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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
146.4
nTPM
HPA Brain:
76.1
nTPM
GTEx:
146.4
nTPM
FANTOM5:
76.7
Scaled Tags Per Million
Pig:
48.4
nTPM
Mouse:
23.4
nTPM
Allen mouse:
1.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
76.1
Sample id
Sample description
nTPM
Amygdala nTPM: 76.1
2514
Male, age 75, right hemisphere
83.1
2695
Female, age 67, right hemisphere
81.1
1987
Female, age 91, left hemisphere
73.3
2814
Male, age 76, right hemisphere
71.9
2517
Female, age 94, left hemisphere
70.9
Basal amygdala nTPM: 62.6
2110
Male, age 80, left hemisphere
71.6
2609
Male, age 75, right hemisphere
70.1
1955
Male, age 76, both hemispheres
67.8
2685
Female, age 94, left hemisphere
59.7
2243
Female, age 91, right hemisphere
58.3
2827
Female, age 67, right hemisphere
48.1
Central amygdala nTPM: 67.6
2826
Female, age 94, left hemisphere
74.4
2515
Male, age 75, right hemisphere
72.4
1905
Male, age 76, both hemispheres
71.5
2239
Male, age 80, left hemisphere
67.4
2701
Female, age 91, right hemisphere
52.3
Corticomedial amygdala nTPM: 63.6
2428
Male, age 75, right hemisphere
74.1
2829
Male, age 80, left hemisphere
71.1
2240
Male, age 76, both hemispheres
64.4
2429
Female, age 94, left hemisphere
63.6
2242
Female, age 91, right hemisphere
57.9
2535
Female, age 67, right hemisphere
50.6
Lateral amygdala nTPM: 67.6
2534
Female, age 94, left hemisphere
79.1
2516
Male, age 75, right hemisphere
76.3
1883
Male, age 76, both hemispheres
68.4
2830
Female, age 67, right hemisphere
64.8
2256
Male, age 80, left hemisphere
63.3
2255
Female, age 91, right hemisphere
53.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
146.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 146.4
Samples: 152
Max nTPM: 335.0
Min nTPM: 81.9
Std nTPM: 42.6
Median nTPM: 140.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
335.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
331.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
289.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
289.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
277.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
276.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
271.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
236.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
216.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
212.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
206.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
202.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
198.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
196.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
190.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
186.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
183.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
182.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
180.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
175.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
175.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
171.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
170.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
169.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
169.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
169.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
164.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
164.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
164.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
163.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
163.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
162.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
161.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
159.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
159.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
157.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
155.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
155.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
155.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
155.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
155.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
154.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
154.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
154.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
152.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
151.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
150.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
150.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
150.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
150.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
150.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
149.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
149.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
148.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
147.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
147.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
147.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
146.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
146.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
146.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
146.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
145.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
144.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
144.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
143.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
143.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
143.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
143.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
143.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
142.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
142.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
142.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
141.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
141.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
140.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
140.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
140.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
140.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
138.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
138.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
138.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
137.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
136.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
136.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
135.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
135.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
135.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
134.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
134.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
132.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
132.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
132.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
131.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
131.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
131.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
130.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
130.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
129.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
128.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
128.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
128.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
128.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
127.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
124.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
124.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
124.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
123.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
123.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
122.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
122.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
122.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
121.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
121.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
121.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
121.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
120.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
120.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
120.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
119.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
119.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
119.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
118.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
118.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
116.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
116.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
116.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
115.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
115.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
114.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
112.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
112.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
111.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
110.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
109.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
109.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
109.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
107.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
107.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
107.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
103.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
100.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
100.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
100.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
98.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
96.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
94.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
94.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
92.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
91.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
88.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
88.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
81.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
23.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 23.4
Samples: 4
Max nTPM: 26.7
Min nTPM: 20.2
Sample A
Male
20.2
Sample B
Male
21.6
Sample C
Female
26.7
Sample D
Female
25.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.