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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
221.0
nTPM
FANTOM5:
376.9
Scaled Tags Per Million
Pig:
88.0
nTPM
Allen mouse:
5.1
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
221.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 221.0
2301
Female, age 85, both hemispheres
320.3
2188
Female, age 91, both hemispheres
245.2
2090
Male, age 80, both hemispheres
210.6
1984
Male, age 76, both hemispheres
107.8
Dorsal cochlear nucleus nTPM: 155.8
2187
Female, age 91, both hemispheres
233.6
2378
Male, age 80, both hemispheres
175.6
2370
Male, age 61, both hemispheres
137.1
2802
Male, age 74, right hemisphere
126.3
2058
Male, age 76, both hemispheres
106.3
Dorsal tegmental nucleus nTPM: 130.2
2083
Male, age 80, both hemispheres
199.3
2326
Male, age 74, both hemispheres
127.2
1936
Male, age 76, left hemisphere
97.8
2358
Male, age 61, both hemispheres
96.7
Dorsolateral tegmental area nTPM: 148.4
2751
Female, age 85, both hemispheres
260.0
2654
Male, age 80, both hemispheres
182.4
2337
Male, age 61, both hemispheres
172.0
2360
Male, age 74, both hemispheres
76.1
2141
Male, age 76, both hemispheres
51.8
Kolliker-Fuse nucleus nTPM: 174.4
2793
Female, age 91, left hemisphere
272.8
2163
Male, age 80, both hemispheres
159.2
2315
Male, age 76, right hemisphere
91.3
Lateral lemniscal nuclei nTPM: 163.5
2320
Female, age 91, left hemisphere
201.2
2036
Male, age 80, both hemispheres
170.6
2746
Female, age 85, left hemisphere
160.3
2453
Male, age 74, right hemisphere
147.6
2169
Male, age 76, both hemispheres
137.7
Lateral parabrachial nucleus nTPM: 164.4
2792
Male, age 76, both hemispheres
261.9
2013
Male, age 80, both hemispheres
186.9
2139
Female, age 85, right hemisphere
105.5
2790
Male, age 61, both hemispheres
103.1
Lateral vestibular nucleus nTPM: 178.6
2311
Male, age 80, both hemispheres
228.4
2184
Male, age 76, both hemispheres
128.7
Locus coeruleus nTPM: 62.3
2720
Male, age 74, both hemispheres
92.3
2162
Male, age 80, both hemispheres
86.2
2123
Female, age 91, both hemispheres
65.3
2317
Female, age 72, unknown
59.8
2014
Male, age 55, unknown
52.2
2788
Male, age 74, unknown
51.7
1980
Male, age 76, both hemispheres
28.3
Medial parabrachial nucleus nTPM: 193.0
2170
Female, age 91, both hemispheres
293.4
2854
Male, age 80, both hemispheres
232.4
2463
Female, age 85, right hemisphere
224.3
2786
Male, age 76, both hemispheres
125.2
2156
Male, age 61, both hemispheres
89.5
Medial periolivary nuclei nTPM: 164.1
2081
Male, age 80, both hemispheres
213.1
2458
Female, age 91, both hemispheres
191.2
2791
Male, age 74, right hemisphere
178.2
2063
Male, age 76, both hemispheres
124.4
2171
Female, age 85, both hemispheres
113.4
Motor facial nucleus nTPM: 185.8
2126
Male, age 61, both hemispheres
312.1
2697
Female, age 85, both hemispheres
215.2
2365
Male, age 74, right hemisphere
198.7
2795
Female, age 91, both hemispheres
148.8
2327
Male, age 80, both hemispheres
138.2
2062
Male, age 76, both hemispheres
101.5
Motor trigeminal nucleus nTPM: 158.2
2321
Female, age 91, both hemispheres
203.5
2560
Male, age 74, both hemispheres
199.4
2079
Male, age 80, both hemispheres
144.2
2335
Male, age 61, both hemispheres
131.3
2309
Male, age 76, both hemispheres
112.6
Nuclei of the trapezoid body nTPM: 144.6
2166
Male, age 80, both hemispheres
189.3
2368
Female, age 91, both hemispheres
165.3
2159
Male, age 61, both hemispheres
159.4
1983
Male, age 76, both hemispheres
120.8
2735
Female, age 85, both hemispheres
88.0
Nucleus raphe magnus nTPM: 149.6
2459
Female, age 91, both hemispheres
201.7
2051
Male, age 76, both hemispheres
198.9
2328
Male, age 80, both hemispheres
161.7
2455
Male, age 74, both hemispheres
138.4
2160
Male, age 61, both hemispheres
110.8
2172
Female, age 85, both hemispheres
86.0
Paramedian reticular nucleus nTPM: 158.2
2050
Female, age 85, both hemispheres
180.2
2052
Male, age 76, both hemispheres
164.2
2057
Male, age 80, both hemispheres
161.1
2313
Male, age 61, both hemispheres
127.2
Pedunculopontine tegmental nucleus nTPM: 131.8
2338
Male, age 61, both hemispheres
159.5
2334
Male, age 80, both hemispheres
134.5
1921
Female, age 85, both hemispheres
101.3
Pontine nuclei nTPM: 186.3
2454
Male, age 74, left hemisphere
262.3
2319
Female, age 91, both hemispheres
237.6
2109
Female, age 72, unknown
196.1
2727
Male, age 61, right hemisphere
179.1
1863
Male, age 55, unknown
173.1
2115
Male, age 80, left hemisphere
161.5
1968
Male, age 76, left hemisphere
147.5
2787
Female, age 85, both hemispheres
133.4
Pontine raphe nucleus nTPM: 94.8
2122
Female, age 85, midline
109.8
2853
Male, age 76, midline
79.7
Posteroventral cochlear nucleus nTPM: 187.0
2341
Male, age 80, both hemispheres
267.9
2135
Female, age 91, both hemispheres
252.1
2371
Male, age 61, both hemispheres
161.5
2070
Male, age 76, both hemispheres
156.3
2752
Female, age 85, both hemispheres
97.4
Principal sensory trigeminal nucleus nTPM: 161.2
2367
Female, age 91, left hemisphere
270.4
2008
Male, age 80, left hemisphere
134.0
2158
Male, age 61, both hemispheres
123.7
2324
Male, age 76, both hemispheres
116.6
Reticular pontine nucleus, caudal nTPM: 182.7
2559
Male, age 74, both hemispheres
220.5
2457
Female, age 91, both hemispheres
203.2
2092
Male, age 76, both hemispheres
164.9
2332
Male, age 80, right hemisphere
142.4
Reticular pontine nucleus, oral nTPM: 199.6
2361
Male, age 74, both hemispheres
260.7
2366
Female, age 91, both hemispheres
224.3
1939
Male, age 80, both hemispheres
187.0
2012
Female, age 85, both hemispheres
169.0
2167
Male, age 76, both hemispheres
157.1
Reticulotegmental nucleus nTPM: 150.9
2322
Female, age 91, both hemispheres
225.2
2333
Male, age 80, both hemispheres
172.6
2452
Male, age 74, both hemispheres
130.5
2325
Male, age 76, both hemispheres
75.3
Spinal trigeminal nucleus, oral nTPM: 136.7
2164
Male, age 80, both hemispheres
198.2
1978
Male, age 76, both hemispheres
111.3
2737
Female, age 85, both hemispheres
100.6
Subcoeruleus area nTPM: 148.9
2369
Female, age 85, left hemisphere
297.1
1958
Male, age 80, both hemispheres
161.2
2089
Male, age 76, left hemisphere
127.0
2323
Female, age 91, left hemisphere
85.8
2451
Male, age 74, both hemispheres
73.6
Superior olive nTPM: 177.4
2329
Male, age 80, right hemisphere
195.6
2561
Female, age 91, both hemispheres
186.9
2364
Male, age 74, right hemisphere
184.8
2020
Male, age 76, both hemispheres
179.5
1875
Female, age 85, both hemispheres
140.1
Ventral periolivary nuclei nTPM: 148.6
2023
Male, age 76, both hemispheres
209.1
2165
Male, age 80, both hemispheres
155.6
2794
Female, age 91, left hemisphere
129.4
2130
Female, age 85, both hemispheres
100.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 176.6
2840
Female, age 85, both hemispheres
208.0
2456
Female, age 91, both hemispheres
196.6
2161
Male, age 80, both hemispheres
171.2
1959
Male, age 76, both hemispheres
169.6
2359
Male, age 61, both hemispheres
158.2
2449
Male, age 74, both hemispheres
156.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
88.0
Pig sample
Sample description
nTPM
Pons nTPM: 88.0
Samples: 4
Max nTPM: 197.4
Min nTPM: 25.8
Sample A
Female
25.8
Sample B
Female
42.2
Sample C
Male
86.4
Sample D
Male
197.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
