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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
112.8
nTPM
HPA Brain:
444.1
nTPM
GTEx:
112.8
nTPM
FANTOM5:
753.4
Scaled Tags Per Million
Pig:
276.6
nTPM
Mouse:
216.9
nTPM
Allen mouse:
16.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
444.1
Sample id
Sample description
nTPM
Amygdala nTPM: 335.6
2814
Male, age 76, right hemisphere
474.9
2517
Female, age 94, left hemisphere
336.5
1987
Female, age 91, left hemisphere
308.6
2695
Female, age 67, right hemisphere
287.5
2514
Male, age 75, right hemisphere
270.3
Basal amygdala nTPM: 444.1
2243
Female, age 91, right hemisphere
567.0
2685
Female, age 94, left hemisphere
470.7
2110
Male, age 80, left hemisphere
459.0
1955
Male, age 76, both hemispheres
419.9
2827
Female, age 67, right hemisphere
405.8
2609
Male, age 75, right hemisphere
342.4
Central amygdala nTPM: 384.2
1905
Male, age 76, both hemispheres
443.7
2826
Female, age 94, left hemisphere
421.8
2239
Male, age 80, left hemisphere
421.0
2515
Male, age 75, right hemisphere
324.6
2701
Female, age 91, right hemisphere
309.8
Corticomedial amygdala nTPM: 415.4
2242
Female, age 91, right hemisphere
503.1
2829
Male, age 80, left hemisphere
496.2
2240
Male, age 76, both hemispheres
415.3
2535
Female, age 67, right hemisphere
405.7
2429
Female, age 94, left hemisphere
373.3
2428
Male, age 75, right hemisphere
299.0
Lateral amygdala nTPM: 383.2
2534
Female, age 94, left hemisphere
485.1
1883
Male, age 76, both hemispheres
475.0
2256
Male, age 80, left hemisphere
388.7
2830
Female, age 67, right hemisphere
345.4
2255
Female, age 91, right hemisphere
315.0
2516
Male, age 75, right hemisphere
290.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
112.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 112.8
Samples: 152
Max nTPM: 262.7
Min nTPM: 4.6
Std nTPM: 48.8
Median nTPM: 107.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
262.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
238.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
224.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
217.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
210.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
207.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
205.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
204.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
203.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
193.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
190.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
187.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
184.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
183.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
182.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
178.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
178.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
176.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
173.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
173.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
169.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
167.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
167.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
163.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
163.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
162.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
161.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
159.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
158.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
156.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
155.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
155.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
153.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
153.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
150.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
150.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
148.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
145.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
144.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
143.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
143.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
141.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
141.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
140.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
140.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
140.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
140.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
139.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
138.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
137.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
132.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
130.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
130.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
129.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
127.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
127.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
126.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
126.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
124.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
123.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
121.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
119.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
118.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
117.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
116.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
115.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
115.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
114.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
114.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
114.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
111.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
111.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
111.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
110.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
108.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
107.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
107.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
106.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
106.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
106.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
105.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
103.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
100.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
99.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
99.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
98.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
94.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
93.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
92.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
91.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
91.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
90.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
89.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
89.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
88.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
88.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
86.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
86.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
86.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
86.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
85.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
84.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
83.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
82.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
81.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
80.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
80.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
78.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
77.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
77.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
77.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
76.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
76.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
75.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
75.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
75.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
74.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
73.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
73.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
73.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
71.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
70.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
69.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
68.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
65.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
65.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
65.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
62.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
61.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
61.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
59.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
57.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
56.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
56.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
55.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
53.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
53.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
53.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
52.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
52.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
50.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
48.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
47.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
47.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
46.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
44.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
42.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
41.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
39.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
30.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
29.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
4.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
216.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 216.9
Samples: 4
Max nTPM: 242.0
Min nTPM: 190.5
Sample A
Male
222.6
Sample B
Male
190.5
Sample C
Female
242.0
Sample D
Female
212.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.