HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:76.2 nTPM
HPA Brain:97.3 nTPM
GTEx:76.2 nTPM
FANTOM5:121.8 Scaled Tags Per Million
Pig:113.3 nTPM
Mouse:140.8 nTPM
Allen mouse:21.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039291Antibody HPA044062Antibody CAB017448
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 97.3
Sample id Sample description nTPM
Hippocampus
nTPM: 87.3
2529 Female, age 94, left hemisphere 107.4
1898 Male, age 80, left hemisphere 93.5
2621 Female, age 67, right hemisphere 91.6
1855 Male, age 76, left hemisphere 83.6
2148 Female, age 91, left hemisphere 76.7
1911 Female, age 85, right hemisphere 71.1
Dentate gyrus
nTPM: 89.0
2010 Male, age 76, both hemispheres 107.2
2530 Female, age 94, left hemisphere 96.2
1927 Female, age 91, both hemispheres 86.5
2528 Male, age 74, both hemispheres 86.3
2246 Female, age 85, both hemispheres 81.9
2531 Female, age 67, both hemispheres 76.0
Entorhinal gyrus
nTPM: 77.0
1787 Male, age 76, left hemisphere 87.3
1938 Female, age 85, left hemisphere 84.6
2764 Male, age 80, right hemisphere 83.7
2117 Female, age 91, right hemisphere 77.5
2686 Male, age 75, right hemisphere 67.7
2613 Female, age 94, left hemisphere 61.2
Hippocampus, CA1
nTPM: 97.3
2045 Male, age 76, both hemispheres 120.2
2749 Male, age 80, left hemisphere 112.4
1873 Female, age 85, both hemispheres 96.3
2527 Male, age 74, both hemispheres 83.0
2082 Female, age 91, right hemisphere 74.9
Hippocampus, CA2
nTPM: 86.7
1892 Male, age 76, both hemispheres 112.6
1963 Male, age 80, left hemisphere 90.5
2249 Male, age 74, both hemispheres 89.5
2437 Female, age 94, left hemisphere 84.6
2113 Female, age 91, right hemisphere 74.3
1940 Female, age 85, left hemisphere 68.7
Hippocampus, CA3
nTPM: 87.1
1867 Male, age 76, both hemispheres 108.1
2620 Female, age 94, left hemisphere 92.7
2436 Male, age 74, both hemispheres 91.6
2137 Male, age 80, left hemisphere 84.2
1891 Female, age 85, both hemispheres 78.9
2861 Female, age 67, both hemispheres 67.3
Parahippocampal cortex
nTPM: 83.2
2018 Male, age 76, both hemispheres 98.6
2250 Female, age 67, right hemisphere 97.7
1933 Female, age 85, both hemispheres 90.3
2245 Female, age 91, both hemispheres 89.4
1850 Male, age 80, both hemispheres 85.8
2532 Female, age 72, left hemisphere 83.7
1990 Female, age 91, right hemisphere 83.5
2692 Male, age 74, both hemispheres 76.3
2622 Female, age 67, right hemisphere 63.7
2693 Female, age 94, both hemispheres 62.6
Perirhinal gyrus
nTPM: 83.3
1847 Female, age 91, left hemisphere 96.0
2848 Male, age 76, right hemisphere 87.4
1841 Female, age 85, right hemisphere 85.6
1794 Male, age 80, right hemisphere 76.3
2521 Female, age 94, right hemisphere 71.2
Subiculum
nTPM: 88.6
2042 Male, age 76, both hemispheres 101.0
2438 Female, age 94, left hemisphere 100.4
1901 Male, age 80, both hemispheres 90.8
1977 Female, age 85, both hemispheres 88.9
2619 Male, age 74, both hemispheres 81.5
2729 Female, age 91, right hemisphere 68.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 76.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.2
Samples: 197

Max nTPM: 537.0
Min nTPM: 33.1
Std nTPM: 50.4
Median nTPM: 66.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 537.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 382.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 288.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 222.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 218.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 217.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 190.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 147.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 141.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 115.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 114.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 121.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 121.8
FF:10153-102I9 76 years, female 144.9
FF:10169-103B7 60 years, female 98.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 113.3
Pig sample Sample description nTPM
Subiculum
nTPM: 97.1
Samples: 4

Max nTPM: 131.3
Min nTPM: 79.3
Sample A Female 131.3
Sample B Female 85.2
Sample C Male 79.3
Sample D Male 92.7
Dorsal hippocampus
nTPM: 113.3
Samples: 4

Max nTPM: 149.5
Min nTPM: 94.4
Sample A Female 149.5
Sample B Female 105.2
Sample C Male 104.2
Sample D Male 94.4
Entorhinal cortex
nTPM: 101.1
Samples: 4

Max nTPM: 119.9
Min nTPM: 83.1
Sample A Female 119.9
Sample B Female 111.1
Sample C Male 90.4
Sample D Male 83.1
Ventral hippocampus
nTPM: 101.4
Samples: 4

Max nTPM: 115.3
Min nTPM: 70.0
Sample A Female 115.3
Sample B Female 70.0
Sample C Male 112.3
Sample D Male 108.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 140.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 138.5
Samples: 4

Max nTPM: 147.0
Min nTPM: 124.5
Sample A Male 124.5
Sample B Male 143.3
Sample C Female 147.0
Sample D Female 139.1
Hippocampal formation
nTPM: 140.8
Samples: 4

Max nTPM: 147.6
Min nTPM: 130.5
Sample A Male 147.6
Sample B Male 130.5
Sample C Female 142.2
Sample D Female 143.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 21.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.9
413807 Antisense, RP_040809_01_F06, Mouse strain C57BL/6J (56 days, male) 21.9

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