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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDB1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
97.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
216.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
207.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
197.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
191.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
187.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
179.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
173.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
170.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
169.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
166.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
156.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
156.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
154.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
151.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
138.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
138.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
137.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
136.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
127.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
121.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
119.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
118.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
117.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
111.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
109.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
108.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
107.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
103.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
102.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
100.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
99.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
99.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
94.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
94.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
93.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
86.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
85.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
85.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
83.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
80.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
69.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
68.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
64.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
61.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
56.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
56.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
55.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
53.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
50.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
48.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
47.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
41.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
41.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
38.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
36.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
34.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
33.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
29.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
27.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
18.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDB1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
172.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
163.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
146.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
144.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
141.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
140.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
138.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
136.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
128.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
127.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
126.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
122.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
122.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
121.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
120.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
119.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
118.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
116.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
116.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
115.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
115.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
114.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
113.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
112.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
112.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
111.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
111.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
110.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
108.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
107.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
106.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
106.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
105.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
105.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
105.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
104.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
104.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
103.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
103.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
103.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
102.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
102.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
102.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
102.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
102.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
101.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
101.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
101.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
100.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
100.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
100.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
98.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
98.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
98.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
97.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
97.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
97.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
97.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
96.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
95.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
95.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
95.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
94.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
94.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
94.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
93.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
93.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
93.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
92.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
92.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
92.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
92.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
91.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
91.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
91.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
91.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
90.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
90.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
89.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
89.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
89.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
89.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
89.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
88.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
88.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
88.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
87.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
87.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
87.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
87.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
86.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
86.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
86.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
86.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
86.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
85.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
84.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
84.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
84.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
84.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
84.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
83.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
83.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
83.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
83.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
82.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
82.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
82.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
82.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
81.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
81.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
81.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
81.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
81.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
80.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
80.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
80.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
80.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
80.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
80.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
79.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
79.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
79.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
78.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
78.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
78.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
78.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
78.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
78.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
77.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
77.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
77.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
77.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
77.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
77.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
77.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
76.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
76.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
76.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
76.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
76.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
76.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
76.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
76.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
76.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
76.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
75.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
75.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
75.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
74.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
74.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
74.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
74.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
74.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
74.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
73.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
73.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
73.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
73.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
73.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
73.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
72.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
72.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
72.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
72.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
72.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
72.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
72.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
72.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
72.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
72.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
72.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
72.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
72.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
71.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
71.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
71.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
71.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
71.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
70.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
70.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
70.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
70.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
70.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
70.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
70.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
70.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
70.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
69.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
69.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
68.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
68.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
68.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
68.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
68.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
68.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
68.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
67.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
67.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
67.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
67.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
67.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
66.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
66.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
66.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
66.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
66.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
66.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
65.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
65.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
65.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
65.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
65.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
64.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
64.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
64.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
64.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
64.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
64.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
63.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
63.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
63.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
63.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
63.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
63.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
63.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
63.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
62.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
62.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
62.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
62.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
62.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
62.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
62.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
62.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
62.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
62.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
62.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
62.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
62.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
61.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
61.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
61.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
60.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
60.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
60.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
59.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
59.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
59.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
59.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
59.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
59.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
59.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
59.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
58.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
58.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
58.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
58.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
57.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
57.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
57.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
57.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
57.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
57.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
57.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
56.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
56.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
56.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
56.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
56.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
56.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
56.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
56.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
56.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
56.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
56.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
56.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
56.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
55.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
55.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
55.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
55.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
55.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
55.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
54.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
54.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
54.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
54.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
54.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
54.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
54.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
54.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
54.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
54.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
53.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
53.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
53.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
53.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
53.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
52.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
52.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
52.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
52.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
52.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
52.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
52.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
52.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
52.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
51.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
51.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
51.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
51.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
51.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
51.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
50.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
49.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
49.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
49.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
49.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
49.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
48.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
48.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
48.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
48.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
48.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
48.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
48.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
47.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
46.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
46.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
46.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
46.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
46.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
46.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
45.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
45.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
45.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
45.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
45.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
45.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
45.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
45.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
44.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
43.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
43.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
42.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
42.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
42.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
42.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
42.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
42.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
41.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
41.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
40.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
40.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
40.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
40.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
40.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
39.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
39.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
39.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
38.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
38.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
38.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
38.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
37.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
37.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
37.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
37.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
37.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
37.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
37.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
37.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
37.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
37.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
36.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
36.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
36.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
36.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
36.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
36.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
35.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
34.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
34.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
34.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
34.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
33.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
33.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
33.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
33.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
33.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
33.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
33.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
33.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
32.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
32.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
32.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
32.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
32.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
32.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
31.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
31.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
31.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
31.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
31.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
31.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
30.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
30.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
30.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
30.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
30.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
29.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
28.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
28.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
27.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
27.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
27.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
27.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
27.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
26.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
26.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
25.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
24.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
23.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
23.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
23.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
22.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
22.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
22.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
21.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
21.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
20.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
20.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
20.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
19.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
19.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
19.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
18.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
18.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
17.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
17.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
16.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
15.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
14.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
14.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
14.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
14.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
14.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
14.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
12.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
8.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
4.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDB1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
59.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
125.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
113.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
99.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
99.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
98.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
90.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
89.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
89.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
86.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
85.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
82.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
81.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
81.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
80.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
79.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
77.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
76.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
73.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
73.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
72.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
72.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
71.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
71.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
71.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
70.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
70.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
69.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
69.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
68.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
68.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
67.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
67.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
67.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
67.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
66.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
66.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
65.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
64.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
64.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
63.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
63.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
62.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
62.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
62.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
61.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
61.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
61.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
61.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
61.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
60.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
59.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
58.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
58.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
57.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
57.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
57.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
57.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
57.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
56.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
56.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
56.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
56.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
55.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
54.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
53.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
51.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
51.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
51.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
51.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
50.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
49.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
49.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
49.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
48.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
48.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
48.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
46.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
45.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
45.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
44.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
44.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
43.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
39.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
39.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
39.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
38.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
37.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
36.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
35.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
35.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
33.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
33.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
32.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
29.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
25.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
25.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDB1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
183.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
174.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
149.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
144.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
137.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
136.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
135.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
130.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
126.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
124.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
121.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
121.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
120.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
120.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
118.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
118.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
117.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
116.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
116.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
113.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
111.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
111.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
109.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
108.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
108.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
107.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
107.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
106.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
102.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
99.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
99.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
99.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
97.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
97.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
96.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
94.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
94.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
94.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
93.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
93.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
92.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
92.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
92.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
91.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
91.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
90.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
89.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
88.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
88.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
86.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
85.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
84.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
84.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
83.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
82.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
82.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
81.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
81.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
80.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
80.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
80.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
80.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
78.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
77.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
77.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
75.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
75.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
75.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
74.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
73.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
72.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
72.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
72.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
71.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
71.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
71.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
71.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
71.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
70.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
70.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
69.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
69.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
69.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
69.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
68.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
67.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
66.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
65.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
65.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
65.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
65.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
65.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
64.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
62.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
61.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
60.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
60.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
59.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
59.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
59.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
59.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
59.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
59.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
58.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
58.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
58.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
57.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
57.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
57.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
56.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
56.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
56.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
56.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
56.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
56.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
55.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
55.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
55.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
55.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
55.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
54.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
54.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
54.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
53.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
53.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
52.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
52.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
52.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
51.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
50.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
50.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
49.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
49.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
49.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
48.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
48.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
47.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
47.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
47.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
47.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
46.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
46.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
46.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
46.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
45.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
44.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
43.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
43.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
41.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
41.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
41.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
41.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
41.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
41.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
40.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
39.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
39.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
39.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
37.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
37.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
37.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
37.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
36.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
36.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
35.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
35.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
34.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
34.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
34.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
34.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
33.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
33.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
32.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
32.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
32.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
32.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
31.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
29.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
29.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
29.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
29.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
28.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
27.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
27.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
27.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
26.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
26.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
26.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
26.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
25.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
25.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
25.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
24.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
24.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
24.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
24.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
24.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
23.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
23.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
22.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
22.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
21.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
21.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
21.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
19.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
19.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
19.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
18.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
18.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
17.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
17.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
16.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
16.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
15.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
15.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
15.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
15.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
13.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
13.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
13.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
10.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
10.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
9.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
8.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
7.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
6.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
5.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
5.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0077110003
Tumor
0.8
CPT0006440003
Tumor
0.8
CPT0079180003
Tumor
0.8
CPT0026410003
Tumor
0.6
CPT0088970003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0009060003
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0065810003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0066470004
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0088480003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0079380003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0025290003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0000790001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0001510001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0014450004
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0002270011
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0009080003
Normal
N/A
CPT0088920001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0092310003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0012770003
Normal
0.0
CPT0012090003
Normal
0.0
CPT0007320003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0012550003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0001340003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0001180009
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0000890001
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0076330003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0012180003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0014160003
Tumor
-0.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.