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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
48.7
nTPM
HPA Brain:
29.3
nTPM
GTEx:
48.7
nTPM
FANTOM5:
22.3
Scaled Tags Per Million
Pig:
28.3
nTPM
Mouse:
28.1
nTPM
Allen mouse:
1.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
29.3
Sample id
Sample description
nTPM
Amygdala nTPM: 29.3
2695
Female, age 67, right hemisphere
32.6
2814
Male, age 76, right hemisphere
32.1
1987
Female, age 91, left hemisphere
30.4
2514
Male, age 75, right hemisphere
28.8
2517
Female, age 94, left hemisphere
22.5
Basal amygdala nTPM: 22.1
2609
Male, age 75, right hemisphere
31.8
1955
Male, age 76, both hemispheres
23.6
2110
Male, age 80, left hemisphere
21.5
2243
Female, age 91, right hemisphere
20.7
2685
Female, age 94, left hemisphere
18.9
2827
Female, age 67, right hemisphere
15.9
Central amygdala nTPM: 25.7
1905
Male, age 76, both hemispheres
32.4
2515
Male, age 75, right hemisphere
28.8
2826
Female, age 94, left hemisphere
23.6
2701
Female, age 91, right hemisphere
22.9
2239
Male, age 80, left hemisphere
21.0
Corticomedial amygdala nTPM: 22.5
2428
Male, age 75, right hemisphere
27.9
2429
Female, age 94, left hemisphere
24.4
2240
Male, age 76, both hemispheres
23.6
2829
Male, age 80, left hemisphere
23.4
2242
Female, age 91, right hemisphere
21.4
2535
Female, age 67, right hemisphere
14.2
Lateral amygdala nTPM: 24.0
1883
Male, age 76, both hemispheres
30.8
2516
Male, age 75, right hemisphere
27.7
2534
Female, age 94, left hemisphere
24.8
2256
Male, age 80, left hemisphere
23.8
2255
Female, age 91, right hemisphere
19.5
2830
Female, age 67, right hemisphere
17.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
48.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 48.7
Samples: 152
Max nTPM: 105.1
Min nTPM: 22.5
Std nTPM: 12.8
Median nTPM: 46.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
105.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
96.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
93.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
87.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
84.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
83.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
76.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
74.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
73.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
70.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
69.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
66.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
63.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
63.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
63.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
62.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
62.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
61.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
59.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
59.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
58.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
58.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
58.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
57.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
57.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
57.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
56.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
56.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
55.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
55.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
55.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
54.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
53.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
53.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
53.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
53.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
53.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
53.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
53.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
53.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
52.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
52.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
52.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
52.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
52.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
52.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
51.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
51.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
50.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
50.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
50.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
50.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
50.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
49.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
49.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
49.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
49.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
49.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
49.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
49.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
49.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
48.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
48.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
48.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
48.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
47.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
47.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
47.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
47.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
47.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
47.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
47.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
47.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
46.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
46.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
46.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
46.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
46.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
46.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
46.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
46.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
46.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
46.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
46.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
45.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
45.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
45.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
45.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
45.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
45.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
45.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
45.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
45.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
44.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
44.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
44.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
44.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
43.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
43.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
43.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
43.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
42.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
42.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
42.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
42.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
42.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
42.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
42.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
42.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
42.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
41.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
41.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
41.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
41.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
41.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
41.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
40.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
39.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
39.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
39.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
39.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
38.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
38.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
38.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
38.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
38.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
38.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
37.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
37.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
37.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
37.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
37.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
37.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
37.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
37.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
36.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
36.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
35.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
35.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
34.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
34.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
33.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
33.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
33.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
32.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
32.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
32.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
32.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
29.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
28.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
25.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
22.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
28.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 28.2
Samples: 4
Max nTPM: 31.4
Min nTPM: 25.7
Sample A
Male
26.9
Sample B
Male
31.4
Sample C
Female
25.7
Sample D
Female
28.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
