HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:33.9 nTPM
HPA Brain:16.7 nTPM
GTEx:33.9 nTPM
FANTOM5:111.4 Scaled Tags Per Million
Pig:22.5 nTPM
Mouse:83.0 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040516
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 16.7
Sample id Sample description nTPM
Hippocampus
nTPM: 15.9
2529 Female, age 94, left hemisphere 18.8
1855 Male, age 76, left hemisphere 18.1
1898 Male, age 80, left hemisphere 16.0
1911 Female, age 85, right hemisphere 15.9
2148 Female, age 91, left hemisphere 13.8
2621 Female, age 67, right hemisphere 13.0
Dentate gyrus
nTPM: 16.0
2530 Female, age 94, left hemisphere 19.5
2010 Male, age 76, both hemispheres 16.5
2528 Male, age 74, both hemispheres 16.0
2246 Female, age 85, both hemispheres 15.9
2531 Female, age 67, both hemispheres 14.7
1927 Female, age 91, both hemispheres 13.2
Entorhinal gyrus
nTPM: 14.9
1938 Female, age 85, left hemisphere 16.9
2764 Male, age 80, right hemisphere 15.4
2686 Male, age 75, right hemisphere 14.9
2117 Female, age 91, right hemisphere 14.7
1787 Male, age 76, left hemisphere 14.3
2613 Female, age 94, left hemisphere 13.1
Hippocampus, CA1
nTPM: 15.3
1873 Female, age 85, both hemispheres 17.5
2749 Male, age 80, left hemisphere 15.4
2527 Male, age 74, both hemispheres 15.0
2045 Male, age 76, both hemispheres 14.3
2082 Female, age 91, right hemisphere 14.3
Hippocampus, CA2
nTPM: 15.9
1892 Male, age 76, both hemispheres 20.8
2113 Female, age 91, right hemisphere 15.8
1963 Male, age 80, left hemisphere 15.7
2249 Male, age 74, both hemispheres 15.7
2437 Female, age 94, left hemisphere 14.9
1940 Female, age 85, left hemisphere 12.6
Hippocampus, CA3
nTPM: 15.4
1867 Male, age 76, both hemispheres 17.1
2137 Male, age 80, left hemisphere 15.8
1891 Female, age 85, both hemispheres 15.6
2436 Male, age 74, both hemispheres 15.3
2861 Female, age 67, both hemispheres 14.6
2620 Female, age 94, left hemisphere 14.3
Parahippocampal cortex
nTPM: 16.7
2532 Female, age 72, left hemisphere 18.7
2692 Male, age 74, both hemispheres 18.0
2245 Female, age 91, both hemispheres 17.3
1850 Male, age 80, both hemispheres 17.2
2018 Male, age 76, both hemispheres 17.2
2250 Female, age 67, right hemisphere 16.9
2622 Female, age 67, right hemisphere 16.7
1933 Female, age 85, both hemispheres 16.3
1990 Female, age 91, right hemisphere 15.1
2693 Female, age 94, both hemispheres 13.9
Perirhinal gyrus
nTPM: 15.0
1841 Female, age 85, right hemisphere 16.4
2848 Male, age 76, right hemisphere 14.7
1847 Female, age 91, left hemisphere 14.6
2521 Female, age 94, right hemisphere 14.6
1794 Male, age 80, right hemisphere 14.5
Subiculum
nTPM: 15.3
1901 Male, age 80, both hemispheres 16.4
2619 Male, age 74, both hemispheres 15.6
1977 Female, age 85, both hemispheres 15.3
2729 Female, age 91, right hemisphere 15.0
2042 Male, age 76, both hemispheres 14.8
2438 Female, age 94, left hemisphere 14.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 33.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.9
Samples: 197

Max nTPM: 88.4
Min nTPM: 18.8
Std nTPM: 8.7
Median nTPM: 32.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 88.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 69.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 55.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 51.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 50.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 50.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 50.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 49.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 49.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 49.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 49.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 111.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.4
FF:10169-103B7 60 years, female 129.8
FF:10153-102I9 76 years, female 93.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.5
Pig sample Sample description nTPM
Subiculum
nTPM: 21.6
Samples: 4

Max nTPM: 22.3
Min nTPM: 21.2
Sample A Female 22.3
Sample B Female 21.4
Sample C Male 21.6
Sample D Male 21.2
Dorsal hippocampus
nTPM: 21.5
Samples: 4

Max nTPM: 22.8
Min nTPM: 20.6
Sample A Female 20.6
Sample B Female 22.8
Sample C Male 20.6
Sample D Male 21.9
Entorhinal cortex
nTPM: 22.5
Samples: 4

Max nTPM: 23.8
Min nTPM: 21.2
Sample A Female 21.9
Sample B Female 23.1
Sample C Male 21.2
Sample D Male 23.8
Ventral hippocampus
nTPM: 20.8
Samples: 4

Max nTPM: 22.3
Min nTPM: 19.5
Sample A Female 21.8
Sample B Female 22.3
Sample C Male 19.5
Sample D Male 19.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 83.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.7
Samples: 4

Max nTPM: 90.7
Min nTPM: 65.3
Sample A Male 80.9
Sample B Male 81.9
Sample C Female 90.7
Sample D Female 65.3
Hippocampal formation
nTPM: 83.1
Samples: 4

Max nTPM: 95.5
Min nTPM: 74.8
Sample A Male 95.5
Sample B Male 82.8
Sample C Female 74.8
Sample D Female 79.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
70565252 Antisense, RP_050623_04_E12, Mouse strain C57BL/6J (56 days, male) 2.8

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