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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPIB is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
500.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1790.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1526.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
783.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
752.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
706.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
704.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
671.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
629.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
628.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
626.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
624.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
605.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
586.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
568.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
567.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
559.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
553.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
542.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
540.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
527.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
519.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
515.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
515.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
502.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
487.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
484.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
472.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
468.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
467.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
465.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
460.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
460.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
455.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
451.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
450.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
449.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
449.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
444.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
443.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
439.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
428.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
427.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
426.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
407.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
405.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
405.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
403.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
402.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
380.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
373.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
367.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
355.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
334.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
332.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
320.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
296.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
291.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
286.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
279.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
276.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
270.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
248.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
198.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPIB is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
635.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2950.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1591.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1553.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1516.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
1408.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
1377.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
1364.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1296.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
1292.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
1227.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1218.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
1216.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
1184.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
1176.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
1170.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
1169.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
1143.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
1135.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1098.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
1057.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
1049.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
1041.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
1027.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
1019.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
990.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
990.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
987.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
975.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
973.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
964.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
959.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
958.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
955.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
952.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
947.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
946.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
945.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
938.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
929.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
928.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
925.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
925.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
924.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
920.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
914.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
899.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
897.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
893.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
892.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
891.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
887.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
883.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
873.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
870.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
870.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
859.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
854.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
853.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
852.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
851.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
844.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
843.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
842.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
838.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
835.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
835.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
835.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
833.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
832.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
831.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
827.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
826.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
820.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
817.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
815.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
814.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
813.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
811.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
806.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
806.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
805.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
800.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
799.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
796.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
795.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
795.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
794.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
794.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
790.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
787.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
784.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
783.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
781.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
781.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
779.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
778.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
778.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
773.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
771.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
771.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
768.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
767.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
765.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
765.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
765.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
764.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
762.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
761.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
759.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
753.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
753.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
752.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
750.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
750.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
749.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
748.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
747.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
746.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
746.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
744.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
742.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
741.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
740.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
737.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
736.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
734.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
732.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
728.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
727.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
726.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
725.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
725.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
722.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
721.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
721.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
720.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
717.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
716.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
716.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
714.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
711.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
710.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
709.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
708.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
708.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
707.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
707.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
707.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
706.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
700.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
700.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
699.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
698.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
695.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
695.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
692.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
690.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
689.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
687.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
685.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
682.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
681.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
680.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
680.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
679.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
679.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
679.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
677.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
676.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
676.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
675.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
674.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
673.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
672.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
672.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
669.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
667.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
667.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
665.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
664.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
664.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
662.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
662.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
662.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
661.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
659.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
659.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
658.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
658.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
657.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
655.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
654.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
653.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
652.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
650.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
650.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
650.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
648.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
647.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
646.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
645.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
645.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
644.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
642.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
641.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
640.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
638.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
638.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
638.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
637.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
636.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
636.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
635.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
635.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
635.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
634.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
632.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
631.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
631.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
630.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
628.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
627.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
625.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
625.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
623.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
622.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
622.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
621.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
620.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
619.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
619.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
618.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
618.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
617.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
616.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
615.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
614.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
613.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
612.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
612.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
611.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
611.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
606.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
606.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
603.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
602.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
602.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
601.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
600.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
600.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
600.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
599.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
599.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
598.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
597.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
597.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
596.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
596.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
596.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
595.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
595.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
595.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
594.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
594.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
594.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
594.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
593.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
592.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
592.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
592.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
592.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
591.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
591.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
591.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
591.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
588.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
588.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
587.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
587.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
586.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
585.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
585.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
585.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
584.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
584.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
583.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
582.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
581.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
581.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
581.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
581.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
581.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
581.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
578.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
577.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
577.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
576.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
573.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
573.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
572.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
572.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
569.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
569.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
569.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
568.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
568.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
568.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
568.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
566.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
565.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
564.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
561.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
560.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
560.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
560.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
559.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
558.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
558.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
558.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
557.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
556.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
553.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
553.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
552.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
552.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
551.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
550.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
549.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
549.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
549.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
548.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
548.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
547.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
547.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
547.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
547.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
547.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
546.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
545.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
545.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
544.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
544.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
544.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
544.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
543.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
543.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
542.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
542.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
541.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
540.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
539.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
536.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
536.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
536.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
535.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
534.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
533.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
532.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
530.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
529.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
528.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
528.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
526.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
526.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
525.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
522.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
522.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
522.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
522.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
522.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
521.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
519.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
519.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
518.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
516.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
516.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
515.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
515.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
511.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
511.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
510.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
510.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
508.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
508.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
507.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
507.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
506.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
505.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
505.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
503.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
502.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
501.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
501.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
501.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
500.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
500.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
499.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
499.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
499.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
498.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
497.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
494.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
493.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
492.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
488.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
486.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
486.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
485.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
485.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
485.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
483.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
482.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
481.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
479.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
478.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
477.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
477.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
475.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
473.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
473.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
472.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
471.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
471.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
471.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
471.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
471.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
470.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
460.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
459.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
458.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
457.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
457.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
456.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
454.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
452.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
450.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
448.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
447.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
447.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
446.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
446.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
445.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
444.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
443.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
443.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
441.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
440.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
438.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
436.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
434.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
433.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
432.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
431.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
430.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
429.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
429.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
427.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
427.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
426.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
425.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
423.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
423.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
422.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
422.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
420.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
419.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
418.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
416.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
413.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
411.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
409.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
409.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
408.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
407.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
405.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
404.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
401.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
400.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
400.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
399.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
399.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
396.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
396.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
395.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
395.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
394.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
393.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
392.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
389.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
388.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
381.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
379.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
379.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
378.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
376.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
375.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
375.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
369.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
368.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
367.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
363.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
358.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
355.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
349.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
347.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
339.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
337.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
335.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
333.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
328.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
323.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
284.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
284.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
283.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
271.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
262.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
250.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
247.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
244.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
188.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPIB is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
513.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
1314.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
1042.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
937.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
860.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
802.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
788.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
788.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
779.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
770.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
764.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
738.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
721.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
707.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
690.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
689.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
683.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
677.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
665.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
651.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
645.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
643.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
641.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
618.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
615.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
589.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
581.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
556.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
543.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
542.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
532.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
529.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
526.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
525.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
523.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
520.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
518.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
507.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
504.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
500.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
499.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
499.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
498.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
492.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
482.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
480.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
479.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
476.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
464.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
464.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
464.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
457.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
457.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
455.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
454.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
453.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
453.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
452.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
450.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
449.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
444.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
443.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
441.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
440.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
438.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
435.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
434.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
433.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
430.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
429.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
428.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
426.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
426.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
419.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
418.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
416.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
406.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
401.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
400.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
400.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
398.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
394.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
393.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
391.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
388.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
385.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
372.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
372.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
370.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
370.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
369.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
365.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
360.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
351.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
331.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
320.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
316.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
292.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
261.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
221.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPIB is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
660.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
1542.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1535.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
1513.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1433.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1366.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
1314.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
1293.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1271.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1215.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
1140.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1106.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
1090.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
1084.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
1075.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
1070.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
1053.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
1046.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1035.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
1024.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
1017.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1009.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1003.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
1002.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
1000.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
1000.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
997.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
988.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
967.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
966.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
955.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
950.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
948.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
946.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
941.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
938.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
934.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
933.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
907.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
904.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
904.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
900.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
897.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
895.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
879.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
875.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
875.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
867.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
854.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
845.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
842.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
841.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
839.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
839.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
838.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
837.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
826.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
822.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
821.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
820.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
820.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
813.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
807.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
802.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
797.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
794.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
794.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
793.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
788.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
785.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
779.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
777.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
776.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
775.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
775.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
773.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
766.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
762.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
761.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
755.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
752.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
749.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
745.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
744.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
743.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
741.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
740.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
738.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
738.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
737.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
736.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
735.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
730.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
726.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
723.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
723.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
723.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
719.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
716.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
715.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
709.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
709.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
707.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
705.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
698.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
696.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
695.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
695.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
694.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
694.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
692.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
689.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
688.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
687.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
683.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
680.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
679.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
679.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
677.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
675.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
675.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
664.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
664.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
662.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
657.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
657.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
654.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
651.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
645.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
642.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
640.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
636.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
634.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
633.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
633.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
632.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
632.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
631.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
628.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
627.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
625.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
622.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
621.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
619.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
619.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
618.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
615.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
615.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
614.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
612.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
611.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
610.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
608.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
608.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
607.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
602.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
597.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
597.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
593.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
592.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
592.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
592.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
588.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
588.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
582.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
579.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
579.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
574.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
573.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
571.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
569.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
567.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
566.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
566.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
562.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
560.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
559.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
558.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
558.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
557.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
556.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
556.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
554.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
554.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
551.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
545.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
545.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
543.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
543.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
537.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
536.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
534.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
533.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
533.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
532.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
530.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
528.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
525.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
518.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
517.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
517.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
517.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
515.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
512.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
510.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
508.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
506.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
505.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
505.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
505.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
497.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
497.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
497.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
493.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
491.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
489.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
487.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
486.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
484.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
484.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
478.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
478.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
478.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
475.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
474.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
472.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
471.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
471.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
468.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
464.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
463.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
459.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
459.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
458.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
452.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
452.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
445.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
440.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
439.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
438.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
437.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
436.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
435.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
429.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
426.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
423.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
418.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
418.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
417.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
417.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
414.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
414.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
403.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
402.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
397.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
397.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
389.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
385.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
383.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
381.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
381.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
378.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
377.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
376.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
375.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
360.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
355.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
340.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
339.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
336.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
330.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
328.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
327.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
326.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
325.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
324.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
319.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
311.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
306.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
299.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
284.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
281.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
279.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0025110003
Tumor
1.3
CPT0012180003
Tumor
1.2
CPT0088550004
Tumor
1.2
CPT0001340003
Tumor
1.1
CPT0002350011
Tumor
0.9
CPT0001180009
Tumor
0.8
CPT0079270003
Tumor
0.8
CPT0011410003
Tumor
0.7
CPT0084560003
Tumor
0.6
CPT0001260009
Tumor
0.6
CPT0014450004
Tumor
0.5
CPT0069160003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0078800003
Tumor
0.4
CPT0084590001
Normal
0.4
CPT0076330003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0075560003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0010110003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0088480003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0092730003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0075170001
Normal
0.1
CPT0088630003
Tumor
0.1
CPT0077110003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0082010001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0088570001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0009080003
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0006530001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0012770003
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0015810003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0000870016
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0079230003
Tumor
-0.2
CPT0079000001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0014160003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0001220008
Tumor
-0.3
CPT0065450001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0006630003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0088920001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0079300001
Normal
-0.3
CPT0001500009
Tumor
-0.3
CPT0001350001
Normal
-0.3
CPT0088970003
Tumor
-0.3
CPT0063330001
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0010160003
Tumor
-0.4
CPT0007870001
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0000780007
Tumor
-0.4
CPT0001550001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0026420001
Normal
-0.4
CPT0078530001
Normal
-0.4
CPT0079180003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
