HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:18.1 nTPM
HPA Brain:43.0 nTPM
GTEx:18.1 nTPM
FANTOM5:77.7 Scaled Tags Per Million
Pig:76.9 nTPM
Mouse:25.3 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035574Antibody CAB017093
Glial cells Not detectedNot detected
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 43.0
Sample id Sample description nTPM
Hippocampus
nTPM: 40.4
2529 Female, age 94, left hemisphere 47.1
2621 Female, age 67, right hemisphere 43.1
2148 Female, age 91, left hemisphere 42.4
1911 Female, age 85, right hemisphere 39.3
1855 Male, age 76, left hemisphere 36.3
1898 Male, age 80, left hemisphere 34.2
Dentate gyrus
nTPM: 42.2
2531 Female, age 67, both hemispheres 45.0
2246 Female, age 85, both hemispheres 43.1
2010 Male, age 76, both hemispheres 42.6
2530 Female, age 94, left hemisphere 42.6
1927 Female, age 91, both hemispheres 40.5
2528 Male, age 74, both hemispheres 39.1
Entorhinal gyrus
nTPM: 37.8
2686 Male, age 75, right hemisphere 42.8
1938 Female, age 85, left hemisphere 40.3
2764 Male, age 80, right hemisphere 37.8
2613 Female, age 94, left hemisphere 35.6
2117 Female, age 91, right hemisphere 35.3
1787 Male, age 76, left hemisphere 34.9
Hippocampus, CA1
nTPM: 43.0
2749 Male, age 80, left hemisphere 49.0
2045 Male, age 76, both hemispheres 43.6
1873 Female, age 85, both hemispheres 42.3
2527 Male, age 74, both hemispheres 40.9
2082 Female, age 91, right hemisphere 39.1
Hippocampus, CA2
nTPM: 39.1
2113 Female, age 91, right hemisphere 42.6
2437 Female, age 94, left hemisphere 40.9
1963 Male, age 80, left hemisphere 40.7
2249 Male, age 74, both hemispheres 38.3
1940 Female, age 85, left hemisphere 37.5
1892 Male, age 76, both hemispheres 34.5
Hippocampus, CA3
nTPM: 42.2
2137 Male, age 80, left hemisphere 48.7
2861 Female, age 67, both hemispheres 46.4
2620 Female, age 94, left hemisphere 42.4
1891 Female, age 85, both hemispheres 39.0
2436 Male, age 74, both hemispheres 39.0
1867 Male, age 76, both hemispheres 37.9
Parahippocampal cortex
nTPM: 41.8
2622 Female, age 67, right hemisphere 49.4
2245 Female, age 91, both hemispheres 47.1
2018 Male, age 76, both hemispheres 44.1
2692 Male, age 74, both hemispheres 44.1
1933 Female, age 85, both hemispheres 40.1
2532 Female, age 72, left hemisphere 39.8
2250 Female, age 67, right hemisphere 39.6
2693 Female, age 94, both hemispheres 38.5
1990 Female, age 91, right hemisphere 38.0
1850 Male, age 80, both hemispheres 37.4
Perirhinal gyrus
nTPM: 39.1
1841 Female, age 85, right hemisphere 41.5
2521 Female, age 94, right hemisphere 40.0
1847 Female, age 91, left hemisphere 39.8
2848 Male, age 76, right hemisphere 38.2
1794 Male, age 80, right hemisphere 35.9
Subiculum
nTPM: 41.3
2438 Female, age 94, left hemisphere 50.3
2042 Male, age 76, both hemispheres 42.4
2729 Female, age 91, right hemisphere 40.4
1977 Female, age 85, both hemispheres 39.6
2619 Male, age 74, both hemispheres 39.6
1901 Male, age 80, both hemispheres 35.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 18.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.1
Samples: 197

Max nTPM: 34.1
Min nTPM: 5.5
Std nTPM: 4.0
Median nTPM: 18.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 34.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 29.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 29.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 28.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 28.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 25.7
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 25.6
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 25.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 25.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 25.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 25.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 77.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.7
FF:10153-102I9 76 years, female 86.9
FF:10169-103B7 60 years, female 68.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 76.9
Pig sample Sample description nTPM
Subiculum
nTPM: 74.8
Samples: 4

Max nTPM: 77.3
Min nTPM: 72.4
Sample A Female 72.4
Sample B Female 72.9
Sample C Male 77.3
Sample D Male 76.4
Dorsal hippocampus
nTPM: 69.1
Samples: 4

Max nTPM: 76.4
Min nTPM: 60.5
Sample A Female 60.5
Sample B Female 67.2
Sample C Male 72.3
Sample D Male 76.4
Entorhinal cortex
nTPM: 76.9
Samples: 4

Max nTPM: 87.4
Min nTPM: 69.6
Sample A Female 78.8
Sample B Female 71.9
Sample C Male 69.6
Sample D Male 87.4
Ventral hippocampus
nTPM: 74.7
Samples: 4

Max nTPM: 79.5
Min nTPM: 72.5
Sample A Female 72.9
Sample B Female 73.9
Sample C Male 72.5
Sample D Male 79.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 25.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.4
Samples: 4

Max nTPM: 27.4
Min nTPM: 22.1
Sample A Male 26.0
Sample B Male 25.9
Sample C Female 22.1
Sample D Female 27.4
Hippocampal formation
nTPM: 23.6
Samples: 4

Max nTPM: 26.9
Min nTPM: 21.0
Sample A Male 21.8
Sample B Male 26.9
Sample C Female 24.7
Sample D Female 21.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
37 Antisense, RP_Baylor_103285, Mouse strain C57BL/6J (56 days, male) 4.4
38 Antisense, RP_Baylor_103285, Mouse strain C57BL/6J (56 days, male) 2.8

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