We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
218.0
nTPM
FANTOM5:
315.1
Scaled Tags Per Million
Pig:
152.0
nTPM
Allen mouse:
1.5
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
218.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 186.2
2188
Female, age 91, both hemispheres
223.5
2090
Male, age 80, both hemispheres
194.5
2301
Female, age 85, both hemispheres
193.8
1984
Male, age 76, both hemispheres
133.1
Dorsal cochlear nucleus nTPM: 195.6
2058
Male, age 76, both hemispheres
203.7
2187
Female, age 91, both hemispheres
203.0
2378
Male, age 80, both hemispheres
200.7
2370
Male, age 61, both hemispheres
198.0
2802
Male, age 74, right hemisphere
172.4
Dorsal tegmental nucleus nTPM: 187.2
1936
Male, age 76, left hemisphere
210.3
2083
Male, age 80, both hemispheres
201.0
2326
Male, age 74, both hemispheres
183.1
2358
Male, age 61, both hemispheres
154.3
Dorsolateral tegmental area nTPM: 208.3
2751
Female, age 85, both hemispheres
245.1
2360
Male, age 74, both hemispheres
211.8
2654
Male, age 80, both hemispheres
203.1
2337
Male, age 61, both hemispheres
193.7
2141
Male, age 76, both hemispheres
188.0
Kolliker-Fuse nucleus nTPM: 206.1
2793
Female, age 91, left hemisphere
235.5
2315
Male, age 76, right hemisphere
216.1
2163
Male, age 80, both hemispheres
166.6
Lateral lemniscal nuclei nTPM: 197.9
2746
Female, age 85, left hemisphere
230.0
2036
Male, age 80, both hemispheres
212.3
2320
Female, age 91, left hemisphere
209.3
2453
Male, age 74, right hemisphere
188.3
2169
Male, age 76, both hemispheres
149.7
Lateral parabrachial nucleus nTPM: 218.0
2792
Male, age 76, both hemispheres
254.8
2013
Male, age 80, both hemispheres
224.9
2139
Female, age 85, right hemisphere
220.3
2790
Male, age 61, both hemispheres
172.0
Lateral vestibular nucleus nTPM: 170.9
2184
Male, age 76, both hemispheres
175.5
2311
Male, age 80, both hemispheres
166.2
Locus coeruleus nTPM: 194.4
2788
Male, age 74, unknown
206.8
1980
Male, age 76, both hemispheres
206.5
2014
Male, age 55, unknown
205.0
2317
Female, age 72, unknown
195.8
2162
Male, age 80, both hemispheres
191.4
2123
Female, age 91, both hemispheres
185.9
2720
Male, age 74, both hemispheres
169.2
Medial parabrachial nucleus nTPM: 196.6
2463
Female, age 85, right hemisphere
209.9
2786
Male, age 76, both hemispheres
208.4
2170
Female, age 91, both hemispheres
202.2
2854
Male, age 80, both hemispheres
198.0
2156
Male, age 61, both hemispheres
164.7
Medial periolivary nuclei nTPM: 202.0
2791
Male, age 74, right hemisphere
256.4
2458
Female, age 91, both hemispheres
221.4
2081
Male, age 80, both hemispheres
220.8
2171
Female, age 85, both hemispheres
180.8
2063
Male, age 76, both hemispheres
130.5
Motor facial nucleus nTPM: 187.6
2365
Male, age 74, right hemisphere
219.5
2126
Male, age 61, both hemispheres
212.5
2697
Female, age 85, both hemispheres
190.5
2795
Female, age 91, both hemispheres
189.0
2327
Male, age 80, both hemispheres
180.6
2062
Male, age 76, both hemispheres
133.8
Motor trigeminal nucleus nTPM: 189.6
2560
Male, age 74, both hemispheres
200.2
2321
Female, age 91, both hemispheres
200.0
2079
Male, age 80, both hemispheres
197.3
2309
Male, age 76, both hemispheres
190.8
2335
Male, age 61, both hemispheres
159.8
Nuclei of the trapezoid body nTPM: 181.9
2368
Female, age 91, both hemispheres
210.6
2166
Male, age 80, both hemispheres
192.9
2159
Male, age 61, both hemispheres
192.6
2735
Female, age 85, both hemispheres
177.3
1983
Male, age 76, both hemispheres
135.8
Nucleus raphe magnus nTPM: 188.6
2459
Female, age 91, both hemispheres
223.4
2455
Male, age 74, both hemispheres
198.5
2160
Male, age 61, both hemispheres
191.3
2328
Male, age 80, both hemispheres
185.9
2051
Male, age 76, both hemispheres
174.1
2172
Female, age 85, both hemispheres
158.2
Paramedian reticular nucleus nTPM: 203.1
2052
Male, age 76, both hemispheres
249.8
2313
Male, age 61, both hemispheres
190.3
2057
Male, age 80, both hemispheres
186.5
2050
Female, age 85, both hemispheres
185.9
Pedunculopontine tegmental nucleus nTPM: 192.1
2334
Male, age 80, both hemispheres
206.6
1921
Female, age 85, both hemispheres
203.2
2338
Male, age 61, both hemispheres
166.3
Pontine nuclei nTPM: 205.8
2727
Male, age 61, right hemisphere
252.3
2319
Female, age 91, both hemispheres
227.5
2115
Male, age 80, left hemisphere
224.4
2454
Male, age 74, left hemisphere
219.1
2787
Female, age 85, both hemispheres
186.3
1863
Male, age 55, unknown
181.4
2109
Female, age 72, unknown
180.4
1968
Male, age 76, left hemisphere
175.2
Pontine raphe nucleus nTPM: 191.8
2853
Male, age 76, midline
198.0
2122
Female, age 85, midline
185.6
Posteroventral cochlear nucleus nTPM: 217.6
2135
Female, age 91, both hemispheres
267.9
2070
Male, age 76, both hemispheres
229.6
2341
Male, age 80, both hemispheres
221.5
2371
Male, age 61, both hemispheres
189.8
2752
Female, age 85, both hemispheres
179.0
Principal sensory trigeminal nucleus nTPM: 196.2
2367
Female, age 91, left hemisphere
228.1
2008
Male, age 80, left hemisphere
190.9
2324
Male, age 76, both hemispheres
189.6
2158
Male, age 61, both hemispheres
176.3
Reticular pontine nucleus, caudal nTPM: 190.8
2457
Female, age 91, both hemispheres
213.7
2559
Male, age 74, both hemispheres
194.3
2332
Male, age 80, right hemisphere
187.9
2092
Male, age 76, both hemispheres
167.2
Reticular pontine nucleus, oral nTPM: 217.2
2012
Female, age 85, both hemispheres
222.6
2366
Female, age 91, both hemispheres
220.8
2361
Male, age 74, both hemispheres
220.0
1939
Male, age 80, both hemispheres
219.1
2167
Male, age 76, both hemispheres
203.3
Reticulotegmental nucleus nTPM: 183.1
2333
Male, age 80, both hemispheres
196.0
2322
Female, age 91, both hemispheres
191.1
2452
Male, age 74, both hemispheres
174.2
2325
Male, age 76, both hemispheres
171.3
Spinal trigeminal nucleus, oral nTPM: 170.7
1978
Male, age 76, both hemispheres
175.6
2737
Female, age 85, both hemispheres
170.2
2164
Male, age 80, both hemispheres
166.4
Subcoeruleus area nTPM: 195.3
2369
Female, age 85, left hemisphere
275.3
1958
Male, age 80, both hemispheres
187.1
2089
Male, age 76, left hemisphere
178.3
2323
Female, age 91, left hemisphere
176.7
2451
Male, age 74, both hemispheres
158.9
Superior olive nTPM: 206.8
2364
Male, age 74, right hemisphere
238.6
2561
Female, age 91, both hemispheres
209.8
1875
Female, age 85, both hemispheres
202.9
2329
Male, age 80, right hemisphere
193.6
2020
Male, age 76, both hemispheres
189.0
Ventral periolivary nuclei nTPM: 185.4
2794
Female, age 91, left hemisphere
204.4
2023
Male, age 76, both hemispheres
188.1
2130
Female, age 85, both hemispheres
182.0
2165
Male, age 80, both hemispheres
167.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 195.3
2840
Female, age 85, both hemispheres
217.1
2456
Female, age 91, both hemispheres
214.4
2449
Male, age 74, both hemispheres
198.4
2359
Male, age 61, both hemispheres
196.8
2161
Male, age 80, both hemispheres
181.0
1959
Male, age 76, both hemispheres
163.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
152.0
Pig sample
Sample description
nTPM
Pons nTPM: 152.0
Samples: 4
Max nTPM: 171.1
Min nTPM: 135.7
Sample A
Female
135.7
Sample B
Female
143.1
Sample C
Male
158.1
Sample D
Male
171.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
