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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
75.6
nTPM
HPA Brain:
86.2
nTPM
GTEx:
75.6
nTPM
FANTOM5:
137.2
Scaled Tags Per Million
Pig:
73.7
nTPM
Mouse:
139.3
nTPM
Allen mouse:
18.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
86.2
Sample id
Sample description
nTPM
Amygdala nTPM: 86.2
2814
Male, age 76, right hemisphere
95.0
2517
Female, age 94, left hemisphere
86.7
1987
Female, age 91, left hemisphere
85.1
2695
Female, age 67, right hemisphere
83.3
2514
Male, age 75, right hemisphere
81.1
Basal amygdala nTPM: 74.8
2110
Male, age 80, left hemisphere
85.4
2609
Male, age 75, right hemisphere
81.5
2685
Female, age 94, left hemisphere
78.4
2243
Female, age 91, right hemisphere
76.5
1955
Male, age 76, both hemispheres
72.1
2827
Female, age 67, right hemisphere
55.1
Central amygdala nTPM: 80.8
2239
Male, age 80, left hemisphere
86.7
2701
Female, age 91, right hemisphere
81.7
2826
Female, age 94, left hemisphere
81.5
2515
Male, age 75, right hemisphere
77.3
1905
Male, age 76, both hemispheres
76.8
Corticomedial amygdala nTPM: 73.8
2829
Male, age 80, left hemisphere
82.5
2240
Male, age 76, both hemispheres
76.2
2242
Female, age 91, right hemisphere
75.1
2429
Female, age 94, left hemisphere
75.0
2428
Male, age 75, right hemisphere
73.1
2535
Female, age 67, right hemisphere
60.6
Lateral amygdala nTPM: 74.8
1883
Male, age 76, both hemispheres
86.5
2516
Male, age 75, right hemisphere
83.0
2534
Female, age 94, left hemisphere
79.1
2255
Female, age 91, right hemisphere
71.0
2256
Male, age 80, left hemisphere
70.9
2830
Female, age 67, right hemisphere
58.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
75.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 75.6
Samples: 152
Max nTPM: 493.6
Min nTPM: 34.2
Std nTPM: 55.4
Median nTPM: 62.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
493.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
333.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
322.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
250.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
243.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
230.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
150.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
149.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
141.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
140.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
135.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
121.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
118.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
114.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
112.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
105.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
102.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
89.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
89.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
87.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
86.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
86.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
84.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
84.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
83.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
83.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
82.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
81.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
80.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
79.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
78.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
77.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
77.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
77.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
76.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
76.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
75.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
75.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
74.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
74.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
74.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
74.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
74.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
73.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
72.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
72.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
71.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
71.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
70.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
69.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
69.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
68.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
68.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
68.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
67.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
67.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
67.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
67.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
67.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
67.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
66.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
66.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
66.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
65.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
65.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
65.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
64.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
64.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
64.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
64.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
64.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
64.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
62.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
62.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
62.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
62.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
62.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
61.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
61.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
61.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
61.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
61.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
60.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
60.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
60.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
60.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
60.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
60.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
59.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
59.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
59.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
59.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
58.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
58.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
58.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
58.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
57.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
56.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
56.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
56.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
55.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
55.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
55.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
55.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
55.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
54.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
54.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
54.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
53.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
53.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
53.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
53.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
53.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
52.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
52.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
51.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
51.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
51.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
51.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
51.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
50.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
50.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
50.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
49.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
49.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
49.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
49.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
48.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
48.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
48.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
47.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
47.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
47.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
46.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
46.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
45.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
45.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
45.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
45.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
44.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
42.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
41.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
41.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
41.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
41.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
38.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
37.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
37.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
36.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
35.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
34.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
34.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
139.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 139.3
Samples: 4
Max nTPM: 144.2
Min nTPM: 131.4
Sample A
Male
144.2
Sample B
Male
143.2
Sample C
Female
131.4
Sample D
Female
138.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.