HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		119.341
RNA expressioni
Consensus:46.8 nTPM
HPA Brain:162.1 nTPM
GTEx:46.8 nTPM
FANTOM5:87.3 Scaled Tags Per Million
Pig:88.4 nTPM
Mouse:109.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030790Antibody HPA075862
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB078782
Hippocampal formation mean intensity 119.341
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 54.097
Molecular layer of the dentate gyrus 41.700
Granular dentate gyrus 88.695
CA1 - oriens layer 58.947
CA1 - pyramidal layer 105.376
CA1 - radiatum layer 58.683
CA2 - oriens layer 49.570
CA2 - pyramidal layer 88.177
CA2 - radiatum layer 42.534
CA3 - oriens layer 42.308
CA3 - pyramidal layer 87.500
CA3 - radiatum layer 41.208
Stratum lucidum 39.222
Lacunosum moleculare 26.533
Subiculum 74.423

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 162.1
Sample id Sample description nTPM
Hippocampus
nTPM: 121.3
2621 Female, age 67, right hemisphere 169.0
2148 Female, age 91, left hemisphere 149.8
1898 Male, age 80, left hemisphere 108.6
1911 Female, age 85, right hemisphere 106.9
2529 Female, age 94, left hemisphere 99.2
1855 Male, age 76, left hemisphere 94.5
Dentate gyrus
nTPM: 143.4
2531 Female, age 67, both hemispheres 255.3
1927 Female, age 91, both hemispheres 157.4
2528 Male, age 74, both hemispheres 141.6
2246 Female, age 85, both hemispheres 132.9
2530 Female, age 94, left hemisphere 94.0
2010 Male, age 76, both hemispheres 79.1
Entorhinal gyrus
nTPM: 162.1
2686 Male, age 75, right hemisphere 225.6
2613 Female, age 94, left hemisphere 203.4
2764 Male, age 80, right hemisphere 186.5
1787 Male, age 76, left hemisphere 145.7
1938 Female, age 85, left hemisphere 137.3
2117 Female, age 91, right hemisphere 74.3
Hippocampus, CA1
nTPM: 120.2
2749 Male, age 80, left hemisphere 151.0
2527 Male, age 74, both hemispheres 124.1
2045 Male, age 76, both hemispheres 123.0
2082 Female, age 91, right hemisphere 104.4
1873 Female, age 85, both hemispheres 98.2
Hippocampus, CA2
nTPM: 115.5
1892 Male, age 76, both hemispheres 132.2
1940 Female, age 85, left hemisphere 127.0
2113 Female, age 91, right hemisphere 115.5
2437 Female, age 94, left hemisphere 115.3
1963 Male, age 80, left hemisphere 109.0
2249 Male, age 74, both hemispheres 94.0
Hippocampus, CA3
nTPM: 158.3
2861 Female, age 67, both hemispheres 289.7
2620 Female, age 94, left hemisphere 228.2
2137 Male, age 80, left hemisphere 165.1
1867 Male, age 76, both hemispheres 99.7
2436 Male, age 74, both hemispheres 83.8
1891 Female, age 85, both hemispheres 83.4
Parahippocampal cortex
nTPM: 159.9
2622 Female, age 67, right hemisphere 268.5
2245 Female, age 91, both hemispheres 184.2
2532 Female, age 72, left hemisphere 182.9
2692 Male, age 74, both hemispheres 180.4
1850 Male, age 80, both hemispheres 163.5
1990 Female, age 91, right hemisphere 160.2
2693 Female, age 94, both hemispheres 146.4
2250 Female, age 67, right hemisphere 111.1
1933 Female, age 85, both hemispheres 103.2
2018 Male, age 76, both hemispheres 99.1
Perirhinal gyrus
nTPM: 138.1
1794 Male, age 80, right hemisphere 154.6
1847 Female, age 91, left hemisphere 143.9
2848 Male, age 76, right hemisphere 135.0
1841 Female, age 85, right hemisphere 131.5
2521 Female, age 94, right hemisphere 125.6
Subiculum
nTPM: 103.3
2619 Male, age 74, both hemispheres 143.7
2729 Female, age 91, right hemisphere 107.4
1977 Female, age 85, both hemispheres 100.1
1901 Male, age 80, both hemispheres 99.8
2438 Female, age 94, left hemisphere 92.0
2042 Male, age 76, both hemispheres 76.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 46.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.8
Samples: 197

Max nTPM: 131.1
Min nTPM: 0.5
Std nTPM: 28.3
Median nTPM: 44.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 131.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 124.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 113.7
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 107.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 105.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 103.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 101.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 96.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 96.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 95.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 94.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 87.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.3
FF:10153-102I9 76 years, female 88.4
FF:10169-103B7 60 years, female 86.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 88.4
Pig sample Sample description nTPM
Subiculum
nTPM: 52.2
Samples: 4

Max nTPM: 70.4
Min nTPM: 44.3
Sample A Female 70.4
Sample B Female 44.3
Sample C Male 44.3
Sample D Male 49.6
Dorsal hippocampus
nTPM: 61.0
Samples: 4

Max nTPM: 77.2
Min nTPM: 42.4
Sample A Female 77.2
Sample B Female 66.4
Sample C Male 42.4
Sample D Male 57.8
Entorhinal cortex
nTPM: 88.5
Samples: 4

Max nTPM: 105.3
Min nTPM: 76.8
Sample A Female 105.3
Sample B Female 83.5
Sample C Male 76.8
Sample D Male 88.2
Ventral hippocampus
nTPM: 54.7
Samples: 4

Max nTPM: 70.6
Min nTPM: 38.3
Sample A Female 53.5
Sample B Female 38.3
Sample C Male 56.4
Sample D Male 70.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 109.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.4
Samples: 4

Max nTPM: 126.2
Min nTPM: 95.4
Sample A Male 117.8
Sample B Male 126.2
Sample C Female 95.4
Sample D Female 98.3
Hippocampal formation
nTPM: 108.6
Samples: 4

Max nTPM: 120.7
Min nTPM: 97.0
Sample A Male 97.0
Sample B Male 120.7
Sample C Female 112.8
Sample D Female 104.0

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