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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS37C is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
40.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
40.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
40.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
39.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
39.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
36.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
35.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
34.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
34.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
32.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
32.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
30.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
29.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
27.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
27.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
27.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
27.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
27.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
26.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
24.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
24.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
23.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
23.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
22.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
22.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
22.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
22.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
22.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
22.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
21.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
21.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
20.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
18.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
18.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
18.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
18.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
17.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
17.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
17.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
17.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
17.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
16.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
16.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
15.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
15.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
14.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
13.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
12.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
12.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
11.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
11.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
11.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
11.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS37C is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
43.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
29.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
28.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
25.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
23.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
23.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
22.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
22.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
21.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
21.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
21.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
21.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
21.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
21.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
21.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
21.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
21.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
20.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
20.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
20.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
19.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
19.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
19.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
19.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
19.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
19.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
19.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
19.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
19.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
18.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
18.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
18.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
18.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
18.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
18.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
18.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
18.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
18.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
18.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
18.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
18.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
18.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
18.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
18.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
18.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
18.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
18.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
18.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
18.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
17.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
17.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
17.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
17.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
17.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
17.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
17.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
17.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
17.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
17.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
17.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
17.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
17.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
17.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
17.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
17.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
17.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
17.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
17.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
16.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
16.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
16.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
16.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
16.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
16.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
16.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
16.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
16.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
16.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
16.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
16.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
16.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
16.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
16.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
16.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
16.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
16.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
16.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
16.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
16.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
16.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
16.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
15.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
15.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
15.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
15.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
15.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
15.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
15.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
15.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
15.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
15.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
15.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
15.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
15.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
15.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
15.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
15.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
15.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
15.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
15.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
15.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
15.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
15.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
15.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
15.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
15.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
15.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
14.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
14.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
14.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
14.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
14.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
14.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
14.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
14.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
14.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
14.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
14.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
14.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
14.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
14.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
14.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
14.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
14.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
14.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
14.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
14.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
14.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
14.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
14.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
13.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
13.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
13.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
13.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
13.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
13.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
13.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
13.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
13.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
13.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
13.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
13.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
13.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
13.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
13.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
13.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
13.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
13.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
13.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
12.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
12.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
12.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
12.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
12.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
12.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
12.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
12.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
12.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
12.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
12.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
12.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
12.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
12.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
12.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
12.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
12.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
12.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
12.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
12.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
12.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
12.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
11.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
11.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
11.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
11.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
11.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
11.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
11.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
11.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
11.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
11.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
11.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
11.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
11.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
10.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
10.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
10.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
10.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
10.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
10.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
10.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
10.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
10.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
10.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
10.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
10.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
9.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
9.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
9.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
9.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
9.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
9.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
8.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
7.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
7.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
5.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS37C is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
23.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
22.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
22.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
22.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
21.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
21.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
20.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
19.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
19.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
19.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
18.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
17.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
17.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
16.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
16.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
16.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
16.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
16.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
16.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
15.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
15.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
15.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
15.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
15.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
15.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
14.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
14.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
14.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
14.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
14.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
13.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
13.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
12.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
12.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
12.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
12.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
12.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
12.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
11.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
11.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
10.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
10.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
10.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
9.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
9.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
9.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
9.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
9.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
8.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
6.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS37C is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
43.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
41.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
41.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
39.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
38.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
36.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
36.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
35.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
33.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
32.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
32.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
32.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
31.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
29.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
29.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
29.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
28.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
28.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
28.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
28.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
28.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
27.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
27.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
26.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
26.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
26.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
25.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
25.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
25.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
24.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
24.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
24.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
24.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
24.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
24.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
24.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
24.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
23.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
23.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
23.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
22.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
22.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
22.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
22.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
21.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
21.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
21.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
21.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
21.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
21.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
20.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
20.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
19.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
19.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
19.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
19.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
19.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
19.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
19.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
19.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
19.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
19.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
19.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
18.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
18.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
18.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
18.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
18.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
18.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
18.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
18.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
18.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
18.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
18.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
18.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
18.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
18.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
18.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
18.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
17.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
17.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
17.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
17.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
17.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
17.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
17.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
17.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
17.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
17.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
17.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
17.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
16.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
16.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
16.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
16.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
16.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
16.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
16.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
16.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
16.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
15.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
15.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
15.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
15.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
15.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
15.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
15.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
15.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
15.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
15.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
15.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
14.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
14.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
14.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
14.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
14.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
14.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
14.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
14.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
13.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
13.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
13.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
13.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
13.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
13.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
13.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
13.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
13.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
13.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
13.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
12.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
12.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
12.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
12.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
11.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
11.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
11.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
10.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
10.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
10.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
10.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
10.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
9.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
9.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
8.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
5.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
4.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
4.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
4.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0024680001
Normal
0.9
CPT0006440003
Tumor
0.7
CPT0079180003
Tumor
0.7
CPT0078660003
Tumor
0.6
CPT0088970003
Tumor
0.6
CPT0011240003
Tumor
0.6
CPT0063320003
Tumor
0.5
CPT0010120001
Normal
0.5
CPT0002370001
Normal
0.5
CPT0066480003
Tumor
0.5
CPT0077310003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0092290003
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0079270003
Tumor
0.4
CPT0009000003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0012290003
Normal
0.4
CPT0076330003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0086870003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0012640003
Normal
0.3
CPT0079480003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0087040003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0020020001
Normal
0.3
CPT0025290003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0088900003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0000660001
Normal
0.2
CPT0065930003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0079230003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0089460004
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0025050003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0064370003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0002270011
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0082010001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0079300001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0069190001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0013790003
Normal
0.0
CPT0092800003
Normal
0.0
CPT0065820001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0079430001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0088500001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0076350001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0019160001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0079000001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0089020003
Tumor
-0.2
CPT0065450001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0006950001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0088480003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0086370003
Normal
-0.3
CPT0086820003
Tumor
-0.3
CPT0024670003
Tumor
-0.4
CPT0014450004
Tumor
-0.4
CPT0088690003
Tumor
-0.5
CPT0063630003
Tumor
-0.5
CPT0023350003
Tumor
-0.5
CPT0012550003
Tumor
-0.5
CPT0012180003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
