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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VKORC1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
65.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
260.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
162.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
154.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
110.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
105.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
104.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
97.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
96.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
91.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
85.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
82.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
81.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
81.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
79.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
79.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
75.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
74.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
73.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
73.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
70.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
70.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
70.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
65.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
65.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
65.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
63.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
61.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
61.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
61.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
60.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
59.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
59.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
58.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
58.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
57.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
57.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
57.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
56.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
52.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
51.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
50.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
49.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
49.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
49.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
48.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
48.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
48.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
47.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
44.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
44.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
41.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
40.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
40.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
40.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
39.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
39.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
37.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
35.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
35.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
34.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
30.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
27.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
17.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VKORC1 is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
226.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
901.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
553.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
551.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
543.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
538.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
509.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
509.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
493.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
489.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
483.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
482.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
472.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
471.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
468.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
449.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
446.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
433.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
433.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
429.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
428.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
417.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
417.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
410.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
407.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
404.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
403.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
399.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
399.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
396.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
396.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
388.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
386.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
377.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
370.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
369.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
369.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
369.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
367.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
366.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
359.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
357.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
356.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
351.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
351.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
351.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
350.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
347.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
345.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
339.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
338.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
337.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
336.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
332.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
331.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
330.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
330.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
326.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
323.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
322.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
321.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
320.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
319.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
318.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
317.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
317.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
315.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
315.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
312.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
311.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
311.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
310.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
310.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
310.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
309.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
307.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
306.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
304.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
304.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
302.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
300.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
299.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
296.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
296.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
295.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
294.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
294.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
294.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
294.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
292.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
289.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
288.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
288.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
287.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
286.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
284.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
284.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
284.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
283.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
283.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
282.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
282.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
282.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
281.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
280.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
279.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
279.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
279.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
276.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
276.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
275.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
275.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
273.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
273.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
273.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
273.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
272.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
271.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
270.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
270.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
269.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
268.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
265.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
264.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
264.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
264.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
263.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
262.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
262.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
262.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
262.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
262.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
262.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
262.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
261.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
261.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
261.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
261.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
260.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
259.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
259.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
259.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
258.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
258.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
257.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
257.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
257.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
257.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
257.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
256.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
256.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
254.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
254.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
254.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
253.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
253.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
253.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
253.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
253.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
252.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
252.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
252.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
251.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
251.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
250.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
250.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
250.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
249.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
248.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
248.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
248.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
247.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
247.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
246.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
246.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
246.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
246.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
245.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
244.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
244.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
243.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
243.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
242.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
242.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
242.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
242.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
241.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
241.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
240.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
240.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
240.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
239.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
238.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
237.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
237.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
236.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
235.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
235.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
235.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
233.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
233.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
233.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
233.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
232.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
232.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
231.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
230.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
230.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
230.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
229.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
229.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
229.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
229.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
229.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
229.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
228.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
228.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
228.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
228.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
228.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
227.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
227.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
227.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
227.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
226.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
225.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
224.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
223.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
223.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
223.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
222.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
222.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
221.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
221.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
221.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
221.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
221.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
220.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
219.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
219.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
219.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
219.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
219.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
218.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
218.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
218.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
218.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
218.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
217.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
217.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
217.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
217.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
217.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
216.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
216.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
216.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
216.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
215.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
215.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
215.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
215.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
214.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
214.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
214.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
214.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
213.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
212.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
212.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
212.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
211.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
211.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
211.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
210.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
210.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
210.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
210.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
209.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
209.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
209.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
208.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
208.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
208.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
207.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
206.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
205.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
205.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
205.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
204.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
204.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
204.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
202.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
202.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
202.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
202.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
201.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
201.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
201.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
200.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
200.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
200.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
199.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
199.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
199.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
199.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
199.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
198.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
198.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
198.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
198.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
197.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
197.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
196.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
195.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
195.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
195.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
195.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
195.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
194.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
194.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
194.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
194.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
193.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
193.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
192.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
192.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
192.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
191.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
191.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
191.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
190.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
189.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
189.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
188.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
188.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
188.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
187.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
187.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
186.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
185.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
185.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
185.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
185.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
185.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
185.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
185.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
185.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
185.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
185.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
184.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
184.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
184.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
184.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
183.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
183.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
183.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
183.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
182.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
182.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
181.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
180.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
180.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
179.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
178.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
178.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
178.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
178.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
178.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
177.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
177.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
177.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
177.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
177.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
177.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
176.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
176.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
176.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
176.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
175.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
175.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
174.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
174.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
174.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
174.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
174.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
173.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
173.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
173.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
172.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
171.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
171.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
171.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
171.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
170.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
170.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
170.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
170.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
168.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
167.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
167.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
167.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
166.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
166.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
166.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
166.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
165.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
165.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
164.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
164.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
164.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
164.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
163.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
163.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
163.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
163.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
162.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
162.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
162.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
162.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
162.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
162.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
162.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
161.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
159.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
158.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
158.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
157.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
157.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
156.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
155.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
155.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
154.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
153.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
153.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
153.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
153.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
152.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
152.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
152.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
151.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
151.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
151.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
151.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
150.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
149.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
149.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
148.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
147.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
147.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
147.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
146.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
144.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
144.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
143.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
143.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
143.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
143.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
143.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
143.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
143.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
142.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
142.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
141.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
141.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
141.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
139.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
138.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
138.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
137.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
135.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
134.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
132.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
132.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
130.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
129.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
129.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
129.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
128.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
126.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
126.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
124.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
122.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
122.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
122.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
122.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
121.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
120.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
118.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
117.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
117.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
116.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
115.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
113.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
112.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
112.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
105.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
101.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
99.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
97.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
96.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
95.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
90.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
86.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
84.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
81.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
77.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
68.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
68.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
63.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
63.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
60.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
59.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
59.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
58.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
56.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
53.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
51.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
47.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
47.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
45.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
44.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
36.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VKORC1 is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
208.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
790.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
533.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
410.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
359.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
322.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
319.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
309.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
304.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
302.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
290.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
285.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
285.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
284.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
284.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
275.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
274.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
274.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
273.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
273.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
269.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
268.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
259.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
250.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
248.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
248.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
246.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
241.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
240.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
239.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
236.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
235.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
232.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
232.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
231.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
228.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
224.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
220.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
217.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
213.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
208.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
207.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
206.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
202.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
200.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
199.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
199.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
196.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
194.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
192.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
187.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
185.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
183.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
183.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
181.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
177.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
177.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
173.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
173.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
172.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
172.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
171.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
171.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
171.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
167.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
166.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
164.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
161.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
160.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
155.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
155.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
154.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
152.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
152.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
152.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
151.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
147.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
147.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
147.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
147.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
146.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
145.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
144.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
143.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
143.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
142.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
141.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
139.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
138.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
135.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
131.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
130.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
127.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
122.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
120.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
115.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
112.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
110.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
108.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
93.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VKORC1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
177.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
617.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
463.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
428.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
410.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
373.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
371.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
352.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
327.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
327.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
324.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
323.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
316.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
313.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
312.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
309.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
308.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
305.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
304.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
303.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
301.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
301.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
299.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
289.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
289.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
287.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
284.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
284.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
275.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
275.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
274.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
273.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
271.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
269.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
267.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
266.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
260.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
256.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
256.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
254.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
254.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
250.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
248.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
246.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
244.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
240.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
240.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
239.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
239.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
239.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
239.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
238.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
238.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
235.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
235.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
235.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
234.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
233.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
230.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
230.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
230.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
228.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
227.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
227.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
225.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
224.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
221.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
219.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
219.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
219.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
219.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
216.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
215.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
213.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
210.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
208.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
207.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
207.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
207.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
207.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
206.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
206.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
205.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
204.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
204.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
204.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
202.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
202.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
201.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
200.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
200.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
199.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
197.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
197.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
197.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
197.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
195.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
195.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
192.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
192.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
190.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
189.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
188.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
187.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
186.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
185.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
185.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
185.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
184.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
183.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
182.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
181.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
181.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
181.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
181.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
180.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
180.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
180.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
180.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
179.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
179.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
179.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
179.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
178.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
177.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
176.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
176.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
176.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
174.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
174.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
173.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
172.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
172.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
172.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
170.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
169.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
168.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
167.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
167.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
166.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
166.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
166.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
166.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
166.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
165.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
165.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
165.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
165.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
164.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
164.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
163.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
162.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
162.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
160.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
160.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
158.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
156.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
156.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
155.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
155.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
155.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
155.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
153.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
153.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
153.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
152.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
152.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
151.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
150.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
150.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
150.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
149.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
149.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
149.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
149.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
148.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
147.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
146.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
146.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
146.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
145.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
144.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
143.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
143.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
143.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
142.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
139.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
139.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
139.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
138.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
138.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
136.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
135.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
133.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
133.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
132.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
132.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
131.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
131.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
131.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
130.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
130.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
130.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
130.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
129.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
128.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
128.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
126.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
126.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
125.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
125.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
124.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
124.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
123.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
123.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
123.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
123.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
122.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
122.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
120.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
120.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
120.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
119.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
119.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
118.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
118.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
116.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
116.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
116.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
115.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
115.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
114.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
112.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
112.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
111.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
111.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
110.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
109.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
107.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
107.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
107.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
104.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
104.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
103.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
103.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
102.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
101.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
99.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
97.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
97.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
96.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
96.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
94.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
94.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
94.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
94.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
93.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
91.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
91.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
90.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
88.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
87.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
87.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
87.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
87.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
87.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
87.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
84.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
84.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
84.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
82.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
79.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
79.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
78.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
77.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
73.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
69.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
61.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
60.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
57.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
43.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
40.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
38.4
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
2.1
CPT0086950003
Tumor
1.7
CPT0001340003
Tumor
1.7
CPT0079270003
Tumor
1.6
CPT0088690003
Tumor
1.6
CPT0019130003
Tumor
1.4
CPT0076330003
Tumor
1.4
CPT0001180009
Tumor
1.3
CPT0025110003
Tumor
1.3
CPT0078830003
Tumor
1.2
CPT0023350003
Tumor
1.1
CPT0086820003
Tumor
1.1
CPT0025880003
Tumor
1.0
CPT0079480003
Tumor
1.0
CPT0088630003
Tumor
0.9
CPT0063630003
Tumor
0.9
CPT0075130003
Tumor
0.9
CPT0007320003
Tumor
0.9
CPT0025580004
Tumor
0.8
CPT0000640003
Tumor
0.8
CPT0025230003
Tumor
0.7
CPT0065870003
Tumor
0.7
CPT0081880003
Tumor
0.7
CPT0087040003
Tumor
0.7
CPT0078800003
Tumor
0.6
CPT0078990003
Tumor
0.6
CPT0092160003
Tumor
0.6
CPT0001260009
Tumor
0.6
CPT0089020003
Tumor
0.6
CPT0025290003
Tumor
0.6
CPT0089460004
Tumor
0.6
CPT0084560003
Tumor
0.6
CPT0014450004
Tumor
0.6
CPT0088480003
Tumor
0.6
CPT0092730003
Tumor
0.6
CPT0077110003
Tumor
0.6
CPT0086870003
Tumor
0.5
CPT0088900003
Tumor
0.5
CPT0002270011
Tumor
0.5
CPT0025050003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0001220008
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0065810003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0007860003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0092740003
Normal
0.1
CPT0078840001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0001540009
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0065750003
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0084590001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0086370003
Normal
-0.3
CPT0026410003
Tumor
-0.3
CPT0025920001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0006900003
Tumor
-0.3
CPT0063330001
Normal
-0.3
CPT0015910003
Tumor
-0.3
CPT0014130001
Normal
-0.4
CPT0077490003
Tumor
-0.4
CPT0077320001
Normal
-0.4
CPT0089040001
Normal
-0.4
CPT0023360001
Normal
-0.4
CPT0065930003
Tumor
-0.4
CPT0000660001
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0092310003
Normal
-0.4
CPT0088780001
Normal
-0.4
CPT0000780007
Tumor
-0.4
CPT0075720003
Tumor
-0.4
CPT0007470001
Normal
-0.4
CPT0002370001
Normal
-0.5
CPT0079510001
Normal
-0.5
CPT0066480003
Tumor
-0.5
CPT0019990003
Tumor
-0.5
CPT0001550001
Normal
-0.5
CPT0069160003
Tumor
-0.5
CPT0006530001
Normal
-0.6
CPT0019160001
Normal
-0.6
CPT0006950001
Normal
-0.6
CPT0075170001
Normal
-0.6
CPT0078940001
Normal
-0.6
CPT0075570001
Normal
-0.6
CPT0077140001
Normal
-0.6
CPT0066470004
Tumor
-0.6
CPT0066430001
Normal
-0.6
CPT0079300001
Normal
-0.6
CPT0000890001
Normal
-0.7
CPT0001190001
Normal
-0.7
CPT0066520001
Normal
-0.7
CPT0026420001
Normal
-0.7
CPT0077500001
Normal
-0.7
CPT0014470001
Normal
-0.7
CPT0079000001
Normal
-0.7
CPT0081620001
Normal
-0.8
CPT0014350001
Normal
-0.8
CPT0010120001
Normal
-0.8
CPT0010170001
Normal
-0.8
CPT0020120003
Tumor
-0.8
CPT0020020001
Normal
-0.8
CPT0020130001
Normal
-0.8
CPT0078670001
Normal
-0.9
CPT0075560003
Tumor
-0.9
CPT0025060001
Normal
-1.0
CPT0012670003
Tumor
-1.1
CPT0065450001
Normal
-1.1
CPT0021240003
Tumor
-1.2
CPT0012180003
Tumor
-1.2
CPT0025610001
Normal
-1.2
CPT0012080003
Tumor
-1.3
CPT0017850003
Tumor
-1.3
CPT0012290003
Normal
-1.5
CPT0009000003
Tumor
-1.6
CPT0078660003
Tumor
-1.6
CPT0012370003
Tumor
-1.6
CPT0069190001
Normal
-1.7
CPT0069000003
Tumor
-1.7
CPT0078530001
Normal
-1.9
CPT0012640003
Normal
-2.0
CPT0012090003
Normal
-2.0
CPT0012550003
Tumor
-2.0
CPT0082010001
Normal
-2.1
CPT0081990003
Tumor
-2.1
CPT0018250001
Normal
-2.2
CPT0069010001
Normal
-2.3
CPT0078510003
Tumor
-2.4
CPT0024670003
Tumor
-2.5
CPT0009060003
Tumor
-2.5
CPT0013790003
Normal
-2.6
CPT0009020003
Normal
-2.9
CPT0012900004
Tumor
-3.1
CPT0017450001
Normal
-3.1
CPT0024680001
Normal
-3.1
CPT0009080003
Normal
-3.4
CPT0012770003
Normal
-3.4
CPT0012570003
Normal
-3.5
CPT0011240003
Tumor
-3.6
CPT0012920003
Normal
-3.8
CPT0079180003
Tumor
-3.8
CPT0017410003
Tumor
-4.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
