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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
54.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
47.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
38.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
38.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
37.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
35.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
35.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
35.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
34.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
32.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
32.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
27.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
27.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
27.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
25.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
24.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
23.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
22.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
22.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
20.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
20.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
20.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
19.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
19.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
19.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
17.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
16.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
16.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
16.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
15.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
15.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
14.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
13.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
12.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
12.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
10.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
9.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
9.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
8.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
8.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
6.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
5.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
4.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
58.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
263.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
189.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
188.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
184.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
183.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
181.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
179.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
175.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
167.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
166.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
160.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
160.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
158.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
158.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
157.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
157.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
154.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
152.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
150.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
146.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
145.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
144.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
143.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
143.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
142.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
140.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
139.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
139.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
138.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
137.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
135.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
133.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
133.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
132.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
131.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
130.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
128.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
127.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
126.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
124.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
120.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
113.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
112.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
112.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
112.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
110.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
110.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
109.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
109.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
108.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
108.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
105.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
104.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
104.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
104.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
102.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
101.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
100.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
98.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
98.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
97.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
96.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
96.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
96.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
94.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
94.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
93.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
92.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
90.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
90.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
89.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
89.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
89.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
88.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
88.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
88.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
87.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
87.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
87.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
87.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
86.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
85.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
85.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
85.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
85.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
85.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
84.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
84.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
84.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
84.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
83.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
83.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
83.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
83.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
83.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
82.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
82.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
81.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
81.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
81.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
81.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
80.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
80.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
80.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
80.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
80.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
79.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
79.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
79.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
79.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
78.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
78.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
78.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
78.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
77.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
77.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
77.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
77.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
77.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
76.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
75.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
74.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
74.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
74.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
73.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
73.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
73.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
73.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
73.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
72.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
72.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
72.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
71.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
71.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
71.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
71.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
70.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
70.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
69.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
69.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
69.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
69.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
69.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
68.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
68.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
68.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
68.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
68.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
67.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
67.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
66.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
66.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
66.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
66.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
65.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
65.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
65.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
65.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
65.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
64.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
64.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
64.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
64.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
64.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
63.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
63.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
63.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
63.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
63.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
63.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
63.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
62.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
62.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
62.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
62.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
62.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
61.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
61.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
60.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
60.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
60.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
60.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
60.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
60.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
60.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
60.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
60.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
60.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
60.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
60.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
59.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
59.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
59.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
59.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
59.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
59.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
58.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
58.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
58.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
58.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
58.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
57.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
57.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
57.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
57.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
57.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
56.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
56.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
56.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
56.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
55.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
55.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
55.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
55.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
55.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
55.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
55.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
55.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
55.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
54.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
54.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
54.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
54.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
54.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
54.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
54.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
54.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
54.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
54.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
54.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
54.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
54.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
54.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
53.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
53.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
53.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
52.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
52.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
52.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
52.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
52.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
52.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
52.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
51.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
51.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
51.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
51.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
51.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
51.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
51.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
50.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
50.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
50.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
50.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
50.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
50.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
50.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
50.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
49.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
49.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
49.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
49.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
48.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
48.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
48.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
48.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
48.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
48.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
48.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
48.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
48.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
48.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
47.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
47.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
47.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
47.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
47.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
47.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
47.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
47.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
47.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
47.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
47.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
47.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
47.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
47.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
47.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
47.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
46.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
46.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
46.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
46.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
46.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
45.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
45.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
45.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
44.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
44.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
44.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
44.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
44.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
44.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
44.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
44.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
43.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
43.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
43.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
43.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
43.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
43.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
43.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
42.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
42.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
42.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
42.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
42.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
42.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
42.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
41.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
41.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
41.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
41.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
41.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
41.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
41.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
40.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
40.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
40.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
40.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
40.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
40.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
40.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
40.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
40.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
40.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
39.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
39.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
39.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
39.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
39.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
39.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
39.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
39.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
39.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
39.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
38.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
38.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
38.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
38.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
38.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
38.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
38.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
38.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
38.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
38.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
38.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
37.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
37.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
37.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
37.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
37.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
37.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
37.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
37.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
37.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
36.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
36.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
36.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
36.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
36.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
36.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
36.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
36.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
36.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
36.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
36.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
36.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
36.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
36.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
35.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
35.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
35.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
35.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
35.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
35.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
35.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
35.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
35.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
35.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
35.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
35.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
34.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
34.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
34.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
34.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
34.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
33.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
33.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
33.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
33.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
33.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
33.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
33.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
33.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
33.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
32.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
32.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
32.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
32.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
32.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
32.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
31.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
31.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
31.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
31.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
31.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
31.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
31.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
31.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
30.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
30.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
30.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
30.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
30.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
30.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
29.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
29.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
29.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
29.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
29.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
28.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
28.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
28.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
28.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
28.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
28.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
28.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
28.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
28.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
28.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
27.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
27.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
27.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
27.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
27.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
27.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
27.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
27.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
26.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
26.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
26.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
26.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
26.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
26.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
26.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
25.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
25.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
25.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
25.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
25.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
25.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
25.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
25.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
24.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
24.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
24.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
24.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
24.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
24.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
24.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
24.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
24.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
23.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
23.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
23.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
23.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
23.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
23.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
23.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
23.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
23.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
22.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
22.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
22.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
22.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
21.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
21.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
21.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
21.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
21.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
21.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
21.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
20.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
19.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
19.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
19.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
18.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
18.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
17.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
16.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
15.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
15.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
14.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
14.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
13.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
8.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
74.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
360.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
230.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
218.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
196.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
183.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
158.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
142.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
141.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
140.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
138.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
131.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
130.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
126.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
126.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
121.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
119.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
117.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
109.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
108.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
106.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
103.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
103.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
102.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
100.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
100.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
98.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
95.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
94.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
93.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
92.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
91.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
89.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
89.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
87.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
87.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
84.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
81.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
77.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
76.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
72.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
69.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
67.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
67.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
66.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
64.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
62.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
61.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
61.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
60.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
59.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
59.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
58.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
56.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
54.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
54.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
54.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
53.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
52.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
50.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
49.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
47.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
46.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
46.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
45.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
44.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
43.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
43.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
41.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
41.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
41.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
40.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
38.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
37.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
36.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
35.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
33.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
32.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
30.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
30.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
30.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
29.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
29.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
29.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
29.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
29.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
28.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
28.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
26.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
25.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
24.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
23.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
21.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
17.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
315.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
174.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
170.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
128.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
122.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
118.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
113.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
111.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
104.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
100.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
100.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
99.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
88.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
86.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
85.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
80.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
78.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
77.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
76.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
74.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
73.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
72.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
71.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
70.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
70.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
69.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
69.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
69.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
66.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
65.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
64.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
64.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
62.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
62.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
61.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
60.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
59.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
59.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
59.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
59.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
59.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
58.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
58.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
58.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
57.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
57.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
56.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
56.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
56.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
56.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
55.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
55.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
55.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
54.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
53.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
52.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
52.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
52.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
51.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
51.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
51.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
51.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
51.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
51.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
50.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
50.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
50.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
50.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
49.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
49.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
49.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
48.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
48.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
48.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
48.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
48.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
48.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
48.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
48.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
48.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
48.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
47.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
47.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
47.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
47.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
47.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
47.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
46.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
46.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
46.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
46.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
46.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
46.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
46.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
45.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
45.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
45.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
45.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
44.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
44.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
44.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
44.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
44.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
43.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
43.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
43.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
43.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
43.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
42.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
42.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
42.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
42.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
42.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
42.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
42.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
41.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
41.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
41.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
41.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
41.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
41.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
41.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
40.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
40.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
40.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
40.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
39.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
39.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
39.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
39.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
38.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
38.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
38.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
38.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
38.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
37.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
37.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
37.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
37.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
37.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
37.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
36.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
36.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
36.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
36.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
36.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
36.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
36.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
36.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
36.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
35.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
35.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
35.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
34.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
34.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
34.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
34.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
34.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
34.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
34.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
33.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
33.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
33.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
33.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
33.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
32.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
32.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
32.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
32.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
32.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
32.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
32.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
32.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
31.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
31.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
31.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
31.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
31.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
31.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
31.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
31.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
31.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
31.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
31.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
30.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
30.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
30.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
30.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
29.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
29.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
29.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
29.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
29.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
29.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
28.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
28.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
28.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
28.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
27.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
27.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
27.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
27.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
27.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
27.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
27.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
27.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
26.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
26.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
26.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
26.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
26.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
26.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
26.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
26.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
26.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
25.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
25.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
25.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
25.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
25.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
25.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
24.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
24.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
24.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
24.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
23.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
23.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
23.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
23.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
23.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
23.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
23.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
23.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
23.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
22.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
22.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
22.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
22.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
21.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
20.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
19.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
19.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
19.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
18.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
17.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
17.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
15.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
15.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
14.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
14.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
13.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
12.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
11.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
10.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
8.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
8.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
8.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
7.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
6.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
1.9
CPT0015730003
Tumor
1.9
CPT0078990003
Tumor
1.7
CPT0092160003
Tumor
1.6
CPT0086360003
Tumor
1.5
CPT0020120003
Tumor
1.4
CPT0025110003
Tumor
1.4
CPT0010110003
Tumor
1.3
CPT0079380003
Tumor
1.3
CPT0007320003
Tumor
1.2
CPT0075130003
Tumor
1.2
CPT0001260009
Tumor
1.2
CPT0065810003
Tumor
1.2
CPT0012280003
Tumor
1.2
CPT0064370003
Tumor
1.1
CPT0079270003
Tumor
1.1
CPT0087040003
Tumor
0.9
CPT0065430003
Tumor
0.9
CPT0002350011
Tumor
0.9
CPT0023350003
Tumor
0.9
CPT0023690003
Tumor
0.9
CPT0025290003
Tumor
0.7
CPT0006900003
Tumor
0.7
CPT0081880003
Tumor
0.7
CPT0092730003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0025880003
Tumor
0.6
CPT0078930003
Tumor
0.6
CPT0001500009
Tumor
0.6
CPT0026410003
Tumor
0.6
CPT0001220008
Tumor
0.6
CPT0025050003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0012670003
Tumor
0.5
CPT0086870003
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0065870003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0000870016
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0015910003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0024670003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0065690003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0019990003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0009060003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0000640003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0081600003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0012080003
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0017850003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0011410003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0075720003
Tumor
-0.3
CPT0000780007
Tumor
-0.4
CPT0077490003
Tumor
-0.4
CPT0081990003
Tumor
-0.5
CPT0010160003
Tumor
-0.5
CPT0086950003
Tumor
-0.5
CPT0065930003
Tumor
-0.5
CPT0078660003
Tumor
-0.5
CPT0014450004
Tumor
-0.5
CPT0077320001
Normal
-0.6
CPT0065820001
Normal
-0.6
CPT0088570001
Normal
-0.7
CPT0078530001
Normal
-0.7
CPT0066520001
Normal
-0.7
CPT0092800003
Normal
-0.7
CPT0084560003
Tumor
-0.7
CPT0075170001
Normal
-0.7
CPT0001510001
Normal
-0.7
CPT0084590001
Normal
-0.7
CPT0001190001
Normal
-0.8
CPT0086370003
Normal
-0.8
CPT0089040001
Normal
-0.8
CPT0088710001
Normal
-0.8
CPT0023360001
Normal
-0.8
CPT0006530001
Normal
-0.9
CPT0079430001
Normal
-0.9
CPT0012290003
Normal
-0.9
CPT0081620001
Normal
-0.9
CPT0078670001
Normal
-0.9
CPT0000890001
Normal
-0.9
CPT0001350001
Normal
-0.9
CPT0065450001
Normal
-0.9
CPT0069190001
Normal
-0.9
CPT0088640003
Normal
-0.9
CPT0001550001
Normal
-0.9
CPT0088970003
Tumor
-0.9
CPT0088500001
Normal
-0.9
CPT0092310003
Normal
-0.9
CPT0089480003
Normal
-0.9
CPT0010120001
Normal
-0.9
CPT0075570001
Normal
-0.9
CPT0078840001
Normal
-0.9
CPT0006950001
Normal
-1.0
CPT0087050003
Normal
-1.0
CPT0092740003
Normal
-1.0
CPT0086830003
Normal
-1.0
CPT0088920001
Normal
-1.0
CPT0014470001
Normal
-1.0
CPT0001270001
Normal
-1.0
CPT0000790001
Normal
-1.0
CPT0014350001
Normal
-1.0
CPT0086970003
Normal
-1.0
CPT0079510001
Normal
-1.0
CPT0025610001
Normal
-1.0
CPT0063640001
Normal
-1.1
CPT0012900004
Tumor
-1.1
CPT0066430001
Normal
-1.1
CPT0018250001
Normal
-1.1
CPT0019160001
Normal
-1.1
CPT0000660001
Normal
-1.1
CPT0010170001
Normal
-1.1
CPT0017450001
Normal
-1.1
CPT0078940001
Normal
-1.1
CPT0026420001
Normal
-1.1
CPT0012090003
Normal
-1.1
CPT0082010001
Normal
-1.1
CPT0023710001
Normal
-1.1
CPT0064400001
Normal
-1.1
CPT0001230001
Normal
-1.1
CPT0079300001
Normal
-1.1
CPT0088780001
Normal
-1.2
CPT0076350001
Normal
-1.2
CPT0007470001
Normal
-1.2
CPT0002370001
Normal
-1.2
CPT0079000001
Normal
-1.2
CPT0077500001
Normal
-1.2
CPT0069010001
Normal
-1.2
CPT0014130001
Normal
-1.2
CPT0020020001
Normal
-1.2
CPT0025920001
Normal
-1.2
CPT0025060001
Normal
-1.2
CPT0011240003
Tumor
-1.3
CPT0013790003
Normal
-1.3
CPT0086890003
Normal
-1.3
CPT0063330001
Normal
-1.3
CPT0012640003
Normal
-1.3
CPT0079180003
Tumor
-1.3
CPT0077140001
Normal
-1.3
CPT0020130001
Normal
-1.4
CPT0006730001
Normal
-1.4
CPT0009020003
Normal
-1.5
CPT0017410003
Tumor
-1.6
CPT0024680001
Normal
-1.6
CPT0012920003
Normal
-1.6
CPT0007870001
Normal
-1.7
CPT0012570003
Normal
-1.8
CPT0009080003
Normal
-1.9
CPT0012770003
Normal
-1.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
