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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SETD5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
28.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
25.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
25.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
19.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
18.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
18.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
17.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
17.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
17.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
17.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
16.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
15.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
15.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
14.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
14.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
13.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
12.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
12.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
12.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
11.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
11.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
11.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
10.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
9.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
6.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
5.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SETD5 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
37.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
34.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
31.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
30.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
28.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
26.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
25.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
25.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
25.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
25.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
25.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
24.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
24.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
23.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
23.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
23.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
23.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
23.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
22.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
22.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
22.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
22.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
22.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
21.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
21.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
21.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
21.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
21.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
21.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
21.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
20.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
20.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
20.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
20.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
20.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
19.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
19.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
19.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
19.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
19.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
19.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
19.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
19.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
19.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
19.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
18.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
18.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
18.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
18.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
18.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
18.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
17.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
17.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
17.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
17.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
17.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
17.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
17.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
17.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
17.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
17.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
17.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
17.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
16.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
16.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
16.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
16.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
16.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
16.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
16.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
16.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
16.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
16.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
16.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
16.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
16.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
16.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
15.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
15.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
15.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
15.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
15.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
15.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
15.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
15.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
15.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
15.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
15.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
15.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
15.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
15.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
15.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
15.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
15.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
15.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
14.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
14.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
14.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
14.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
14.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
14.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
14.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
14.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
14.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
14.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
14.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
14.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
14.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
14.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
14.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
13.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
13.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
13.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
13.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
13.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
13.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
13.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
13.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
13.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
13.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
13.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
13.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
13.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
13.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
12.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
12.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
12.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
12.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
12.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
12.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
12.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
11.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
11.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
11.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
11.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
11.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
11.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
11.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
11.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
11.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
11.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
11.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
11.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
10.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
10.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
10.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
10.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
10.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
10.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
10.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
10.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
10.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
10.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
10.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
10.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
10.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
9.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
9.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
9.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
9.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
9.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
9.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
9.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
9.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
9.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
9.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
9.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
9.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
9.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
9.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
8.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
8.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
8.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
8.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
8.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
8.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
8.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
8.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
8.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
8.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
8.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
8.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
8.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
8.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
8.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
8.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
7.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
7.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
7.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
7.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
7.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
7.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
7.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
7.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
7.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
7.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
7.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
7.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
7.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
7.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
7.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
7.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
7.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
6.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
6.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
6.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
6.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
6.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
6.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
6.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
6.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
6.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
6.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
6.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
6.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
5.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
5.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
5.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
5.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
5.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
5.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
5.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
5.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
5.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
4.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
4.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
4.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
3.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
2.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SETD5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
28.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
27.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
26.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
24.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
23.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
22.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
22.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
18.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
18.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
18.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
17.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
17.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
17.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
17.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
17.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
17.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
17.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
17.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
16.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
16.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
16.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
16.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
16.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
16.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
15.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
15.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
15.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
15.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
15.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
15.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
14.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
14.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
14.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
14.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
14.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
14.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
13.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
13.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
13.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
13.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
13.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
13.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
12.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
12.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
12.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
12.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
12.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
12.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
11.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
11.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
11.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
10.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
10.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
10.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
9.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
9.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
9.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
7.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
6.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SETD5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
56.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
43.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
39.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
36.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
35.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
34.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
34.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
33.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
33.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
32.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
31.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
28.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
28.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
28.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
28.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
28.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
28.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
27.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
26.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
26.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
26.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
25.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
24.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
24.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
23.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
23.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
22.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
22.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
22.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
22.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
22.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
21.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
21.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
21.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
21.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
20.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
20.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
20.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
19.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
19.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
19.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
19.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
19.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
19.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
18.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
18.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
18.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
18.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
18.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
17.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
17.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
17.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
17.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
17.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
17.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
17.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
17.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
17.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
17.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
17.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
16.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
16.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
16.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
16.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
16.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
16.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
16.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
15.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
15.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
15.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
15.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
15.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
15.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
15.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
15.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
15.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
14.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
14.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
14.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
14.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
14.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
14.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
14.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
13.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
13.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
13.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
13.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
13.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
13.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
13.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
13.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
13.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
12.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
12.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
12.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
12.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
12.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
12.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
12.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
12.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
12.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
11.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
11.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
11.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
11.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
11.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
11.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
11.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
11.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
11.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
10.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
10.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
10.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
10.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
10.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
10.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
9.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
9.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
9.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
9.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
9.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
9.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
9.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
9.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
9.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
9.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
9.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
9.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
9.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
9.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
8.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
8.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
8.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
8.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
8.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
7.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
7.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
7.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
7.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
7.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
7.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
7.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
6.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
6.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
6.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
6.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
5.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
5.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
4.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
4.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
3.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
