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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
40.1
nTPM
HPA Brain:
64.4
nTPM
GTEx:
40.1
nTPM
FANTOM5:
35.1
Scaled Tags Per Million
Pig:
1.1
nTPM
Mouse:
2.8
nTPM
Allen mouse:
0.4
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
64.4
Sample id
Sample description
nTPM
Amygdala nTPM: 64.4
2814
Male, age 76, right hemisphere
114.2
2695
Female, age 67, right hemisphere
67.5
2514
Male, age 75, right hemisphere
54.9
1987
Female, age 91, left hemisphere
43.1
2517
Female, age 94, left hemisphere
42.4
Basal amygdala nTPM: 36.0
1955
Male, age 76, both hemispheres
53.2
2110
Male, age 80, left hemisphere
41.8
2685
Female, age 94, left hemisphere
39.7
2827
Female, age 67, right hemisphere
34.7
2609
Male, age 75, right hemisphere
31.9
2243
Female, age 91, right hemisphere
15.1
Central amygdala nTPM: 46.1
1905
Male, age 76, both hemispheres
85.0
2239
Male, age 80, left hemisphere
42.2
2701
Female, age 91, right hemisphere
40.6
2515
Male, age 75, right hemisphere
31.5
2826
Female, age 94, left hemisphere
31.5
Corticomedial amygdala nTPM: 24.7
2240
Male, age 76, both hemispheres
35.8
2429
Female, age 94, left hemisphere
30.7
2428
Male, age 75, right hemisphere
30.2
2535
Female, age 67, right hemisphere
25.1
2829
Male, age 80, left hemisphere
17.7
2242
Female, age 91, right hemisphere
8.5
Lateral amygdala nTPM: 53.1
1883
Male, age 76, both hemispheres
105.5
2830
Female, age 67, right hemisphere
52.9
2256
Male, age 80, left hemisphere
48.3
2516
Male, age 75, right hemisphere
44.8
2534
Female, age 94, left hemisphere
34.4
2255
Female, age 91, right hemisphere
32.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
40.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 40.1
Samples: 152
Max nTPM: 267.7
Min nTPM: 1.9
Std nTPM: 34.0
Median nTPM: 31.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
267.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
193.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
146.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
127.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
126.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
103.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
102.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
95.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
94.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
93.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
91.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
87.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
86.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
77.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
76.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
73.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
71.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
68.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
66.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
64.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
64.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
63.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
61.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
59.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
57.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
57.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
57.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
57.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
56.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
56.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
55.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
54.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
53.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
53.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
52.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
52.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
52.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
51.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
51.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
50.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
49.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
49.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
46.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
45.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
45.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
44.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
44.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
44.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
44.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
42.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
42.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
42.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
42.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
42.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
41.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
40.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
39.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
39.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
38.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
37.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
36.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
36.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
35.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
35.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
35.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
35.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
35.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
34.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
33.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
33.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
33.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
33.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
32.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
31.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
31.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
31.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
31.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
31.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
31.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
31.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
30.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
30.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
29.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
29.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
29.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
29.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
28.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
28.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
27.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
27.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
26.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
26.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
26.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
26.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
25.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
24.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
24.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
24.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
24.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
22.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
21.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
21.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
21.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
21.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
21.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
21.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
20.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
20.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
20.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
20.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
20.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
20.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
19.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
19.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
19.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
19.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
19.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
19.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
18.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
18.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
18.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
17.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
16.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
16.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
15.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
15.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
15.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
15.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
14.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
14.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
13.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
13.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
13.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
13.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
13.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
12.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
11.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
11.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
10.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
10.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
9.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
9.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
9.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
9.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
9.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
7.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
7.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
7.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
6.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
6.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
4.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 2.8
Samples: 4
Max nTPM: 5.0
Min nTPM: 1.2
Sample A
Male
2.9
Sample B
Male
2.0
Sample C
Female
5.0
Sample D
Female
1.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.