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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GSTM4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
253.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
239.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
128.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
107.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
39.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
38.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
36.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
35.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
34.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
31.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
31.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
29.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
27.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
27.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
26.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
26.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
26.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
22.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
21.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
20.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
20.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
20.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
19.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
18.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
18.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
18.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
17.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
17.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
17.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
16.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
16.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
15.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
14.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
14.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
14.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
14.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
14.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
13.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
13.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
13.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
13.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
12.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
12.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
11.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
10.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
9.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
8.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
8.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
7.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
5.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
5.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
2.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
2.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GSTM4 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
243.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
79.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
78.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
75.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
74.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
73.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
72.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
70.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
67.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
59.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
58.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
58.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
58.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
57.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
57.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
56.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
56.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
55.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
55.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
55.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
54.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
54.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
54.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
53.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
53.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
53.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
53.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
52.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
52.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
51.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
50.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
50.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
50.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
49.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
49.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
49.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
48.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
48.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
47.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
47.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
47.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
47.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
46.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
46.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
46.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
45.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
45.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
45.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
45.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
44.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
44.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
44.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
44.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
44.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
44.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
43.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
43.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
43.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
42.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
42.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
42.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
42.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
42.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
41.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
41.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
41.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
41.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
41.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
41.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
41.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
40.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
40.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
40.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
40.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
40.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
40.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
40.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
39.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
39.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
39.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
39.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
39.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
39.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
39.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
38.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
38.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
38.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
38.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
38.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
38.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
38.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
38.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
38.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
37.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
37.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
37.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
37.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
37.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
37.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
37.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
37.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
37.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
37.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
37.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
37.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
37.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
37.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
36.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
36.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
36.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
36.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
36.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
36.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
36.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
36.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
35.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
35.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
35.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
35.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
35.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
35.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
35.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
34.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
34.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
34.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
34.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
34.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
34.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
34.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
34.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
34.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
33.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
33.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
33.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
33.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
33.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
33.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
33.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
33.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
33.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
33.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
33.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
33.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
32.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
32.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
32.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
32.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
32.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
32.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
32.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
32.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
31.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
31.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
31.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
31.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
31.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
31.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
31.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
31.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
31.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
31.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
31.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
31.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
31.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
31.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
30.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
30.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
30.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
30.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
30.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
30.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
30.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
30.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
30.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
30.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
30.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
30.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
30.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
29.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
29.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
29.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
29.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
29.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
29.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
29.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
29.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
29.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
29.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
29.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
29.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
29.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
29.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
29.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
29.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
29.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
29.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
29.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
29.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
29.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
29.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
29.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
28.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
28.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
28.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
28.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
28.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
28.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
28.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
28.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
28.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
28.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
28.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
28.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
28.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
28.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
28.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
28.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
28.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
28.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
28.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
28.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
28.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
28.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
27.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
27.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
27.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
27.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
27.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
27.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
27.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
27.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
27.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
27.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
27.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
27.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
27.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
26.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
26.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
26.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
26.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
26.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
26.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
26.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
26.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
26.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
26.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
26.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
26.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
26.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
26.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
26.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
26.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
26.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
26.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
26.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
26.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
26.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
26.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
25.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
25.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
25.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
25.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
25.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
25.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
25.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
25.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
25.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
25.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
25.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
25.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
25.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
25.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
25.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
25.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
25.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
25.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
24.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
24.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
24.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
24.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
24.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
24.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
24.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
24.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
24.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
24.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
24.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
24.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
24.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
24.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
24.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
24.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
24.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
24.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
24.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
24.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
23.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
23.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
23.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
23.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
23.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
23.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
23.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
23.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
23.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
23.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
23.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
23.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
23.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
22.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
22.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
22.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
22.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
22.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
22.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
22.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
22.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
22.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
22.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
22.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
22.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
22.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
22.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
22.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
22.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
22.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
22.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
22.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
22.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
22.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
21.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
21.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
21.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
21.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
21.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
21.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
21.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
21.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
21.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
21.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
21.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
21.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
21.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
21.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
21.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
21.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
21.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
21.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
21.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
20.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
20.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
20.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
20.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
20.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
20.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
20.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
20.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
20.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
20.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
20.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
20.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
19.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
19.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
19.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
19.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
19.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
19.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
19.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
19.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
19.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
19.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
19.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
19.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
19.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
19.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
18.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
18.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
18.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
18.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
18.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
18.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
18.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
18.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
18.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
18.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
18.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
18.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
18.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
18.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
17.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
17.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
17.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
17.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
17.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
17.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
17.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
17.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
17.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
17.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
17.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
17.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
17.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
16.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
16.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
16.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
16.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
15.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
15.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
15.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
15.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
15.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
15.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
15.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
14.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
14.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
14.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
14.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
13.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
13.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
13.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
13.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
13.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
13.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
12.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
12.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
11.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
10.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
10.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
3.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GSTM4 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
63.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
50.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
45.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
44.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
43.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
43.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
41.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
40.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
38.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
37.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
34.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
34.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
33.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
32.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
32.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
32.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
31.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
31.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
31.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
31.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
30.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
30.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
29.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
29.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
29.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
29.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
29.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
29.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
27.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
27.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
27.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
27.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
27.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
27.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
26.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
26.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
26.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
26.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
26.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
26.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
26.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
26.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
25.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
25.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
25.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
24.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
24.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
24.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
23.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
23.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
23.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
22.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
22.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
21.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
21.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
21.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
21.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
20.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
20.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
20.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
18.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
18.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
18.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
17.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
16.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
16.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
16.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
16.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
16.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
15.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
13.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
13.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
12.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GSTM4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
423.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
197.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
112.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
85.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
81.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
81.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
78.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
75.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
74.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
74.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
71.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
68.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
67.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
66.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
66.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
64.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
62.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
61.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
61.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
59.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
59.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
58.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
57.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
57.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
56.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
55.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
55.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
53.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
53.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
52.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
52.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
51.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
51.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
51.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
51.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
50.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
49.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
49.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
49.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
49.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
48.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
48.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
48.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
48.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
48.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
47.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
46.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
46.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
46.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
46.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
45.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
45.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
44.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
44.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
44.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
43.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
43.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
42.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
41.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
41.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
41.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
41.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
40.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
40.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
39.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
39.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
39.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
39.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
39.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
38.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
38.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
38.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
38.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
38.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
38.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
37.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
37.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
36.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
36.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
36.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
36.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
36.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
35.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
35.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
35.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
35.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
35.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
35.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
35.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
34.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
34.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
33.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
33.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
33.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
33.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
33.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
33.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
33.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
32.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
32.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
32.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
32.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
32.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
31.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
31.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
31.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
31.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
31.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
31.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
30.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
30.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
30.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
30.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
30.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
30.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
30.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
30.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
30.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
29.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
29.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
29.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
29.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
29.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
29.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
28.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
28.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
28.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
28.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
28.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
27.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
27.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
27.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
27.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
27.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
27.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
26.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
26.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
26.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
26.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
26.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
26.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
26.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
26.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
26.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
26.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
26.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
25.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
25.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
25.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
25.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
25.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
25.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
25.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
25.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
25.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
25.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
25.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
24.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
24.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
24.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
24.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
24.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
24.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
24.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
23.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
23.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
23.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
23.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
23.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
23.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
23.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
23.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
23.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
23.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
23.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
23.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
23.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
22.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
22.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
22.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
22.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
22.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
22.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
22.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
22.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
21.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
21.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
21.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
21.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
21.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
21.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
21.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
21.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
21.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
20.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
20.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
20.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
19.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
19.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
19.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
19.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
19.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
19.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
19.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
18.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
18.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
18.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
18.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
17.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
17.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
16.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
16.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
16.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
16.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
15.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
14.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
14.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
14.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
13.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
13.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
13.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
13.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
12.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
12.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
12.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
11.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
10.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
9.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
8.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
7.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
7.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
6.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
5.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
4.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
3.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
3.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0009000003
Tumor
1.3
CPT0079230003
Tumor
1.3
CPT0012080003
Tumor
1.2
CPT0009020003
Normal
1.2
CPT0086890003
Normal
1.1
CPT0064400001
Normal
1.1
CPT0065450001
Normal
1.1
CPT0001230001
Normal
1.1
CPT0024680001
Normal
1.1
CPT0025580004
Tumor
1.1
CPT0086870003
Tumor
1.1
CPT0078990003
Tumor
1.0
CPT0012640003
Normal
1.0
CPT0086370003
Normal
0.9
CPT0025610001
Normal
0.9
CPT0024670003
Tumor
0.9
CPT0088630003
Tumor
0.8
CPT0088900003
Tumor
0.8
CPT0088640003
Normal
0.8
CPT0088970003
Tumor
0.8
CPT0025880003
Tumor
0.8
CPT0077490003
Tumor
0.7
CPT0001220008
Tumor
0.7
CPT0088500001
Normal
0.7
CPT0079000001
Normal
0.7
CPT0081620001
Normal
0.6
CPT0026410003
Tumor
0.6
CPT0082010001
Normal
0.6
CPT0012370003
Tumor
0.6
CPT0077110003
Tumor
0.6
CPT0010120001
Normal
0.6
CPT0089020003
Tumor
0.6
CPT0000870016
Tumor
0.6
CPT0088760003
Tumor
0.6
CPT0011240003
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0017450001
Normal
0.5
CPT0012770003
Normal
0.5
CPT0087050003
Normal
0.5
CPT0006900003
Tumor
0.5
CPT0086360003
Tumor
0.5
CPT0085670003
Tumor
0.5
CPT0014450004
Tumor
0.4
CPT0012090003
Normal
0.4
CPT0077140001
Normal
0.4
CPT0011410003
Tumor
0.4
CPT0007870001
Normal
0.4
CPT0088920001
Normal
0.4
CPT0088780001
Normal
0.4
CPT0023360001
Normal
0.4
CPT0006950001
Normal
0.4
CPT0081600003
Tumor
0.4
CPT0014470001
Normal
0.3
CPT0081990003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0089040001
Normal
0.3
CPT0026420001
Normal
0.3
CPT0087040003
Tumor
0.3
CPT0079430001
Normal
0.3
CPT0064370003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0025290003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0021240003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0066520001
Normal
0.2
CPT0000640003
Tumor
0.2
CPT0069190001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0001180009
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0002270011
Tumor
0.1
CPT0010110003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0078530001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0088690003
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0015730003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0025920001
Normal
-0.3
CPT0065430003
Tumor
-0.3
CPT0078670001
Normal
-0.3
CPT0025350003
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0015810003
Tumor
-0.4
CPT0020020001
Normal
-0.4
CPT0002350011
Tumor
-0.4
CPT0001510001
Normal
-0.4
CPT0092730003
Tumor
-0.4
CPT0066430001
Normal
-0.4
CPT0025230003
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0009080003
Normal
-0.4
CPT0079480003
Tumor
-0.4
CPT0014350001
Normal
-0.4
CPT0069010001
Normal
-0.5
CPT0019160001
Normal
-0.5
CPT0065750003
Tumor
-0.5
CPT0023690003
Tumor
-0.5
CPT0012920003
Normal
-0.5
CPT0063630003
Tumor
-0.5
CPT0012290003
Normal
-0.5
CPT0065810003
Tumor
-0.5
CPT0063330001
Normal
-0.5
CPT0075570001
Normal
-0.5
CPT0010160003
Tumor
-0.6
CPT0066470004
Tumor
-0.6
CPT0006730001
Normal
-0.6
CPT0078940001
Normal
-0.6
CPT0079300001
Normal
-0.6
CPT0078840001
Normal
-0.6
CPT0000790001
Normal
-0.6
CPT0023710001
Normal
-0.6
CPT0001500009
Tumor
-0.6
CPT0018250001
Normal
-0.6
CPT0084560003
Tumor
-0.6
CPT0010170001
Normal
-0.7
CPT0001350001
Normal
-0.7
CPT0086970003
Normal
-0.7
CPT0025060001
Normal
-0.7
CPT0015910003
Tumor
-0.7
CPT0086820003
Tumor
-0.7
CPT0001550001
Normal
-0.7
CPT0092290003
Tumor
-0.7
CPT0012280003
Tumor
-0.8
CPT0025170003
Tumor
-0.8
CPT0075560003
Tumor
-0.8
CPT0012180003
Tumor
-0.8
CPT0092310003
Normal
-0.8
CPT0012900004
Tumor
-0.8
CPT0065820001
Normal
-0.8
CPT0078930003
Tumor
-0.8
CPT0007320003
Tumor
-0.9
CPT0023350003
Tumor
-0.9
CPT0092800003
Normal
-0.9
CPT0020130001
Normal
-0.9
CPT0006530001
Normal
-0.9
CPT0079180003
Tumor
-0.9
CPT0075720003
Tumor
-0.9
CPT0063320003
Tumor
-0.9
CPT0006440003
Tumor
-0.9
CPT0019130003
Tumor
-0.9
CPT0075170001
Normal
-1.0
CPT0069000003
Tumor
-1.0
CPT0088570001
Normal
-1.0
CPT0014370004
Tumor
-1.0
CPT0001540009
Tumor
-1.0
CPT0076350001
Normal
-1.0
CPT0001270001
Normal
-1.0
CPT0069160003
Tumor
-1.0
CPT0086830003
Normal
-1.1
CPT0078660003
Tumor
-1.1
CPT0086030003
Tumor
-1.2
CPT0020120003
Tumor
-1.2
CPT0065930003
Tumor
-1.2
CPT0009060003
Tumor
-1.2
CPT0092790003
Tumor
-1.3
CPT0000660001
Normal
-1.3
CPT0075130003
Tumor
-1.3
CPT0076330003
Tumor
-1.4
CPT0079380003
Tumor
-1.4
CPT0088550004
Tumor
-1.4
CPT0012550003
Tumor
-1.4
CPT0065690003
Tumor
-1.4
CPT0000780007
Tumor
-1.5
CPT0086950003
Tumor
-1.5
CPT0001260009
Tumor
-1.6
CPT0017850003
Tumor
-1.7
CPT0078800003
Tumor
-2.5
CPT0001340003
Tumor
-2.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.