We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
98.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
90.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
84.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
82.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
81.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
74.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
74.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
70.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
65.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
64.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
62.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
62.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
59.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
58.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
57.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
57.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
56.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
56.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
56.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
55.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
53.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
52.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
51.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
51.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
50.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
49.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
48.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
47.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
47.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
45.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
45.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
44.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
44.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
44.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
43.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
43.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
41.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
39.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
36.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
36.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
34.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
33.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
33.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
32.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
31.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
26.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
24.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
24.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
23.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
22.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
22.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
21.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
21.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
20.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
18.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
16.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
13.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
13.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
13.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
11.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
4.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
155.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
153.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
125.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
123.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
113.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
109.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
107.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
107.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
104.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
103.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
101.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
100.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
97.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
96.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
94.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
94.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
93.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
92.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
92.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
92.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
91.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
91.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
90.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
89.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
85.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
83.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
82.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
82.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
81.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
80.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
79.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
79.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
79.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
78.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
78.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
77.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
76.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
76.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
76.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
75.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
74.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
74.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
73.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
73.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
73.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
73.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
73.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
72.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
72.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
72.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
72.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
72.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
71.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
71.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
70.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
70.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
70.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
69.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
69.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
69.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
69.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
69.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
69.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
68.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
68.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
67.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
67.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
66.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
66.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
66.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
66.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
65.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
65.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
65.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
65.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
65.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
65.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
65.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
64.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
64.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
63.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
63.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
63.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
63.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
63.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
63.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
63.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
63.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
63.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
62.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
62.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
62.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
61.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
61.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
61.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
61.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
61.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
61.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
61.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
60.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
60.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
60.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
60.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
60.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
60.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
60.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
60.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
60.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
59.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
59.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
59.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
59.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
59.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
58.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
58.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
58.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
58.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
58.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
58.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
57.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
57.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
57.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
57.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
57.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
57.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
57.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
57.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
57.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
57.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
57.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
57.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
57.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
57.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
56.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
56.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
56.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
56.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
56.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
56.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
56.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
56.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
56.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
55.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
55.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
55.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
55.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
55.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
55.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
55.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
55.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
55.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
55.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
54.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
54.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
54.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
54.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
54.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
54.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
54.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
54.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
53.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
53.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
53.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
53.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
53.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
53.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
53.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
53.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
53.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
52.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
52.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
52.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
52.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
52.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
52.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
52.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
52.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
52.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
52.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
52.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
52.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
52.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
52.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
51.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
51.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
51.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
51.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
51.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
51.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
51.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
51.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
51.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
51.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
51.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
51.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
51.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
51.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
51.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
50.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
50.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
50.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
50.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
50.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
50.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
50.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
50.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
49.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
49.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
49.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
49.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
49.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
49.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
49.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
49.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
49.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
49.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
49.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
49.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
49.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
49.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
49.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
49.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
49.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
48.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
48.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
48.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
48.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
48.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
48.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
48.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
48.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
48.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
48.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
48.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
48.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
48.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
47.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
47.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
47.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
47.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
47.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
47.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
47.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
47.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
47.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
47.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
47.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
47.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
47.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
46.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
46.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
46.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
46.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
46.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
46.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
46.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
46.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
46.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
46.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
46.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
46.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
46.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
46.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
46.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
46.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
46.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
46.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
45.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
45.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
45.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
45.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
45.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
45.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
45.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
44.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
44.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
44.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
44.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
44.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
44.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
44.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
44.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
44.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
44.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
44.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
44.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
44.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
44.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
44.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
43.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
43.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
43.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
43.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
43.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
43.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
43.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
43.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
43.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
43.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
43.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
42.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
42.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
42.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
42.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
42.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
42.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
42.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
42.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
42.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
42.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
42.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
41.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
41.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
41.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
41.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
41.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
41.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
41.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
41.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
41.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
40.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
40.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
40.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
40.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
40.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
40.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
40.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
40.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
40.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
40.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
40.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
40.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
40.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
40.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
40.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
39.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
39.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
39.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
39.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
39.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
39.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
39.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
39.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
38.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
38.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
38.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
38.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
38.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
38.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
38.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
38.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
38.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
37.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
37.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
37.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
37.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
37.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
37.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
37.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
37.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
37.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
37.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
37.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
36.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
36.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
36.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
36.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
36.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
36.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
36.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
36.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
36.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
35.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
35.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
35.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
35.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
35.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
35.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
35.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
35.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
35.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
35.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
35.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
35.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
35.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
35.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
35.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
34.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
34.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
34.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
34.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
34.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
34.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
34.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
34.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
34.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
34.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
34.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
34.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
34.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
34.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
33.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
33.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
33.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
33.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
33.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
33.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
33.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
33.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
33.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
33.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
33.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
33.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
33.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
33.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
32.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
32.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
32.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
32.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
32.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
32.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
31.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
31.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
31.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
31.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
31.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
31.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
31.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
31.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
31.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
31.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
31.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
31.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
31.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
31.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
31.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
31.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
30.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
30.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
30.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
30.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
30.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
29.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
29.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
29.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
29.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
29.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
29.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
29.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
29.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
29.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
29.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
28.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
28.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
28.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
28.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
28.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
28.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
28.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
28.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
27.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
27.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
27.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
27.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
27.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
26.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
26.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
26.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
26.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
26.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
26.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
25.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
25.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
24.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
24.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
24.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
24.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
23.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
23.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
23.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
23.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
23.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
22.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
22.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
22.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
22.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
22.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
21.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
21.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
21.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
20.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
20.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
20.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
20.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
19.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
19.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
17.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
17.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
16.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
16.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
13.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
10.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED3 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
132.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
95.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
90.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
89.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
89.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
87.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
86.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
85.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
85.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
82.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
81.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
77.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
74.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
69.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
68.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
68.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
67.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
66.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
65.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
65.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
64.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
62.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
61.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
60.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
60.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
60.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
59.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
59.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
58.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
57.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
56.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
56.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
56.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
56.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
56.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
56.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
53.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
53.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
52.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
52.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
51.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
51.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
50.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
50.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
50.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
50.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
49.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
49.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
48.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
48.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
47.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
47.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
47.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
46.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
46.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
46.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
45.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
45.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
44.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
43.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
43.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
43.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
43.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
43.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
42.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
42.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
42.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
42.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
42.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
41.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
41.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
41.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
41.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
40.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
39.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
38.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
38.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
38.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
38.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
37.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
37.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
36.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
35.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
34.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
34.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
34.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
33.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
32.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
31.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
30.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
28.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
26.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
24.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
22.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
173.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
170.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
169.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
156.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
150.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
136.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
134.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
133.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
117.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
113.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
112.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
111.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
100.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
99.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
98.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
98.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
97.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
95.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
92.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
91.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
89.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
88.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
87.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
86.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
86.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
85.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
85.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
84.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
83.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
83.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
82.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
82.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
81.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
79.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
79.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
79.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
79.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
79.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
78.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
77.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
76.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
76.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
76.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
76.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
75.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
75.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
75.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
75.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
74.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
74.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
74.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
74.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
73.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
73.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
72.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
72.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
72.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
72.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
72.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
71.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
70.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
70.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
70.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
70.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
69.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
69.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
68.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
68.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
67.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
67.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
67.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
66.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
66.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
66.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
65.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
65.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
64.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
64.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
64.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
63.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
63.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
62.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
62.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
62.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
62.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
61.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
60.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
60.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
60.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
60.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
60.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
60.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
60.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
59.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
59.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
59.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
59.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
58.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
58.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
58.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
58.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
57.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
57.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
57.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
57.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
57.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
56.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
56.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
55.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
55.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
55.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
55.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
55.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
55.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
55.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
55.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
54.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
54.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
53.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
53.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
53.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
52.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
52.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
51.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
51.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
51.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
51.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
51.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
51.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
51.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
51.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
51.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
50.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
50.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
50.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
50.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
50.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
50.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
49.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
49.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
49.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
49.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
48.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
48.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
48.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
48.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
48.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
48.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
47.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
47.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
47.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
46.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
46.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
46.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
45.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
45.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
45.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
45.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
45.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
44.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
44.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
44.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
44.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
44.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
44.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
44.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
44.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
44.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
44.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
43.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
43.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
43.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
43.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
43.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
43.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
42.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
42.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
42.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
41.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
41.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
41.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
41.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
41.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
41.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
41.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
40.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
40.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
40.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
40.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
40.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
40.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
40.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
40.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
40.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
39.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
39.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
39.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
39.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
39.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
39.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
38.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
38.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
38.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
38.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
38.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
38.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
38.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
37.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
37.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
37.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
37.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
36.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
36.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
36.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
36.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
36.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
36.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
35.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
35.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
35.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
35.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
35.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
34.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
34.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
34.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
34.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
34.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
34.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
34.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
34.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
33.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
33.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
33.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
32.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
32.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
32.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
32.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
32.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
31.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
31.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
30.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
30.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
30.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
29.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
29.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
29.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
29.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
28.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
27.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
27.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
27.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
27.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
25.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
25.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
25.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
24.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
24.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
24.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
23.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
22.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
22.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
22.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
21.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
20.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
20.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
19.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
19.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
18.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
18.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
17.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
17.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
16.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
7.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
7.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
1.8
CPT0014450004
Tumor
1.7
CPT0001340003
Tumor
1.6
CPT0017850003
Tumor
1.6
CPT0012180003
Tumor
1.5
CPT0076330003
Tumor
1.3
CPT0065690003
Tumor
1.2
CPT0020120003
Tumor
1.1
CPT0064370003
Tumor
1.0
CPT0023350003
Tumor
0.9
CPT0084560003
Tumor
0.9
CPT0088480003
Tumor
0.9
CPT0012280003
Tumor
0.9
CPT0066480003
Tumor
0.8
CPT0077320001
Normal
0.8
CPT0079270003
Tumor
0.8
CPT0063630003
Tumor
0.7
CPT0012670003
Tumor
0.7
CPT0069160003
Tumor
0.7
CPT0079410003
Tumor
0.7
CPT0001260009
Tumor
0.6
CPT0025230003
Tumor
0.6
CPT0088690003
Tumor
0.6
CPT0092790003
Tumor
0.6
CPT0086950003
Tumor
0.6
CPT0078800003
Tumor
0.6
CPT0000640003
Tumor
0.6
CPT0023690003
Tumor
0.6
CPT0075560003
Tumor
0.5
CPT0078930003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0079180003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0069000003
Tumor
0.5
CPT0007860003
Tumor
0.5
CPT0006900003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0081880003
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0084590001
Normal
0.4
CPT0065750003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0025290003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0011410003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0000780007
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0088900003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0088630003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0079380003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0009060003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0089480003
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0019990003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0078830003
Tumor
-0.2
CPT0079230003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0026420001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0066470004
Tumor
-0.2
CPT0006530001
Normal
-0.2
CPT0088970003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0088500001
Normal
-0.3
CPT0069190001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0006630003
Tumor
-0.3
CPT0023710001
Normal
-0.3
CPT0075720003
Tumor
-0.3
CPT0019160001
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0025350003
Tumor
-0.3
CPT0066430001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0086870003
Tumor
-0.3
CPT0078840001
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0086830003
Normal
-0.4
CPT0089020003
Tumor
-0.4
CPT0088710001
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0017410003
Tumor
-0.4
CPT0092800003
Normal
-0.4
CPT0078660003
Tumor
-0.4
CPT0077500001
Normal
-0.4
CPT0006950001
Normal
-0.4
CPT0000660001
Normal
-0.4
CPT0013790003
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0002270011
Tumor
-0.4
CPT0001190001
Normal
-0.5
CPT0088780001
Normal
-0.5
CPT0079510001
Normal
-0.5
CPT0025610001
Normal
-0.5
CPT0000870016
Tumor
-0.5
CPT0087050003
Normal
-0.5
CPT0012920003
Normal
-0.5
CPT0017450001
Normal
-0.5
CPT0009080003
Normal
-0.5
CPT0069010001
Normal
-0.5
CPT0024680001
Normal
-0.5
CPT0076350001
Normal
-0.5
CPT0088920001
Normal
-0.5
CPT0007470001
Normal
-0.5
CPT0012090003
Normal
-0.5
CPT0079000001
Normal
-0.5
CPT0009020003
Normal
-0.5
CPT0007870001
Normal
-0.5
CPT0064400001
Normal
-0.6
CPT0025920001
Normal
-0.6
CPT0078530001
Normal
-0.6
CPT0086890003
Normal
-0.6
CPT0020130001
Normal
-0.6
CPT0010170001
Normal
-0.6
CPT0089040001
Normal
-0.6
CPT0012570003
Normal
-0.7
CPT0023360001
Normal
-0.7
CPT0075170001
Normal
-0.7
CPT0012770003
Normal
-0.7
CPT0001350001
Normal
-0.7
CPT0075570001
Normal
-0.8
CPT0078670001
Normal
-0.8
CPT0092740003
Normal
-0.9
CPT0006730001
Normal
-0.9
CPT0063640001
Normal
-0.9
CPT0000790001
Normal
-0.9
CPT0065450001
Normal
-1.0
CPT0078510003
Tumor
-1.1
CPT0079430001
Normal
-1.1
CPT0071150004
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0092290003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0001230001
Normal
N/A
CPT0001220008
Tumor
N/A
CPT0025060001
Normal
N/A
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
