We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
728.3
nTPM
FANTOM5:
1518.8
Scaled Tags Per Million
Pig:
335.9
nTPM
Allen mouse:
13.2
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
728.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 375.2
2301
Female, age 85, both hemispheres
431.2
1984
Male, age 76, both hemispheres
423.4
2188
Female, age 91, both hemispheres
374.6
2090
Male, age 80, both hemispheres
271.5
Dorsal cochlear nucleus nTPM: 342.2
2802
Male, age 74, right hemisphere
372.8
2187
Female, age 91, both hemispheres
359.2
2058
Male, age 76, both hemispheres
356.9
2370
Male, age 61, both hemispheres
323.0
2378
Male, age 80, both hemispheres
299.1
Dorsal tegmental nucleus nTPM: 350.1
2083
Male, age 80, both hemispheres
395.6
2358
Male, age 61, both hemispheres
355.2
1936
Male, age 76, left hemisphere
352.3
2326
Male, age 74, both hemispheres
297.2
Dorsolateral tegmental area nTPM: 273.9
2654
Male, age 80, both hemispheres
355.1
2751
Female, age 85, both hemispheres
294.5
2141
Male, age 76, both hemispheres
288.9
2360
Male, age 74, both hemispheres
239.3
2337
Male, age 61, both hemispheres
191.5
Kolliker-Fuse nucleus nTPM: 437.0
2793
Female, age 91, left hemisphere
538.1
2163
Male, age 80, both hemispheres
502.9
2315
Male, age 76, right hemisphere
270.1
Lateral lemniscal nuclei nTPM: 616.1
2169
Male, age 76, both hemispheres
761.6
2453
Male, age 74, right hemisphere
651.5
2036
Male, age 80, both hemispheres
624.3
2746
Female, age 85, left hemisphere
545.4
2320
Female, age 91, left hemisphere
497.5
Lateral parabrachial nucleus nTPM: 419.3
2139
Female, age 85, right hemisphere
643.5
2013
Male, age 80, both hemispheres
403.3
2790
Male, age 61, both hemispheres
375.8
2792
Male, age 76, both hemispheres
254.8
Lateral vestibular nucleus nTPM: 458.1
2184
Male, age 76, both hemispheres
574.8
2311
Male, age 80, both hemispheres
341.4
Locus coeruleus nTPM: 391.9
2123
Female, age 91, both hemispheres
499.9
2720
Male, age 74, both hemispheres
451.5
2014
Male, age 55, unknown
375.5
2788
Male, age 74, unknown
373.2
2317
Female, age 72, unknown
370.0
2162
Male, age 80, both hemispheres
353.6
1980
Male, age 76, both hemispheres
319.4
Medial parabrachial nucleus nTPM: 386.9
2854
Male, age 80, both hemispheres
499.0
2156
Male, age 61, both hemispheres
422.6
2170
Female, age 91, both hemispheres
366.4
2786
Male, age 76, both hemispheres
364.9
2463
Female, age 85, right hemisphere
281.8
Medial periolivary nuclei nTPM: 578.8
2171
Female, age 85, both hemispheres
885.5
2063
Male, age 76, both hemispheres
704.2
2791
Male, age 74, right hemisphere
474.6
2458
Female, age 91, both hemispheres
450.2
2081
Male, age 80, both hemispheres
379.5
Motor facial nucleus nTPM: 603.3
2062
Male, age 76, both hemispheres
758.9
2327
Male, age 80, both hemispheres
683.9
2697
Female, age 85, both hemispheres
618.0
2365
Male, age 74, right hemisphere
612.8
2795
Female, age 91, both hemispheres
545.3
2126
Male, age 61, both hemispheres
400.6
Motor trigeminal nucleus nTPM: 441.2
2079
Male, age 80, both hemispheres
586.2
2560
Male, age 74, both hemispheres
500.1
2335
Male, age 61, both hemispheres
385.1
2321
Female, age 91, both hemispheres
384.6
2309
Male, age 76, both hemispheres
350.1
Nuclei of the trapezoid body nTPM: 696.1
2159
Male, age 61, both hemispheres
943.5
2735
Female, age 85, both hemispheres
796.1
1983
Male, age 76, both hemispheres
656.4
2166
Male, age 80, both hemispheres
553.1
2368
Female, age 91, both hemispheres
531.2
Nucleus raphe magnus nTPM: 728.3
2160
Male, age 61, both hemispheres
1040.1
2172
Female, age 85, both hemispheres
959.5
2455
Male, age 74, both hemispheres
686.2
2328
Male, age 80, both hemispheres
630.6
2051
Male, age 76, both hemispheres
555.7
2459
Female, age 91, both hemispheres
497.9
Paramedian reticular nucleus nTPM: 433.1
2050
Female, age 85, both hemispheres
578.0
2313
Male, age 61, both hemispheres
452.8
2057
Male, age 80, both hemispheres
419.3
2052
Male, age 76, both hemispheres
282.4
Pedunculopontine tegmental nucleus nTPM: 330.1
2338
Male, age 61, both hemispheres
343.5
2334
Male, age 80, both hemispheres
333.0
1921
Female, age 85, both hemispheres
313.6
Pontine nuclei nTPM: 616.8
2787
Female, age 85, both hemispheres
850.6
2727
Male, age 61, right hemisphere
813.3
1863
Male, age 55, unknown
737.9
1968
Male, age 76, left hemisphere
636.0
2109
Female, age 72, unknown
609.7
2115
Male, age 80, left hemisphere
462.0
2454
Male, age 74, left hemisphere
447.2
2319
Female, age 91, both hemispheres
378.0
Pontine raphe nucleus nTPM: 438.7
2122
Female, age 85, midline
584.5
2853
Male, age 76, midline
293.0
Posteroventral cochlear nucleus nTPM: 321.8
2752
Female, age 85, both hemispheres
438.1
2070
Male, age 76, both hemispheres
373.2
2341
Male, age 80, both hemispheres
302.7
2371
Male, age 61, both hemispheres
292.0
2135
Female, age 91, both hemispheres
202.9
Principal sensory trigeminal nucleus nTPM: 639.9
2158
Male, age 61, both hemispheres
985.8
2008
Male, age 80, left hemisphere
634.1
2324
Male, age 76, both hemispheres
485.1
2367
Female, age 91, left hemisphere
454.5
Reticular pontine nucleus, caudal nTPM: 517.0
2332
Male, age 80, right hemisphere
724.2
2092
Male, age 76, both hemispheres
540.2
2457
Female, age 91, both hemispheres
460.9
2559
Male, age 74, both hemispheres
342.8
Reticular pontine nucleus, oral nTPM: 419.7
2361
Male, age 74, both hemispheres
541.5
2012
Female, age 85, both hemispheres
479.2
2366
Female, age 91, both hemispheres
431.4
1939
Male, age 80, both hemispheres
337.1
2167
Male, age 76, both hemispheres
309.2
Reticulotegmental nucleus nTPM: 444.4
2325
Male, age 76, both hemispheres
508.9
2333
Male, age 80, both hemispheres
438.7
2452
Male, age 74, both hemispheres
422.9
2322
Female, age 91, both hemispheres
407.2
Spinal trigeminal nucleus, oral nTPM: 412.6
2164
Male, age 80, both hemispheres
504.0
2737
Female, age 85, both hemispheres
396.7
1978
Male, age 76, both hemispheres
337.0
Subcoeruleus area nTPM: 414.4
2089
Male, age 76, left hemisphere
610.1
1958
Male, age 80, both hemispheres
494.1
2323
Female, age 91, left hemisphere
400.3
2451
Male, age 74, both hemispheres
303.7
2369
Female, age 85, left hemisphere
263.9
Superior olive nTPM: 558.0
1875
Female, age 85, both hemispheres
673.2
2329
Male, age 80, right hemisphere
581.2
2561
Female, age 91, both hemispheres
555.5
2020
Male, age 76, both hemispheres
499.0
2364
Male, age 74, right hemisphere
481.3
Ventral periolivary nuclei nTPM: 653.6
2130
Female, age 85, both hemispheres
834.5
2165
Male, age 80, both hemispheres
750.5
2794
Female, age 91, left hemisphere
592.2
2023
Male, age 76, both hemispheres
437.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 490.3
2449
Male, age 74, both hemispheres
642.8
1959
Male, age 76, both hemispheres
572.8
2161
Male, age 80, both hemispheres
523.9
2840
Female, age 85, both hemispheres
512.0
2456
Female, age 91, both hemispheres
399.5
2359
Male, age 61, both hemispheres
290.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
335.9
Pig sample
Sample description
nTPM
Pons nTPM: 335.9
Samples: 4
Max nTPM: 423.3
Min nTPM: 259.1
Sample A
Female
423.3
Sample B
Female
259.1
Sample C
Male
280.6
Sample D
Male
380.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
