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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NAB2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
41.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
36.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
35.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
35.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
34.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
34.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
33.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
31.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
31.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
30.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
23.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
23.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
22.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
22.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
21.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
20.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
20.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
20.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
19.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
19.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
18.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
18.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
16.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
16.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
16.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
16.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
16.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
15.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
15.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
14.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
14.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
14.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
13.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
11.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
11.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
9.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
8.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
8.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
6.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
5.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
4.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
4.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NAB2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
88.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
82.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
60.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
51.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
50.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
50.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
49.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
48.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
47.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
46.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
44.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
44.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
44.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
44.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
42.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
42.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
42.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
41.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
40.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
38.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
38.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
35.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
34.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
33.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
33.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
33.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
33.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
33.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
33.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
32.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
32.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
32.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
32.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
31.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
30.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
29.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
29.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
29.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
29.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
29.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
28.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
28.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
28.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
27.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
27.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
27.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
27.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
27.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
27.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
27.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
26.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
26.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
26.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
26.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
26.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
26.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
26.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
25.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
25.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
25.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
24.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
24.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
24.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
24.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
24.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
24.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
24.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
24.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
24.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
24.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
24.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
23.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
23.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
23.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
23.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
23.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
23.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
23.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
23.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
23.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
23.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
23.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
23.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
23.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
22.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
22.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
22.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
22.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
22.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
22.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
22.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
22.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
22.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
21.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
21.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
21.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
21.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
21.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
21.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
21.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
21.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
21.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
21.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
21.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
21.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
20.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
20.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
20.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
20.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
20.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
20.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
20.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
20.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
20.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
20.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
19.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
19.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
19.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
19.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
19.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
19.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
19.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
19.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
19.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
19.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
19.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
18.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
18.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
18.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
18.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
18.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
18.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
18.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
18.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
18.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
18.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
18.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
18.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
17.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
17.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
17.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
17.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
17.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
17.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
17.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
17.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
17.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
17.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
17.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
17.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
17.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
17.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
17.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
17.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
16.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
16.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
16.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
16.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
16.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
16.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
16.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
16.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
16.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
15.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
15.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
15.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
15.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
15.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
15.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
15.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
15.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
15.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
14.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
14.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
14.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
14.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
14.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
14.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
14.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
14.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
14.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
14.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
14.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
14.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
14.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
14.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
14.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
14.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
14.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
13.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
13.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
13.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
13.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
13.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
13.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
13.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
13.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
13.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
13.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
13.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
13.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
13.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
13.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
12.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
12.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
12.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
12.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
12.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
12.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
12.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
12.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
12.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
12.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
12.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
11.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
11.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
11.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
11.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
11.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
11.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
11.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
11.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
11.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
11.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
11.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
11.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
11.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
11.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
10.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
10.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
10.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
10.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
10.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
10.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
10.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
10.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
10.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
10.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
10.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
10.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
10.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
10.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
10.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
10.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
9.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
9.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
9.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
9.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
9.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
9.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
9.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
9.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
9.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
9.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
9.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
9.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
9.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
8.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
8.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
8.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
8.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
8.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
8.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
8.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
8.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
8.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
7.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
7.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
7.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
7.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
7.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
6.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
6.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
6.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
6.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
6.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
6.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
6.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
6.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
6.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
6.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
6.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
6.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
6.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
5.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
5.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
5.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
5.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
5.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
5.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
5.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
5.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
5.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
5.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
4.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
4.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
4.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
4.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
4.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
4.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
4.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
3.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
3.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
2.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NAB2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
51.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
48.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
40.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
38.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
37.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
35.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
34.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
33.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
32.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
30.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
30.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
30.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
30.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
30.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
29.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
29.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
28.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
28.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
27.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
26.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
26.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
26.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
25.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
25.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
24.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
23.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
23.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
23.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
22.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
22.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
21.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
20.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
19.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
19.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
18.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
18.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
18.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
18.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
18.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
17.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
17.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
17.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
17.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
16.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
15.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
14.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
14.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
13.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
13.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
12.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
12.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
12.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
12.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
11.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
11.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
11.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
11.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
11.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
10.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
10.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
10.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
9.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
8.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
8.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
7.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
7.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NAB2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
101.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
100.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
80.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
80.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
77.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
75.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
59.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
57.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
56.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
55.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
52.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
52.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
52.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
52.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
51.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
50.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
48.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
48.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
47.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
45.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
45.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
45.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
43.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
43.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
42.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
41.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
41.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
41.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
40.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
40.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
40.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
40.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
40.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
39.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
38.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
37.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
37.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
37.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
36.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
36.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
35.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
34.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
33.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
33.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
33.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
33.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
33.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
32.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
32.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
32.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
31.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
31.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
31.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
31.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
31.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
29.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
29.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
29.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
28.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
28.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
28.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
28.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
27.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
27.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
27.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
27.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
26.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
26.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
26.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
26.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
26.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
25.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
25.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
25.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
25.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
25.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
25.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
25.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
25.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
25.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
24.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
24.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
24.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
24.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
24.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
24.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
23.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
23.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
22.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
22.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
22.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
22.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
22.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
22.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
22.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
21.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
21.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
21.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
21.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
20.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
20.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
20.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
20.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
20.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
20.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
20.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
20.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
20.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
20.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
19.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
19.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
19.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
19.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
19.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
19.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
19.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
19.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
19.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
19.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
19.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
18.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
18.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
18.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
18.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
18.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
18.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
18.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
17.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
17.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
17.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
16.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
16.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
16.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
15.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
15.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
15.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
15.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
15.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
15.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
15.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
15.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
15.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
14.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
14.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
14.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
14.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
14.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
14.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
14.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
13.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
13.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
13.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
13.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
13.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
13.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
13.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
13.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
13.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
12.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
12.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
12.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
12.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
11.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
11.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
11.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
10.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
10.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
10.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
10.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
10.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
9.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
9.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
9.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
9.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
8.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
8.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
8.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
8.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
7.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
7.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
7.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
7.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
7.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
6.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
5.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
4.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
4.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
4.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
4.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
3.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
0.9
CPT0077110003
Tumor
0.9
CPT0076330003
Tumor
0.9
CPT0063630003
Tumor
0.8
CPT0088550004
Tumor
0.6
CPT0010160003
Tumor
0.6
CPT0025580004
Tumor
0.6
CPT0012080003
Tumor
0.6
CPT0015910003
Tumor
0.6
CPT0075560003
Tumor
0.6
CPT0000780007
Tumor
0.6
CPT0006440003
Tumor
0.6
CPT0092190003
Normal
0.5
CPT0014450004
Tumor
0.5
CPT0079300001
Normal
0.5
CPT0075720003
Tumor
0.5
CPT0069190001
Normal
0.4
CPT0088760003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0075170001
Normal
0.4
CPT0077490003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0063320003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0012550003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0009000003
Tumor
0.2
CPT0066520001
Normal
0.2
CPT0017850003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0084590001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0075570001
Normal
0.2
CPT0077320001
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0023690003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0001550001
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0009080003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0009060003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0063640001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0026420001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0086970003
Normal
0.1
CPT0000790001
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0000890001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0075130003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0025110003
Tumor
-0.2
CPT0092740003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0086030003
Tumor
-0.2
CPT0012570003
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0015810003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0007320003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0012280003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0089020003
Tumor
-0.2
CPT0025060001
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0079380003
Tumor
-0.3
CPT0001190001
Normal
-0.3
CPT0025230003
Tumor
-0.3
CPT0078660003
Tumor
-0.3
CPT0077500001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0025050003
Tumor
-0.3
CPT0014130001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0001340003
Tumor
-0.3
CPT0078510003
Tumor
-0.4
CPT0086890003
Normal
-0.4
CPT0065750003
Tumor
-0.4
CPT0012770003
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0079230003
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0025610001
Normal
-0.5
CPT0078800003
Tumor
-0.5
CPT0002270011
Tumor
-0.5
CPT0077140001
Normal
-0.6
CPT0015730003
Tumor
-0.6
CPT0023350003
Tumor
-0.7
CPT0088970003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
