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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPIB is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
933.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2892.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
2240.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
2237.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2186.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1996.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
1952.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
1894.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1886.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
1875.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1858.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1856.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1826.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1772.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1742.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
1735.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1707.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1686.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1641.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1629.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1628.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1616.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1559.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1549.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
1519.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
1516.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1506.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1506.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
1486.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1476.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1462.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1458.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1448.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1433.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1430.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
1425.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1420.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1388.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
1379.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1377.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1376.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1370.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1367.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1365.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
1359.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1334.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
1331.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1331.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1328.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
1326.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1319.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1291.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1291.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1286.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1283.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1262.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
1258.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1254.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1252.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1241.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1241.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1239.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1237.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1236.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
1231.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1224.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1222.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1211.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1210.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1208.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1205.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1202.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1199.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1194.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
1194.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
1189.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1182.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1174.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1168.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1167.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1167.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
1159.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1157.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
1151.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1146.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1145.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1133.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1131.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1131.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1124.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1119.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1111.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1110.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1109.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1104.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1103.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1101.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1096.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1094.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1086.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1085.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1081.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1080.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1079.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1078.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1077.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1069.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1069.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1064.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1062.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1060.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1052.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1052.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1051.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1048.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
1048.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1047.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1046.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
1045.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1045.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1037.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1036.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1033.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
1031.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1029.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1025.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1025.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
1021.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
1018.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
1017.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1017.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1016.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1014.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1010.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1008.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1006.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1000.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
996.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
996.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
994.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
990.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
990.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
987.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
983.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
980.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
980.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
972.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
968.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
960.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
959.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
956.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
955.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
955.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
949.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
948.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
948.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
944.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
936.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
934.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
928.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
924.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
916.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
914.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
910.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
904.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
902.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
901.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
901.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
897.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
897.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
895.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
888.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
885.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
884.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
883.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
880.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
878.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
877.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
875.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
874.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
874.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
872.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
867.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
866.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
866.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
866.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
865.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
861.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
860.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
860.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
859.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
859.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
854.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
854.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
854.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
853.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
852.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
848.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
845.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
841.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
839.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
837.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
836.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
830.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
830.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
830.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
830.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
829.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
829.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
826.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
822.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
821.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
815.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
814.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
804.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
793.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
793.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
788.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
788.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
783.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
781.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
781.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
780.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
779.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
778.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
777.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
774.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
772.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
771.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
770.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
770.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
768.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
762.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
762.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
762.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
760.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
757.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
755.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
753.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
753.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
753.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
748.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
747.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
745.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
745.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
743.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
732.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
729.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
722.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
720.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
720.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
720.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
719.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
717.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
715.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
710.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
708.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
707.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
707.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
707.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
706.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
704.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
702.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
702.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
699.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
698.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
697.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
697.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
695.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
694.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
692.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
691.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
689.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
682.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
678.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
678.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
675.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
665.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
663.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
661.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
659.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
659.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
657.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
653.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
652.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
649.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
646.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
646.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
636.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
635.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
613.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
611.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
606.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
601.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
600.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
594.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
593.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
589.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
587.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
583.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
580.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
578.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
578.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
576.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
574.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
573.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
572.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
568.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
565.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
563.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
560.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
557.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
555.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
549.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
548.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
547.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
545.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
543.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
538.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
536.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
535.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
535.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
527.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
510.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
504.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
502.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
501.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
501.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
500.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
497.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
495.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
493.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
491.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
490.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
486.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
476.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
475.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
473.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
468.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
457.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
453.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
452.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
440.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
439.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
436.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
431.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
431.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
425.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
425.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
424.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
423.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
415.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
410.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
403.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
396.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
392.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
389.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
386.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
384.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
358.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
344.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
285.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPIB is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
620.3
Number of samples
231
Samples
Sample
Description
TPM
DO48682
0 years, female, NA, stage:3, dead, 120 days
1673.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
1598.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1497.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
1430.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
1238.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
1199.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
1192.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
1166.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
1130.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
1127.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
1105.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1103.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
1096.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
1070.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
1065.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
1065.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
1065.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
1065.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
1026.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1018.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
1009.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
1009.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
986.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
979.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
973.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
952.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
947.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
946.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
942.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
939.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
921.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
919.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
897.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
895.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
886.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
875.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
874.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
874.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
859.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
839.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
834.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
832.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
831.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
829.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
826.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
814.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
811.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
803.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
803.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
797.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
797.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
795.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
794.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
793.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
792.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
785.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
777.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
776.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
775.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
740.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
735.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
726.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
725.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
721.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
721.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
717.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
711.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
703.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
702.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
699.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
698.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
695.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
688.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
687.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
682.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
676.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
674.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
674.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
669.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
667.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
663.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
661.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
660.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
659.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
658.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
656.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
654.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
648.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
648.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
646.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
646.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
642.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
641.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
637.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
633.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
627.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
616.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
615.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
614.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
608.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
602.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
602.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
600.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
598.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
597.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
593.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
586.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
585.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
582.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
578.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
572.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
570.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
570.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
570.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
570.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
569.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
566.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
566.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
564.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
557.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
557.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
554.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
550.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
549.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
542.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
541.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
538.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
531.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
530.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
528.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
528.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
525.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
522.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
522.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
520.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
520.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
519.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
515.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
510.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
510.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
509.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
504.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
503.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
503.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
499.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
497.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
496.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
496.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
495.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
491.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
489.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
484.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
483.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
483.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
482.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
477.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
477.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
476.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
475.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
475.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
470.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
469.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
467.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
464.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
464.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
461.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
460.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
459.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
459.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
456.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
456.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
452.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
452.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
439.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
435.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
434.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
430.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
426.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
423.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
422.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
419.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
412.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
409.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
406.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
403.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
401.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
399.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
399.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
394.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
394.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
394.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
382.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
373.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
373.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
367.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
366.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
364.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
360.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
359.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
355.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
353.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
350.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
342.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
339.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
337.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
335.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
334.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
331.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
330.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
326.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
324.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
324.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
323.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
321.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
313.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
310.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
310.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
308.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
306.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
285.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
278.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
277.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
276.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
263.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
253.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
245.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
234.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
229.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
229.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
227.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
194.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
227
Tumor
1.3
445
Tumor
1.0
615
Tumor
1.0
857
Tumor
0.9
357
Tumor
0.8
527
Tumor
0.8
387
Tumor
0.8
467
Tumor
0.7
745
Tumor
0.7
777
Tumor
0.6
813
Tumor
0.6
727
Tumor
0.6
1027
Tumor
0.6
135
Tumor
0.5
435
Tumor
0.5
1021
Tumor
0.5
713
Tumor
0.5
481
Tumor
0.4
1044
Normal
0.4
661
Tumor
0.4
955
Tumor
0.4
137
Tumor
0.4
363
Tumor
0.4
523
Tumor
0.4
1014
Normal
0.4
285
Tumor
0.4
937
Tumor
0.3
863
Tumor
0.3
517
Tumor
0.3
866
Normal
0.3
1015
Tumor
0.3
851
Tumor
0.3
878
Normal
0.3
1043
Tumor
0.3
636
Normal
0.3
743
Tumor
0.3
923
Tumor
0.3
195
Tumor
0.3
778
Normal
0.3
922
Normal
0.3
816
Normal
0.3
286
Normal
0.3
514
Normal
0.3
392
Normal
0.3
314
Normal
0.3
984
Normal
0.3
331
Tumor
0.3
411
Tumor
0.2
696
Normal
0.2
814
Normal
0.2
447
Tumor
0.2
443
Tumor
0.2
385
Tumor
0.2
648
Normal
0.2
376
Normal
0.2
232
Normal
0.2
635
Tumor
0.2
526
Normal
0.2
554
Normal
0.2
978
Normal
0.2
572
Normal
0.2
944
Normal
0.2
785
Tumor
0.2
571
Tumor
0.2
412
Normal
0.2
918
Normal
0.2
212
Normal
0.2
1016
Normal
0.2
938
Normal
0.2
1032
Normal
0.2
528
Normal
0.2
1022
Normal
0.2
524
Normal
0.2
916
Normal
0.2
926
Normal
0.2
746
Normal
0.2
1028
Normal
0.2
755
Tumor
0.2
824
Normal
0.2
368
Normal
0.2
431
Tumor
0.2
468
Normal
0.2
818
Normal
0.2
1026
Normal
0.2
518
Normal
0.2
466
Normal
0.2
873
Tumor
0.2
426
Normal
0.2
536
Normal
0.2
228
Normal
0.2
332
Normal
0.2
912
Normal
0.2
697
Tumor
0.2
662
Normal
0.2
852
Normal
0.1
534
Normal
0.1
148
Normal
0.1
982
Normal
0.1
284
Normal
0.1
414
Normal
0.1
963
Tumor
0.1
744
Normal
0.1
952
Normal
0.1
446
Normal
0.1
494
Normal
0.1
568
Normal
0.1
686
Normal
0.1
354
Normal
0.1
261
Tumor
0.1
433
Tumor
0.1
738
Normal
0.1
1042
Normal
0.1
698
Normal
0.1
627
Tumor
0.1
915
Tumor
0.1
1046
Normal
0.1
557
Tumor
0.1
492
Normal
0.1
672
Normal
0.1
983
Tumor
0.1
452
Normal
0.1
257
Tumor
0.1
756
Normal
0.1
564
Normal
0.1
742
Normal
0.1
367
Tumor
0.1
353
Tumor
0.1
1025
Tumor
0.1
142
Normal
0.1
364
Normal
0.1
714
Normal
0.1
488
Normal
0.1
358
Normal
0.1
436
Normal
0.1
546
Normal
0.1
356
Normal
0.1
484
Normal
0.1
864
Normal
0.1
968
Normal
0.1
448
Normal
0.1
815
Tumor
0.1
858
Normal
0.1
642
Normal
0.1
862
Normal
0.1
925
Tumor
0.1
558
Normal
0.1
432
Normal
0.1
352
Normal
0.1
924
Normal
0.1
131
Tumor
0.1
884
Normal
0.1
196
Normal
0.1
867
Tumor
0.1
444
Normal
0.1
882
Normal
0.1
723
Tumor
0.1
478
Normal
0.1
728
Normal
0.1
111
Normal
0.0
187
Tumor
0.0
953
Tumor
0.0
616
Normal
0.0
954
Normal
0.0
262
Normal
0.0
394
Normal
0.0
474
Normal
0.0
628
Normal
0.0
365
Tumor
0.0
482
Normal
0.0
424
Normal
0.0
563
Tumor
0.0
722
Normal
0.0
976
Normal
0.0
498
Normal
0.0
268
Normal
0.0
272
Normal
0.0
185
Tumor
0.0
258
Normal
0.0
664
Normal
0.0
981
Tumor
0.0
666
Normal
0.0
737
Tumor
0.0
958
Normal
0.0
538
Normal
0.0
516
Normal
0.0
172
Normal
0.0
874
Normal
0.0
328
Normal
0.0
422
Normal
0.0
868
Normal
0.0
113
Tumor
0.0
515
Tumor
0.0
956
Normal
0.0
327
Tumor
0.0
384
Normal
0.0
132
Normal
0.0
911
Tumor
0.0
393
Tumor
0.0
186
Normal
0.0
464
Normal
0.0
188
Normal
0.0
298
Normal
0.0
721
Tumor
0.0
574
Normal
0.0
477
Tumor
0.0
162
Normal
0.0
513
Tumor
0.0
342
Normal
0.0
161
Tumor
0.0
128
Normal
0.0
434
Normal
0.0
312
Normal
0.0
388
Normal
0.0
138
Normal
0.0
171
Tumor
0.0
914
Normal
0.0
114
Normal
0.0
741
Tumor
-0.1
472
Normal
-0.1
716
Normal
-0.1
964
Normal
-0.1
975
Tumor
-0.1
362
Normal
-0.1
573
Tumor
-0.1
341
Tumor
-0.1
966
Normal
-0.1
917
Tumor
-0.1
218
Normal
-0.1
361
Tumor
-0.1
222
Normal
-0.1
278
Normal
-0.1
214
Normal
-0.1
421
Tumor
-0.1
553
Tumor
-0.1
618
Normal
-0.1
396
Normal
-0.1
124
Normal
-0.1
423
Tumor
-0.1
136
Normal
-0.1
277
Tumor
-0.1
386
Normal
-0.1
461
Tumor
-0.1
913
Tumor
-0.1
217
Tumor
-0.1
455
Tumor
-0.1
343
Tumor
-0.1
344
Normal
-0.1
416
Normal
-0.1
355
Tumor
-0.1
1045
Tumor
-0.1
112
Tumor
-0.1
146
Normal
-0.1
191
Tumor
-0.2
383
Tumor
-0.2
127
Tumor
-0.2
957
Tumor
-0.2
428
Normal
-0.2
545
Tumor
-0.2
823
Tumor
-0.2
147
Tumor
-0.2
881
Tumor
-0.2
695
Tumor
-0.2
415
Tumor
-0.2
456
Normal
-0.2
126
Normal
-0.2
1031
Tumor
-0.2
663
Tumor
-0.2
471
Tumor
-0.2
366
Normal
-0.2
223
Tumor
-0.2
224
Normal
-0.2
883
Tumor
-0.2
567
Tumor
-0.2
525
Tumor
-0.2
877
Tumor
-0.2
533
Tumor
-0.2
313
Tumor
-0.2
297
Tumor
-0.2
271
Tumor
-0.2
311
Tumor
-0.2
483
Tumor
-0.2
213
Tumor
-0.2
861
Tumor
-0.2
395
Tumor
-0.3
951
Tumor
-0.3
351
Tumor
-0.3
413
Tumor
-0.3
473
Tumor
-0.3
1041
Tumor
-0.3
817
Tumor
-0.3
145
Tumor
-0.3
231
Tumor
-0.3
375
Tumor
-0.3
211
Tumor
-0.3
283
Tumor
-0.3
535
Tumor
-0.3
192
Normal
-0.3
451
Tumor
-0.3
463
Tumor
-0.3
391
Tumor
-0.3
497
Tumor
-0.3
267
Tumor
-0.3
462
Normal
-0.3
965
Tumor
-0.3
141
Tumor
-0.3
977
Tumor
-0.3
427
Tumor
-0.4
493
Tumor
-0.4
786
Normal
-0.4
943
Tumor
-0.4
1013
Tumor
-0.4
487
Tumor
-0.4
425
Tumor
-0.4
665
Tumor
-0.4
537
Tumor
-0.5
617
Tumor
-0.5
715
Tumor
-0.5
724
Normal
-0.5
921
Tumor
-0.5
671
Tumor
-0.5
221
Tumor
-0.5
685
Tumor
-0.5
491
Tumor
-0.6
641
Tumor
-0.6
865
Tumor
-0.6
967
Tumor
-0.7
123
Tumor
-0.7
647
Tumor
-0.8
125
Tumor
-0.8
465
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.