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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SGPL1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
31.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
29.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
28.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
27.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
27.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
26.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
26.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
26.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
26.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
25.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
24.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
23.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
22.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
22.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
22.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
21.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
21.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
18.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
18.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
16.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
15.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
15.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
14.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
13.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
13.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
13.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
13.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
13.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
13.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
12.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
12.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
12.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
11.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
11.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
11.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
9.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
9.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
8.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
8.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
8.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
8.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SGPL1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
55.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
43.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
41.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
39.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
39.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
39.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
38.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
36.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
35.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
35.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
32.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
31.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
31.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
30.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
30.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
30.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
30.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
30.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
30.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
29.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
29.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
29.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
28.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
28.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
28.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
28.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
28.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
28.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
28.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
28.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
27.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
27.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
27.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
27.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
27.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
27.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
27.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
27.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
26.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
26.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
26.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
26.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
26.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
26.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
26.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
26.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
26.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
26.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
26.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
26.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
25.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
25.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
25.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
25.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
25.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
25.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
25.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
25.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
25.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
25.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
24.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
24.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
24.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
24.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
24.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
24.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
24.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
24.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
24.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
24.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
24.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
24.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
24.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
24.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
24.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
24.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
24.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
23.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
23.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
23.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
23.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
23.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
23.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
23.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
23.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
23.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
23.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
23.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
23.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
23.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
23.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
23.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
23.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
22.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
22.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
22.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
22.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
22.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
22.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
22.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
22.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
22.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
22.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
22.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
21.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
21.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
21.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
21.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
21.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
21.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
21.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
21.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
21.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
21.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
21.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
21.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
21.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
21.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
21.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
21.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
21.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
21.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
21.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
21.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
21.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
21.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
21.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
21.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
21.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
20.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
20.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
20.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
20.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
20.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
20.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
20.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
20.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
20.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
20.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
20.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
20.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
20.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
20.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
20.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
20.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
20.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
20.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
20.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
20.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
20.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
20.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
20.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
19.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
19.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
19.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
19.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
19.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
19.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
19.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
19.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
19.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
19.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
19.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
19.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
19.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
19.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
19.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
19.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
19.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
19.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
19.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
19.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
19.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
19.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
19.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
19.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
18.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
18.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
18.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
18.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
18.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
18.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
18.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
18.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
18.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
18.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
18.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
18.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
18.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
18.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
18.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
18.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
18.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
18.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
18.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
18.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
18.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
18.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
17.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
17.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
17.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
17.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
17.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
17.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
17.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
17.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
17.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
17.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
17.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
17.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
17.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
17.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
17.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
17.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
17.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
17.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
16.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
16.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
16.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
16.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
16.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
16.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
16.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
16.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
16.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
16.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
16.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
16.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
16.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
16.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
16.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
16.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
16.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
16.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
16.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
16.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
15.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
15.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
15.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
15.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
15.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
15.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
15.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
15.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
15.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
15.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
15.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
15.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
15.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
15.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
15.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
15.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
14.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
14.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
14.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
14.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
14.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
14.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
14.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
14.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
14.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
14.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
14.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
14.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
14.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
14.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
14.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
14.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
14.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
14.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
14.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
13.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
13.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
13.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
13.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
13.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
13.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
13.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
13.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
13.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
13.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
13.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
13.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
12.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
12.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
12.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
12.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
11.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
11.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
11.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
11.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
11.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
11.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
10.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
10.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
10.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
10.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
9.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
9.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
9.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
8.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
8.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
8.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
7.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
6.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
6.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SGPL1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
40.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
35.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
32.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
32.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
28.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
26.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
25.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
25.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
25.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
25.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
24.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
24.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
24.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
24.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
24.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
24.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
24.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
23.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
23.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
23.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
22.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
21.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
21.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
21.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
21.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
20.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
20.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
20.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
20.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
20.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
20.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
19.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
19.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
19.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
19.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
19.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
19.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
19.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
19.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
18.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
18.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
18.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
18.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
18.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
17.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
17.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
17.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
17.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
17.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
16.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
16.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
16.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
15.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
15.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
15.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
14.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
14.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
14.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
14.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
13.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
13.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
13.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
12.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
11.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
10.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
8.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SGPL1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
72.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
72.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
71.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
61.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
50.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
48.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
48.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
47.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
46.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
44.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
42.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
42.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
40.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
40.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
40.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
40.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
39.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
39.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
38.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
38.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
38.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
37.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
36.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
35.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
35.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
35.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
34.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
34.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
33.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
33.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
33.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
32.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
32.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
32.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
31.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
31.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
31.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
30.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
30.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
30.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
30.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
30.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
30.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
29.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
29.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
28.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
28.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
27.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
27.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
27.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
27.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
26.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
26.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
26.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
26.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
26.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
26.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
26.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
26.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
26.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
25.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
25.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
25.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
24.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
24.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
24.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
24.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
24.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
24.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
24.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
24.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
23.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
23.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
23.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
23.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
23.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
23.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
23.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
22.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
22.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
22.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
22.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
22.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
22.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
22.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
21.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
21.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
21.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
21.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
21.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
21.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
20.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
20.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
20.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
20.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
20.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
20.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
20.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
20.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
20.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
20.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
20.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
20.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
19.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
19.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
19.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
19.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
19.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
19.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
19.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
19.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
19.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
19.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
19.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
18.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
18.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
18.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
17.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
17.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
17.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
17.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
17.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
17.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
17.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
16.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
16.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
16.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
16.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
16.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
16.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
16.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
16.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
15.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
15.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
15.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
15.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
15.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
15.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
15.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
15.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
15.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
14.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
14.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
14.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
14.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
14.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
14.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
14.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
14.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
14.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
14.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
14.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
14.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
14.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
14.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
14.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
13.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
13.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
12.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
12.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
11.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
11.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
11.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
11.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
10.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
10.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
10.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
10.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
9.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
9.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
9.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
8.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
8.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
7.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
7.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.3
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
1.1
CPT0023350003
Tumor
0.9
CPT0012180003
Tumor
0.9
CPT0079270003
Tumor
0.8
CPT0081880003
Tumor
0.8
CPT0025110003
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0001260009
Tumor
0.7
CPT0078510003
Tumor
0.7
CPT0025290003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0078800003
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0086360003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0007320003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0025170003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0088630003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0089020003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0088920001
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0001270001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0010170001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0086830003
Normal
0.0
CPT0026420001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0001220008
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0085670003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0082010001
Normal
-0.2
CPT0017850003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0076330003
Tumor
-0.2
CPT0025060001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0065450001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0019160001
Normal
-0.2
CPT0014370004
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0065930003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0025920001
Normal
-0.2
CPT0084560003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0066520001
Normal
-0.3
CPT0026410003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0069010001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0075720003
Tumor
-0.3
CPT0079000001
Normal
-0.3
CPT0000870016
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0001540009
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0000780007
Tumor
-0.3
CPT0000640003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0075570001
Normal
-0.4
CPT0012370003
Tumor
-0.4
CPT0025610001
Normal
-0.4
CPT0024670003
Tumor
-0.4
CPT0012640003
Normal
-0.5
CPT0014470001
Normal
-0.5
CPT0018250001
Normal
-0.5
CPT0012570003
Normal
-0.5
CPT0012090003
Normal
-0.5
CPT0009020003
Normal
-0.6
CPT0077490003
Tumor
-0.6
CPT0017450001
Normal
-0.6
CPT0012920003
Normal
-0.7
CPT0012770003
Normal
-0.7
CPT0024680001
Normal
-0.8
CPT0009060003
Tumor
-0.9
CPT0079180003
Tumor
-0.9
CPT0012900004
Tumor
-0.9
CPT0009080003
Normal
-1.1
CPT0011240003
Tumor
-1.3
CPT0017410003
Tumor
-1.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
