We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
REEP4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
49.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
48.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
38.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
36.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
33.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
31.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
31.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
30.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
28.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
28.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
27.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
26.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
26.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
25.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
24.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
24.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
23.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
23.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
23.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
22.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
20.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
20.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
19.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
18.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
18.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
17.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
17.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
17.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
16.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
16.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
16.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
16.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
14.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
14.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
12.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
11.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
7.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
5.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
4.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
4.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
REEP4 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
45.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
40.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
39.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
28.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
27.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
26.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
25.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
24.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
24.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
21.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
21.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
21.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
21.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
21.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
20.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
20.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
20.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
20.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
20.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
19.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
19.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
18.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
18.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
18.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
18.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
18.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
17.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
17.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
17.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
17.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
17.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
16.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
16.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
16.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
16.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
16.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
15.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
15.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
15.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
15.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
15.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
15.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
15.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
15.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
15.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
15.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
14.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
14.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
14.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
14.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
14.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
14.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
14.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
14.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
13.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
13.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
13.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
13.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
13.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
13.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
13.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
13.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
13.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
13.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
13.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
13.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
13.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
13.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
13.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
13.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
13.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
12.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
12.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
12.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
12.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
12.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
12.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
12.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
12.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
12.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
12.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
12.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
12.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
11.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
11.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
11.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
11.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
11.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
11.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
11.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
11.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
11.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
11.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
11.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
11.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
11.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
11.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
10.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
10.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
10.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
10.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
10.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
10.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
10.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
10.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
10.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
10.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
10.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
10.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
10.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
10.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
10.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
10.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
10.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
10.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
10.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
9.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
9.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
9.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
9.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
9.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
9.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
9.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
9.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
9.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
9.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
9.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
9.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
9.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
9.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
9.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
9.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
9.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
9.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
9.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
9.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
9.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
9.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
9.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
9.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
9.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
9.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
9.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
9.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
9.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
9.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
9.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
9.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
9.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
9.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
9.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
8.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
8.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
8.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
8.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
8.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
8.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
8.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
8.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
8.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
8.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
8.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
8.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
8.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
8.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
8.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
8.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
8.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
8.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
8.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
8.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
8.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
8.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
8.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
8.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
8.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
8.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
8.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
8.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
8.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
8.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
8.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
8.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
8.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
8.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
7.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
7.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
7.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
7.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
7.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
7.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
7.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
7.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
7.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
7.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
7.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
7.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
7.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
7.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
7.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
7.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
7.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
7.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
7.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
7.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
7.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
7.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
7.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
7.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
7.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
7.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
7.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
7.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
7.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
7.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
7.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
7.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
7.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
7.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
7.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
7.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
7.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
7.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
7.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
7.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
7.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
7.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
6.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
6.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
6.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
6.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
6.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
6.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
6.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
6.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
6.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
6.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
6.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
6.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
6.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
6.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
6.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
6.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
6.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
6.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
6.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
6.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
6.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
6.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
6.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
6.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
6.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
6.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
6.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
5.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
5.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
5.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
5.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
5.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
5.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
5.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
5.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
5.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
5.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
5.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
5.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
5.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
5.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
5.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
5.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
5.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
5.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
5.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
5.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
4.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
4.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
4.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
4.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
4.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
4.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
4.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
4.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
3.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
2.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
2.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
REEP4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
30.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
29.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
25.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
23.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
23.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
22.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
20.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
20.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
20.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
19.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
18.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
18.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
17.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
17.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
17.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
16.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
16.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
15.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
15.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
15.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
14.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
14.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
13.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
13.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
13.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
13.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
13.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
13.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
12.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
12.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
12.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
12.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
12.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
12.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
12.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
11.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
11.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
11.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
11.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
11.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
10.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
10.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
9.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
9.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
9.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
9.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
9.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
9.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
9.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
9.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
9.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
9.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
8.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
8.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
8.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
8.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
8.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
8.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
7.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
7.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
7.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
7.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
6.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
6.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
6.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
5.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
5.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
5.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
REEP4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
66.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
44.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
43.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
41.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
40.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
38.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
37.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
34.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
33.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
30.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
27.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
26.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
26.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
26.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
26.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
25.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
24.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
23.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
23.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
23.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
22.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
22.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
22.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
22.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
22.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
22.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
22.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
22.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
22.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
22.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
22.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
22.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
21.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
21.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
21.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
21.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
20.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
20.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
20.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
20.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
20.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
20.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
20.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
20.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
20.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
20.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
19.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
19.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
19.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
19.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
19.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
19.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
19.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
18.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
18.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
18.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
18.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
18.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
18.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
18.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
17.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
17.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
17.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
17.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
17.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
17.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
17.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
17.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
17.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
16.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
16.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
16.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
16.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
16.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
16.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
16.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
15.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
15.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
15.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
15.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
15.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
15.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
15.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
15.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
15.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
15.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
15.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
15.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
15.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
14.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
14.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
14.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
14.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
14.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
14.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
13.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
13.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
13.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
13.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
13.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
13.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
13.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
13.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
13.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
13.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
13.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
12.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
12.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
12.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
12.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
12.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
12.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
12.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
12.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
11.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
11.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
11.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
11.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
11.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
11.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
11.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
11.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
11.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
11.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
11.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
11.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
11.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
10.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
10.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
10.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
10.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
10.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
10.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
10.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
10.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
10.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
9.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
9.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
9.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
9.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
9.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
9.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
9.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
9.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
9.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
9.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
8.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
8.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
8.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
8.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
8.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
8.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
8.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
7.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
7.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
7.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
7.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
6.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
5.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
5.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
5.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
5.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
5.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
4.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
3.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
3.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0092290003
Tumor
1.2
CPT0081880003
Tumor
1.1
CPT0078800003
Tumor
1.0
CPT0025290003
Tumor
0.9
CPT0019130003
Tumor
0.8
CPT0012180003
Tumor
0.8
CPT0079180003
Tumor
0.8
CPT0078510003
Tumor
0.8
CPT0014160003
Tumor
0.8
CPT0017850003
Tumor
0.7
CPT0075130003
Tumor
0.7
CPT0089460004
Tumor
0.7
CPT0078990003
Tumor
0.7
CPT0001340003
Tumor
0.7
CPT0092730003
Tumor
0.7
CPT0002350011
Tumor
0.7
CPT0069000003
Tumor
0.7
CPT0079380003
Tumor
0.6
CPT0078930003
Tumor
0.6
CPT0002270011
Tumor
0.6
CPT0025110003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0012670003
Tumor
0.5
CPT0075560003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0023690003
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0065690003
Tumor
0.5
CPT0015910003
Tumor
0.5
CPT0087040003
Tumor
0.4
CPT0087050003
Normal
0.4
CPT0086030003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0088900003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0065810003
Tumor
0.4
CPT0089020003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0025580004
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0088760003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0086870003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0075170001
Normal
N/A
CPT0088630003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0014450004
Tumor
0.0
CPT0069190001
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0078840001
Normal
-0.2
CPT0001220008
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0069010001
Normal
-0.3
CPT0000890001
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0085670003
Tumor
-0.3
CPT0012550003
Tumor
-0.3
CPT0088640003
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0024670003
Tumor
-0.3
CPT0079430001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0088500001
Normal
-0.4
CPT0063640001
Normal
-0.4
CPT0013790003
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0025610001
Normal
-0.4
CPT0089040001
Normal
-0.4
CPT0012640003
Normal
-0.4
CPT0078530001
Normal
-0.4
CPT0079510001
Normal
-0.5
CPT0078940001
Normal
-0.5
CPT0078670001
Normal
-0.5
CPT0075570001
Normal
-0.5
CPT0076350001
Normal
-0.5
CPT0092740003
Normal
-0.5
CPT0025920001
Normal
-0.5
CPT0000640003
Tumor
-0.6
CPT0092310003
Normal
-0.6
CPT0020130001
Normal
-0.6
CPT0088920001
Normal
-0.6
CPT0079300001
Normal
-0.6
CPT0086830003
Normal
-0.6
CPT0014350001
Normal
-0.6
CPT0018250001
Normal
-0.6
CPT0012090003
Normal
-0.7
CPT0065930003
Tumor
-0.7
CPT0079000001
Normal
-0.7
CPT0014470001
Normal
-0.7
CPT0000660001
Normal
-0.7
CPT0071150004
Tumor
-0.8
CPT0089480003
Normal
-0.8
CPT0081990003
Tumor
-0.8
CPT0088570001
Normal
-0.8
CPT0011240003
Tumor
-0.8
CPT0012570003
Normal
-0.9
CPT0082010001
Normal
-0.9
CPT0012770003
Normal
-1.0
CPT0024680001
Normal
-1.0
CPT0025060001
Normal
-1.1
CPT0014130001
Normal
-1.3
CPT0026410003
Tumor
N/A
CPT0000790001
Normal
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0006440003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0009020003
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0026420001
Normal
N/A
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
