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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
241.3
nTPM
GTEx:
241.3
nTPM
FANTOM5:
222.8
Scaled Tags Per Million
Pig:
119.8
nTPM
Mouse:
128.0
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
241.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 241.3
Samples: 105
Max nTPM: 663.6
Min nTPM: 93.6
Std nTPM: 115.1
Median nTPM:
491_1
89 years, female
663.6
308_1
70 years, female
623.5
311_1
78 years, male
583.3
139_1
64 years, female
523.8
322_1
76 years, male
510.4
317_1
60 years, male
489.6
495_1
57 years, female
453.0
109_1
81 years, female
420.7
315_1
62 years, female
420.0
117_1
61 years, male
417.6
41_1
94 years, female
412.3
6_1
73 years, female
400.1
119_1
70 years, female
396.9
137_1
83 years, male
353.0
162_1
79 years, female
352.2
350_1
84 years, female
346.6
43_1
64 years, female
342.4
447_1
81 years, male
333.1
142_1
61 years, female
330.3
218_1
71 years, female
323.2
490_1
67 years, female
323.2
288_1
66 years, female
310.7
4_1
88 years, female
307.2
394_1
75 years, female
301.1
17_1
71 years, male
300.8
145_1
84 years, male
294.6
379_1
60 years, male
294.1
313_1
79 years, female
292.8
354_1
81 years, female
292.3
348_1
84 years, male
291.1
396_1
62 years, male
290.8
335_1
73 years, female
281.1
173_1
67 years, male
269.7
307_1
66 years, female
266.6
415_1
77 years, female
264.1
389_1
86 years, female
260.5
120_1
70 years, female
255.3
349_1
83 years, male
249.7
35_1
74 years, female
248.6
452_1
88 years, female
247.1
501_1
88 years, male
243.2
324_1
76 years, male
231.4
89_1
63 years, male
230.7
99_1
64 years, male
216.5
266_1
85 years, male
215.1
189_1
76 years, male
210.2
351_1
91 years, male
206.5
18_1
88 years, male
206.3
32_1
67 years, male
204.2
2_1
77 years, female
203.7
293_1
68 years, female
203.7
353_1
82 years, female
203.0
386_1
76 years, male
201.6
413_1
59 years, female
196.4
149_1
88 years, male
195.5
314_1
67 years, male
194.0
347_1
72 years, male
194.0
291_1
76 years, male
193.6
466_1
57 years, female
189.1
414_1
84 years, female
187.9
265_1
87 years, male
186.0
115_1
83 years, male
185.5
320_1
89 years, female
184.1
316_1
62 years, male
182.4
254_1
77 years, female
182.2
126_1
63 years, male
178.7
9_1
66 years, female
178.6
286_1
68 years, female
178.2
499_1
55 years, female
178.1
384_1
83 years, male
176.7
404_1
82 years, female
175.1
406_1
79 years, male
172.4
217_1
76 years, male
171.6
264_1
73 years, female
168.2
42_1
85 years, male
167.7
375_1
74 years, female
166.5
243_1
75 years, male
166.2
321_1
62 years, female
166.0
229_1
69 years, female
164.1
319_1
81 years, male
160.9
376_1
75 years, female
159.9
518_1
75 years, female
156.6
81_1
67 years, male
155.4
526_1
61 years, male
154.3
237_1
82 years, male
150.7
318_1
68 years, male
149.1
506_1
65 years, male
148.0
468_1
89 years, male
146.0
295_1
61 years, female
145.7
177_1
74 years, male
142.1
517_1
88 years, male
140.5
246_1
77 years, male
139.6
251_1
78 years, male
135.5
153_1
70 years, female
135.4
480_1
63 years, male
135.4
405_1
91 years, male
132.1
352_1
62 years, male
130.4
356_1
87 years, female
130.3
503_1
68 years, male
126.3
172_1
72 years, female
121.7
292_1
71 years, male
120.4
425_1
59 years, female
116.9
355_1
70 years, female
116.7
377_1
82 years, female
105.8
163_1
78 years, male
93.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.