.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
137.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
137.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
137.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
137.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
136.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
136.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
135.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
135.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
135.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
134.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
134.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
134.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
132.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
132.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
132.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
132.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
132.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
132.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
131.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
131.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
131.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
131.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
131.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
130.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
130.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
130.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
129.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
129.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
129.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
128.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
127.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
127.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
127.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
125.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
125.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
125.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
125.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
125.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
124.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
124.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
124.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
123.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
123.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
123.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
122.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
121.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
119.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
119.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
119.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
118.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
118.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
118.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
118.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
117.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
117.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
116.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
116.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
116.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
116.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
115.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
115.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
115.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
115.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
115.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
114.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
114.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
113.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
113.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
111.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
111.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
110.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
110.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
110.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
109.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
109.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
109.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
108.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
108.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
106.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
106.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
106.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
105.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
105.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
104.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
103.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
102.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
100.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
99.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
99.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
98.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
98.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
97.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
95.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
94.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
93.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
93.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
93.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
91.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
91.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
90.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
90.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
88.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
88.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
88.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
87.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
87.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
85.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
82.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
78.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
78.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
77.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
76.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
75.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
75.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
68.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
68.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
68.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
66.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
55.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
43.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
39.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
19.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LMAN2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
174.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
369.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
346.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
340.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
336.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
318.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
309.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
294.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
285.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
272.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
271.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
258.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
258.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
253.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
253.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
245.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
244.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
225.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
225.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
222.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
220.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
219.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
219.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
219.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
218.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
208.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
208.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
207.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
206.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
203.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
202.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
196.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
196.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
195.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
185.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
183.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
182.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
181.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
180.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
178.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
177.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
175.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
172.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
172.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
170.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
169.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
168.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
168.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
163.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
163.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
158.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
158.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
156.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
156.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
156.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
155.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
155.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
154.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
154.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
151.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
150.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
150.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
148.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
148.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
147.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
147.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
143.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
142.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
140.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
139.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
138.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
137.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
136.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
133.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
132.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
132.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
132.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
129.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
127.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
124.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
124.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
123.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
122.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
122.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
122.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
121.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
119.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
118.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
115.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
113.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
111.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
108.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
108.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
88.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
84.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
81.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
74.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
69.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
63.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
52.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LMAN2 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
182.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
640.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
492.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
445.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
424.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
406.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
399.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
394.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
365.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
362.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
357.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
354.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
351.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
338.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
337.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
335.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
323.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
322.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
320.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
320.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
310.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
309.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
305.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
301.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
296.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
290.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
289.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
286.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
280.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
276.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
273.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
269.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
262.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
254.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
254.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
250.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
248.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
246.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
242.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
240.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
238.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
238.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
237.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
236.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
235.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
234.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
231.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
229.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
228.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
228.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
227.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
227.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
225.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
225.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
223.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
223.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
221.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
220.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
218.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
216.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
216.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
214.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
214.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
214.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
213.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
211.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
209.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
209.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
208.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
208.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
207.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
207.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
206.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
205.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
203.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
203.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
202.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
201.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
201.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
200.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
199.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
199.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
199.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
198.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
198.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
196.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
196.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
195.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
195.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
195.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
194.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
194.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
194.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
193.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
193.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
191.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
191.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
191.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
190.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
190.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
189.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
189.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
188.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
188.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
187.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
186.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
186.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
184.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
184.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
183.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
183.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
181.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
181.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
181.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
180.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
180.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
180.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
179.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
179.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
179.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
178.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
177.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
177.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
177.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
177.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
177.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
177.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
176.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
176.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
175.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
175.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
175.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
174.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
174.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
173.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
173.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
172.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
172.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
171.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
171.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
171.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
168.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
168.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
167.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
167.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
166.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
166.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
166.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
166.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
165.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
165.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
165.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
164.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
164.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
164.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
164.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
163.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
163.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
162.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
162.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
162.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
162.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
161.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
161.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
161.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
161.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
161.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
161.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
160.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
160.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
158.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
157.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
157.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
157.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
157.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
156.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
156.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
156.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
155.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
155.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
154.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
154.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
153.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
152.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
152.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
152.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
151.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
150.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
149.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
149.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
148.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
148.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
148.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
148.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
147.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
147.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
147.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
147.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
146.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
146.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
146.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
146.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
144.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
144.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
144.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
144.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
143.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
143.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
142.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
138.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
138.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
136.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
136.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
135.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
134.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
134.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
134.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
133.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
132.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
132.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
132.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
131.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
131.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
129.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
129.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
129.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
129.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
128.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
128.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
128.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
127.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
126.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
126.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
126.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
125.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
123.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
122.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
122.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
122.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
122.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
120.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
118.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
117.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
117.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
116.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
115.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
115.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
114.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
112.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
110.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
109.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
108.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
108.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
108.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
108.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
108.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
106.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
104.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
103.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
102.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
100.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
100.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
99.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
98.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
95.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
94.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
93.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
87.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
83.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
81.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
80.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
78.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
78.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
75.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
75.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
74.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
70.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
68.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
65.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
65.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
63.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
60.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
27.6
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0086820003
Tumor
1.3
CPT0012180003
Tumor
1.2
CPT0023350003
Tumor
1.2
CPT0076330003
Tumor
1.1
CPT0015730003
Tumor
1.1
CPT0001180009
Tumor
1.0
CPT0014450004
Tumor
1.0
CPT0007320003
Tumor
1.0
CPT0001340003
Tumor
1.0
CPT0012280003
Tumor
0.9
CPT0025050003
Tumor
0.8
CPT0012670003
Tumor
0.8
CPT0063630003
Tumor
0.8
CPT0024670003
Tumor
0.8
CPT0069160003
Tumor
0.7
CPT0092160003
Tumor
0.7
CPT0011410003
Tumor
0.7
CPT0088690003
Tumor
0.7
CPT0075130003
Tumor
0.7
CPT0065750003
Tumor
0.7
CPT0020120003
Tumor
0.7
CPT0089020003
Tumor
0.7
CPT0086360003
Tumor
0.6
CPT0012550003
Tumor
0.6
CPT0088480003
Tumor
0.6
CPT0025110003
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0078930003
Tumor
0.6
CPT0078800003
Tumor
0.6
CPT0085670003
Tumor
0.6
CPT0079410003
Tumor
0.6
CPT0075560003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0015810003
Tumor
0.5
CPT0065430003
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0025290003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0077310003
Tumor
0.5
CPT0014160003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0089460004
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0066470004
Tumor
0.4
CPT0007860003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0001260009
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0010160003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0078660003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0012080003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0009060003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0075720003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0079180003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0001350001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0075170001
Normal
-0.3
CPT0069190001
Normal
-0.3
CPT0069000003
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0006530001
Normal
-0.3
CPT0078830003
Tumor
-0.3
CPT0079510001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0001270001
Normal
-0.4
CPT0088780001
Normal
-0.4
CPT0065450001
Normal
-0.4
CPT0011240003
Tumor
-0.4
CPT0079430001
Normal
-0.4
CPT0002270011
Tumor
-0.4
CPT0006950001
Normal
-0.4
CPT0065820001
Normal
-0.4
CPT0081620001
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0066520001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0077500001
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0092740003
Normal
-0.4
CPT0025060001
Normal
-0.4
CPT0075570001
Normal
-0.4
CPT0012090003
Normal
-0.4
CPT0079300001
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0088500001
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0092310003
Normal
-0.4
CPT0002370001
Normal
-0.5
CPT0014350001
Normal
-0.5
CPT0000660001
Normal
-0.5
CPT0082010001
Normal
-0.5
CPT0017450001
Normal
-0.5
CPT0000790001
Normal
-0.5
CPT0078940001
Normal
-0.5
CPT0025610001
Normal
-0.5
CPT0086830003
Normal
-0.5
CPT0092800003
Normal
-0.5
CPT0018250001
Normal
-0.5
CPT0025920001
Normal
-0.5
CPT0014470001
Normal
-0.5
CPT0066430001
Normal
-0.5
CPT0088640003
Normal
-0.5
CPT0007470001
Normal
-0.5
CPT0086970003
Normal
-0.5
CPT0078670001
Normal
-0.5
CPT0069010001
Normal
-0.5
CPT0087050003
Normal
-0.5
CPT0012570003
Normal
-0.5
CPT0026420001
Normal
-0.5
CPT0019160001
Normal
-0.6
CPT0012770003
Normal
-0.6
CPT0007870001
Normal
-0.6
CPT0001230001
Normal
-0.6
CPT0001510001
Normal
-0.6
CPT0086890003
Normal
-0.6
CPT0020130001
Normal
-0.6
CPT0020020001
Normal
-0.7
CPT0064400001
Normal
-0.7
CPT0086370003
Normal
-0.7
CPT0012640003
Normal
-0.7
CPT0024680001
Normal
-0.7
CPT0009020003
Normal
-0.7
CPT0079000001
Normal
-0.7
CPT0001550001
Normal
-0.7
CPT0009080003
Normal
-0.8
CPT0012920003
Normal
-0.8
CPT0088970003
Tumor
-0.9
CPT0017410003
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
