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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LMBRD1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
36.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
34.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
28.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
18.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
18.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
11.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
9.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
9.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
8.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
8.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
8.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
6.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
6.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
5.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
5.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
4.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
4.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
3.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
3.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
3.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
2.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
2.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
2.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
1.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
1.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LMBRD1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
217.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
114.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
59.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
56.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
53.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
51.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
51.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
51.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
51.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
48.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
48.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
46.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
46.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
46.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
46.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
46.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
46.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
45.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
44.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
43.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
43.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
43.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
41.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
40.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
40.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
39.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
39.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
39.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
39.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
39.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
39.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
39.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
39.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
39.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
39.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
39.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
39.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
39.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
38.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
38.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
38.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
38.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
38.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
38.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
38.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
37.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
37.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
37.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
37.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
36.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
36.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
36.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
35.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
35.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
35.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
35.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
35.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
35.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
34.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
34.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
34.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
34.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
34.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
34.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
34.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
34.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
33.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
33.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
33.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
33.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
33.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
33.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
33.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
33.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
33.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
32.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
32.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
32.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
32.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
32.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
32.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
32.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
32.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
31.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
31.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
31.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
31.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
31.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
31.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
30.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
30.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
30.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
30.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
30.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
30.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
30.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
30.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
30.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
29.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
29.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
29.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
29.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
29.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
29.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
29.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
29.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
29.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
29.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
29.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
29.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
29.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
28.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
28.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
28.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
28.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
28.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
28.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
27.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
27.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
27.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
27.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
27.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
27.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
27.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
27.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
27.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
27.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
27.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
27.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
27.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
27.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
26.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
26.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
26.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
26.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
26.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
25.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
25.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
25.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
25.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
25.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
25.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
25.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
25.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
25.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
25.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
25.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
25.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
25.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
25.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
25.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
25.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
25.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
24.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
24.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
24.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
24.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
24.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
24.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
24.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
24.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
24.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
24.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
24.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
24.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
24.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
24.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
24.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
24.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
24.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
24.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
24.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
23.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
23.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
23.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
23.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
23.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
23.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
23.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
23.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
23.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
22.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
22.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
22.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
22.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
22.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
22.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
22.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
22.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
22.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
22.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
22.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
22.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
22.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
22.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
21.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
21.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
21.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
21.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
21.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
21.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
21.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
21.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
21.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
21.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
21.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
20.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
20.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
20.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
20.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
20.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
20.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
20.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
20.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
20.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
20.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
20.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
20.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
20.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
20.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
19.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
19.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
19.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
19.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
19.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
19.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
18.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
18.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
18.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
18.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
18.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
18.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
18.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
17.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
17.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
17.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
17.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
17.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
17.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
17.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
17.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
17.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
17.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
17.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
17.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
16.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
16.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
16.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
16.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
16.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
16.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
16.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
16.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
16.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
16.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
15.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
15.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
15.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
15.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
15.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
15.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
15.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
15.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
14.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
14.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
14.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
14.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
14.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
14.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
13.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
13.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
13.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
13.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
12.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
12.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
12.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
12.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
12.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
12.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
11.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
11.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
11.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
10.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
10.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
9.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
9.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
9.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
9.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
9.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
8.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
8.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
8.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
8.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
8.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
7.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
7.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
7.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
7.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
7.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
7.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
7.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
7.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
7.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
7.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
6.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
6.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
6.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
6.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
6.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
6.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
6.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
6.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
6.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
6.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
6.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
5.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
5.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
5.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
5.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
5.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
5.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
4.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
4.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
4.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
4.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
4.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
4.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
4.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
4.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
3.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
3.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
3.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
3.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
3.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
2.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
2.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
2.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
2.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
2.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
2.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
2.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
2.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
2.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
2.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
2.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
1.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
1.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
1.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
1.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
1.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
1.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
1.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
1.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
0.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
0.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
0.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
0.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
0.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
0.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
0.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
0.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
0.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
0.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
0.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
0.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LMBRD1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
72.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
70.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
69.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
68.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
66.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
62.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
60.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
59.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
57.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
55.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
54.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
54.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
53.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
52.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
52.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
49.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
47.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
47.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
47.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
46.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
46.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
46.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
43.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
43.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
42.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
42.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
42.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
42.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
42.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
41.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
40.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
40.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
40.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
39.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
39.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
39.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
38.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
37.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
37.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
36.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
35.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
35.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
34.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
34.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
33.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
32.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
32.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
32.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
30.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
29.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
29.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
29.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
28.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
28.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
28.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
28.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
28.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
28.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
27.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
27.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
26.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
26.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
25.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
25.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
24.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
24.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
23.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
22.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
21.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
21.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
20.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
18.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
17.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
14.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
12.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
12.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
7.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
7.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
5.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
3.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
3.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LMBRD1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
100.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
43.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
41.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
40.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
40.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
39.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
38.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
38.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
37.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
36.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
36.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
35.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
35.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
35.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
33.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
33.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
32.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
32.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
31.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
31.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
31.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
30.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
30.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
30.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
30.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
28.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
28.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
27.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
27.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
27.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
26.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
26.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
26.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
25.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
25.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
24.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
24.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
24.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
24.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
24.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
23.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
23.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
23.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
22.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
22.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
22.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
22.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
22.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
22.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
21.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
21.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
21.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
21.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
21.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
21.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
20.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
20.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
20.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
20.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
20.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
20.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
19.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
18.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
18.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
17.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
17.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
17.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
17.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
17.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
16.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
16.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
16.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
16.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
16.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
15.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
15.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
15.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
15.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
15.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
14.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
14.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
14.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
13.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
13.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
13.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
13.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
13.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
13.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
12.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
12.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
12.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
11.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
11.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
11.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
10.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
10.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
10.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
10.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
10.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
10.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
9.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
9.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
9.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
9.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
9.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
9.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
9.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
9.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
8.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
8.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
8.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
7.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
7.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
6.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
6.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
6.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
6.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
6.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
6.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
6.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
6.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
6.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
5.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
5.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
5.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
5.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
5.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
5.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
5.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
4.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
4.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
4.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
4.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
4.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
4.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
4.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
4.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
4.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
3.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
3.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
3.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
3.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
3.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
3.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
3.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
3.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
2.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
2.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
2.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
2.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
2.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
2.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
2.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
2.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
2.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
1.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
1.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
1.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
1.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
1.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
1.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
1.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
1.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
1.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
1.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
0.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
0.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
0.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012280003
Tumor
1.1
CPT0092160003
Tumor
1.1
CPT0078800003
Tumor
1.0
CPT0007320003
Tumor
1.0
CPT0023690003
Tumor
0.9
CPT0011410003
Tumor
0.8
CPT0092740003
Normal
0.7
CPT0019130003
Tumor
0.7
CPT0023360001
Normal
0.7
CPT0010110003
Tumor
0.6
CPT0012290003
Normal
0.6
CPT0026420001
Normal
0.6
CPT0065430003
Tumor
0.6
CPT0079430001
Normal
0.6
CPT0079180003
Tumor
0.6
CPT0088480003
Tumor
0.6
CPT0092800003
Normal
0.6
CPT0079300001
Normal
0.6
CPT0010170001
Normal
0.5
CPT0006730001
Normal
0.5
CPT0025920001
Normal
0.5
CPT0086950003
Tumor
0.5
CPT0078530001
Normal
0.4
CPT0012640003
Normal
0.4
CPT0077140001
Normal
0.4
CPT0015810003
Tumor
0.4
CPT0014350001
Normal
0.4
CPT0012770003
Normal
0.4
CPT0065450001
Normal
0.4
CPT0069190001
Normal
0.4
CPT0007870001
Normal
0.4
CPT0063330001
Normal
0.4
CPT0001510001
Normal
0.4
CPT0009060003
Tumor
0.4
CPT0001350001
Normal
0.4
CPT0069000003
Tumor
0.4
CPT0086370003
Normal
0.3
CPT0092310003
Normal
0.3
CPT0020130001
Normal
0.3
CPT0001230001
Normal
0.3
CPT0066430001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0079510001
Normal
0.3
CPT0000790001
Normal
0.3
CPT0088500001
Normal
0.3
CPT0079410003
Tumor
0.3
CPT0088920001
Normal
0.3
CPT0086360003
Tumor
0.3
CPT0089480003
Normal
0.3
CPT0025610001
Normal
0.3
CPT0088970003
Tumor
0.3
CPT0000660001
Normal
0.3
CPT0086820003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0001190001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0077110003
Tumor
0.2
CPT0088640003
Normal
0.2
CPT0006950001
Normal
0.2
CPT0092190003
Normal
0.2
CPT0086830003
Normal
0.2
CPT0081620001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0001500009
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0088900003
Tumor
0.2
CPT0078940001
Normal
0.2
CPT0001540009
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0000890001
Normal
0.2
CPT0014160003
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0012090003
Normal
0.2
CPT0086890003
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0001550001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0009080003
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0019160001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0086970003
Normal
0.0
CPT0088550004
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0066520001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0018250001
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0078990003
Tumor
-0.2
CPT0015730003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0086030003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0069160003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0012180003
Tumor
-0.2
CPT0079380003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0065750003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0025880003
Tumor
-0.3
CPT0075570001
Normal
-0.3
CPT0066470004
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0088780001
Normal
-0.3
CPT0012080003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0017850003
Tumor
-0.3
CPT0088690003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0077320001
Normal
-0.4
CPT0088630003
Tumor
-0.4
CPT0064370003
Tumor
-0.4
CPT0015910003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0001340003
Tumor
-0.5
CPT0075720003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0001180009
Tumor
-0.5
CPT0066480003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0012670003
Tumor
-0.5
CPT0025170003
Tumor
-0.5
CPT0086870003
Tumor
-0.5
CPT0078510003
Tumor
-0.6
CPT0012550003
Tumor
-0.6
CPT0019990003
Tumor
-0.6
CPT0001260009
Tumor
-0.6
CPT0077490003
Tumor
-0.6
CPT0017410003
Tumor
-0.7
CPT0081880003
Tumor
-0.7
CPT0007860003
Tumor
-0.7
CPT0081990003
Tumor
-0.7
CPT0012900004
Tumor
-0.7
CPT0065930003
Tumor
-0.7
CPT0014370004
Tumor
-0.7
CPT0021240003
Tumor
-0.8
CPT0025290003
Tumor
-0.8
CPT0011240003
Tumor
-0.8
CPT0012370003
Tumor
-0.9
CPT0025110003
Tumor
-0.9
CPT0002270011
Tumor
-1.0
CPT0065690003
Tumor
-1.0
CPT0084560003
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
