HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:44.3 nTPM
HPA Brain:26.1 nTPM
GTEx:44.3 nTPM
FANTOM5:22.2 Scaled Tags Per Million
Pig:36.1 nTPM
Mouse:27.6 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041567Antibody HPA043091
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 26.1
Sample id Sample description nTPM
Hippocampus
nTPM: 24.8
1898 Male, age 80, left hemisphere 31.7
2529 Female, age 94, left hemisphere 29.2
1911 Female, age 85, right hemisphere 22.9
2148 Female, age 91, left hemisphere 22.8
2621 Female, age 67, right hemisphere 21.7
1855 Male, age 76, left hemisphere 20.8
Dentate gyrus
nTPM: 24.1
2530 Female, age 94, left hemisphere 29.2
2010 Male, age 76, both hemispheres 24.9
1927 Female, age 91, both hemispheres 24.7
2246 Female, age 85, both hemispheres 23.5
2528 Male, age 74, both hemispheres 23.5
2531 Female, age 67, both hemispheres 18.8
Entorhinal gyrus
nTPM: 23.5
2117 Female, age 91, right hemisphere 28.9
1938 Female, age 85, left hemisphere 27.4
2764 Male, age 80, right hemisphere 25.2
1787 Male, age 76, left hemisphere 23.0
2686 Male, age 75, right hemisphere 18.2
2613 Female, age 94, left hemisphere 18.1
Hippocampus, CA1
nTPM: 25.0
1873 Female, age 85, both hemispheres 29.8
2749 Male, age 80, left hemisphere 26.8
2527 Male, age 74, both hemispheres 26.0
2082 Female, age 91, right hemisphere 23.1
2045 Male, age 76, both hemispheres 19.5
Hippocampus, CA2
nTPM: 26.1
2249 Male, age 74, both hemispheres 29.6
1892 Male, age 76, both hemispheres 28.8
1963 Male, age 80, left hemisphere 27.8
1940 Female, age 85, left hemisphere 24.4
2113 Female, age 91, right hemisphere 23.8
2437 Female, age 94, left hemisphere 22.4
Hippocampus, CA3
nTPM: 23.9
2436 Male, age 74, both hemispheres 28.4
1867 Male, age 76, both hemispheres 25.3
1891 Female, age 85, both hemispheres 24.6
2620 Female, age 94, left hemisphere 23.8
2137 Male, age 80, left hemisphere 23.5
2861 Female, age 67, both hemispheres 17.8
Parahippocampal cortex
nTPM: 23.2
1933 Female, age 85, both hemispheres 28.4
2250 Female, age 67, right hemisphere 27.7
1850 Male, age 80, both hemispheres 26.7
1990 Female, age 91, right hemisphere 25.2
2692 Male, age 74, both hemispheres 24.9
2245 Female, age 91, both hemispheres 23.5
2532 Female, age 72, left hemisphere 21.9
2018 Male, age 76, both hemispheres 19.4
2622 Female, age 67, right hemisphere 17.1
2693 Female, age 94, both hemispheres 16.5
Perirhinal gyrus
nTPM: 24.5
1794 Male, age 80, right hemisphere 27.5
1847 Female, age 91, left hemisphere 26.2
1841 Female, age 85, right hemisphere 25.7
2848 Male, age 76, right hemisphere 22.0
2521 Female, age 94, right hemisphere 20.8
Subiculum
nTPM: 25.7
1977 Female, age 85, both hemispheres 27.8
1901 Male, age 80, both hemispheres 27.2
2438 Female, age 94, left hemisphere 26.1
2619 Male, age 74, both hemispheres 25.6
2042 Male, age 76, both hemispheres 25.4
2729 Female, age 91, right hemisphere 22.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 44.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.3
Samples: 197

Max nTPM: 77.4
Min nTPM: 27.0
Std nTPM: 8.1
Median nTPM: 43.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 77.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 70.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 69.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 65.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 61.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 61.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 60.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 60.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 60.0
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 58.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 58.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 22.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.2
FF:10169-103B7 60 years, female 23.8
FF:10153-102I9 76 years, female 20.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 36.1
Pig sample Sample description nTPM
Subiculum
nTPM: 30.0
Samples: 4

Max nTPM: 40.0
Min nTPM: 25.3
Sample A Female 40.0
Sample B Female 26.4
Sample C Male 28.3
Sample D Male 25.3
Dorsal hippocampus
nTPM: 36.1
Samples: 4

Max nTPM: 43.4
Min nTPM: 30.4
Sample A Female 43.4
Sample B Female 32.9
Sample C Male 37.6
Sample D Male 30.4
Entorhinal cortex
nTPM: 31.1
Samples: 4

Max nTPM: 33.8
Min nTPM: 25.7
Sample A Female 33.2
Sample B Female 33.8
Sample C Male 31.5
Sample D Male 25.7
Ventral hippocampus
nTPM: 34.2
Samples: 4

Max nTPM: 39.9
Min nTPM: 28.8
Sample A Female 33.2
Sample B Female 28.8
Sample C Male 39.9
Sample D Male 34.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 27.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 28.8
Min nTPM: 22.7
Sample A Male 23.1
Sample B Male 22.7
Sample C Female 28.8
Sample D Female 26.3
Hippocampal formation
nTPM: 27.6
Samples: 4

Max nTPM: 31.2
Min nTPM: 23.5
Sample A Male 31.2
Sample B Male 24.9
Sample C Female 23.5
Sample D Female 30.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
68637515 Antisense, RP_050126_01_A10, Mouse strain C57BL/6J (56 days, male) 0.8

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