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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NT5DC2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
298.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
175.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
87.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
30.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
29.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
28.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
28.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
27.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
21.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
18.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
17.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
16.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
16.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
15.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
13.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
11.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
10.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
9.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
9.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
8.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
6.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
6.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
5.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
5.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
5.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
4.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
3.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
3.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
2.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
1.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NT5DC2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
153.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
143.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
73.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
67.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
66.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
64.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
63.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
60.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
60.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
58.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
56.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
53.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
52.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
51.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
50.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
46.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
45.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
45.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
44.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
43.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
43.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
41.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
40.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
39.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
39.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
39.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
39.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
38.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
38.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
38.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
38.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
38.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
38.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
37.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
37.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
37.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
36.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
36.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
36.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
36.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
36.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
36.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
36.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
35.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
35.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
35.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
35.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
35.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
34.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
34.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
34.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
34.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
34.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
33.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
33.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
33.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
32.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
32.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
31.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
31.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
31.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
31.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
31.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
30.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
30.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
30.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
30.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
30.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
30.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
30.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
30.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
30.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
30.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
30.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
29.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
29.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
29.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
29.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
29.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
29.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
28.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
28.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
28.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
28.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
28.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
28.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
28.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
28.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
27.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
27.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
27.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
27.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
27.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
27.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
27.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
26.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
26.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
26.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
26.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
26.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
26.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
26.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
26.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
25.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
25.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
25.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
25.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
25.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
25.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
25.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
25.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
25.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
24.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
24.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
24.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
24.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
24.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
24.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
24.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
24.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
24.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
24.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
24.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
24.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
24.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
24.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
24.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
24.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
24.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
24.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
23.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
23.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
23.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
23.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
23.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
23.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
23.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
23.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
23.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
23.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
23.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
23.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
23.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
23.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
23.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
23.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
23.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
23.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
22.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
22.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
22.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
22.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
22.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
22.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
21.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
21.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
21.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
21.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
21.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
21.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
21.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
21.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
21.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
21.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
21.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
20.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
20.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
20.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
20.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
20.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
20.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
20.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
20.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
20.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
20.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
20.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
20.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
20.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
20.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
20.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
20.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
19.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
19.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
19.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
19.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
19.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
19.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
19.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
19.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
19.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
19.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
19.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
19.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
18.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
18.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
18.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
18.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
18.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
18.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
18.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
18.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
18.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
18.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
18.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
18.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
17.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
17.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
17.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
17.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
17.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
17.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
17.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
17.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
17.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
17.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
17.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
16.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
16.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
16.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
16.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
16.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
16.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
16.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
16.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
16.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
16.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
16.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
16.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
16.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
15.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
15.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
15.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
15.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
15.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
15.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
15.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
15.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
15.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
15.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
15.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
15.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
14.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
14.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
14.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
14.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
14.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
14.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
14.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
14.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
14.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
13.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
13.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
13.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
13.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
13.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
13.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
13.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
13.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
12.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
12.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
12.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
12.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
12.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
12.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
12.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
12.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
12.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
12.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
11.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
11.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
11.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
11.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
11.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
11.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
11.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
10.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
10.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
10.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
10.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
10.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
10.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
10.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
9.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
9.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
9.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
9.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
9.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
9.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
9.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
9.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
9.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
9.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
8.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
8.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
8.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
8.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
8.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
8.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
8.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
8.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
8.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
8.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
8.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
8.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
8.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
7.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
7.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
7.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
7.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
7.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
7.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
7.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
7.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
7.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
6.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
6.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
6.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
6.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
6.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
6.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
6.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
6.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
6.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
6.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
5.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
5.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
5.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
5.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
4.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
3.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
2.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
2.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NT5DC2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
57.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
51.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
39.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
38.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
35.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
30.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
26.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
23.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
22.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
21.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
21.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
21.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
21.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
20.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
20.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
20.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
20.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
19.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
19.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
18.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
17.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
16.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
16.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
16.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
14.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
14.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
13.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
13.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
13.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
13.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
12.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
12.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
12.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
11.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
11.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
11.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
11.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
10.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
10.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
10.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
10.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
9.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
9.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
9.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
9.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
8.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
8.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
8.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
8.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
8.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
8.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
7.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
7.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
7.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
7.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
6.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
6.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
6.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
6.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
5.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
5.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
5.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
5.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
5.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
4.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
4.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
4.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NT5DC2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
98.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
96.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
81.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
80.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
78.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
74.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
68.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
61.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
59.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
59.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
57.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
57.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
56.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
55.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
54.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
54.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
54.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
52.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
52.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
51.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
49.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
48.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
48.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
47.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
45.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
44.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
43.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
43.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
43.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
42.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
42.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
41.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
41.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
41.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
40.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
40.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
39.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
38.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
38.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
38.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
37.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
37.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
37.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
36.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
35.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
34.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
34.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
34.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
34.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
34.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
33.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
33.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
33.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
32.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
32.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
32.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
32.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
32.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
32.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
32.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
32.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
32.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
31.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
31.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
31.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
30.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
30.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
30.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
30.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
29.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
29.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
29.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
28.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
28.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
28.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
28.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
28.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
28.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
28.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
27.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
27.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
26.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
26.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
26.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
26.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
26.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
26.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
26.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
26.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
26.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
26.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
26.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
25.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
25.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
25.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
24.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
24.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
24.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
24.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
24.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
24.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
23.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
23.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
23.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
23.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
23.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
23.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
23.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
22.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
22.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
22.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
22.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
22.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
22.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
21.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
21.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
21.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
21.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
21.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
21.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
21.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
21.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
20.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
20.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
20.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
20.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
20.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
20.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
20.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
20.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
20.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
20.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
19.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
19.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
19.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
19.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
19.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
19.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
19.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
18.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
18.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
18.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
18.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
18.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
18.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
18.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
18.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
17.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
17.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
17.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
17.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
17.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
17.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
17.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
17.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
16.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
16.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
16.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
16.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
16.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
16.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
16.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
16.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
16.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
16.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
15.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
15.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
15.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
15.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
15.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
15.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
15.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
15.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
14.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
14.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
14.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
14.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
13.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
13.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
13.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
13.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
13.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
13.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
13.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
13.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
13.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
13.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
12.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
12.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
12.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
11.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
11.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
11.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
11.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
11.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
10.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
10.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
10.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
10.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
9.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
9.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
9.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
8.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
8.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
7.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
7.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
5.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
5.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
5.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
4.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
3.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
3.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
2.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
2.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
2.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
1.0
CPT0088630003
Tumor
0.8
CPT0066470004
Tumor
0.8
CPT0084560003
Tumor
0.8
CPT0012670003
Tumor
0.7
CPT0065930003
Tumor
0.6
CPT0076350001
Normal
0.6
CPT0012640003
Normal
0.6
CPT0092290003
Tumor
0.6
CPT0092790003
Tumor
0.6
CPT0089460004
Tumor
0.5
CPT0088760003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0065690003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0079430001
Normal
0.4
CPT0086870003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0088500001
Normal
0.4
CPT0012570003
Normal
0.4
CPT0011410003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0012770003
Normal
0.4
CPT0069190001
Normal
0.3
CPT0077310003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0069010001
Normal
0.3
CPT0088480003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0088780001
Normal
0.3
CPT0065750003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0001190001
Normal
0.3
CPT0000780007
Tumor
0.3
CPT0063630003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0086830003
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0020130001
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0019990003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0012180003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0081880003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0025920001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0020020001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0092190003
Normal
0.0
CPT0082010001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0086360003
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0012900004
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0009080003
Normal
-0.1
CPT0089040001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0007320003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0001220008
Tumor
-0.2
CPT0088710001
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0009060003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0078800003
Tumor
-0.2
CPT0078530001
Normal
-0.3
CPT0012280003
Tumor
-0.3
CPT0013790003
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0001540009
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0065430003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0079380003
Tumor
-0.3
CPT0014350001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0014450004
Tumor
-0.4
CPT0088570001
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0020120003
Tumor
-0.4
CPT0023360001
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0079270003
Tumor
-0.5
CPT0002350011
Tumor
-0.5
CPT0025050003
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0017410003
Tumor
-0.5
CPT0024670003
Tumor
-0.6
CPT0012550003
Tumor
-0.6
CPT0000640003
Tumor
-0.7
CPT0023350003
Tumor
-0.7
CPT0092160003
Tumor
-0.7
CPT0078660003
Tumor
-0.7
CPT0075570001
Normal
-0.8
CPT0001180009
Tumor
-0.8
CPT0023710001
Normal
-0.9
CPT0079180003
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
