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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
API5 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
98.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
88.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
77.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
74.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
72.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
69.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
68.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
67.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
66.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
64.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
63.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
61.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
60.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
59.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
59.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
56.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
54.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
51.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
48.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
47.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
46.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
45.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
44.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
43.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
43.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
42.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
42.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
41.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
41.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
40.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
39.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
39.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
37.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
37.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
35.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
33.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
32.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
31.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
31.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
29.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
28.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
27.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
26.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
26.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
25.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
24.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
24.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
21.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
21.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
20.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
20.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
19.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
19.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
17.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
17.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
16.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
16.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
13.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
13.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
12.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
API5 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
103.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
96.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
70.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
59.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
57.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
57.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
56.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
55.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
54.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
54.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
53.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
53.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
53.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
52.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
52.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
52.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
52.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
51.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
51.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
50.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
49.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
49.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
49.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
49.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
49.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
49.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
48.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
48.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
48.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
48.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
48.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
48.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
47.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
47.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
47.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
46.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
46.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
46.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
46.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
46.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
46.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
46.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
46.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
46.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
46.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
46.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
45.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
45.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
45.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
45.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
45.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
45.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
45.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
45.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
45.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
45.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
44.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
44.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
44.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
44.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
44.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
44.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
44.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
44.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
44.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
44.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
44.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
43.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
43.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
43.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
43.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
43.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
43.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
43.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
43.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
43.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
43.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
43.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
43.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
43.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
42.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
42.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
42.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
42.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
42.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
42.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
42.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
42.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
41.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
41.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
41.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
41.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
41.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
41.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
41.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
40.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
40.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
40.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
40.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
40.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
40.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
40.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
40.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
40.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
40.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
40.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
39.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
39.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
39.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
39.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
39.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
39.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
39.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
39.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
39.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
39.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
39.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
39.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
39.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
39.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
38.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
38.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
38.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
38.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
38.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
38.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
38.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
38.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
38.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
38.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
38.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
38.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
38.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
38.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
38.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
38.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
38.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
38.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
38.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
38.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
38.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
38.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
38.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
38.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
38.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
38.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
37.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
37.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
37.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
37.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
37.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
37.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
37.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
37.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
37.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
37.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
37.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
37.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
37.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
36.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
36.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
36.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
36.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
36.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
36.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
36.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
36.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
36.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
36.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
36.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
36.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
36.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
36.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
36.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
36.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
36.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
36.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
35.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
35.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
35.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
35.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
35.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
35.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
35.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
35.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
35.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
35.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
35.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
35.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
35.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
35.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
35.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
34.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
34.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
34.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
34.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
34.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
34.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
34.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
34.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
34.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
34.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
34.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
34.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
34.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
34.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
34.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
34.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
34.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
33.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
33.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
33.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
33.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
33.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
33.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
33.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
33.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
33.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
33.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
33.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
33.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
33.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
33.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
33.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
33.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
33.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
32.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
32.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
32.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
32.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
32.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
32.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
32.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
32.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
32.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
32.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
32.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
32.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
32.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
32.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
31.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
31.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
31.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
31.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
31.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
31.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
31.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
31.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
31.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
31.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
31.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
30.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
30.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
30.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
30.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
30.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
30.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
30.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
30.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
30.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
30.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
30.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
30.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
30.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
30.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
30.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
30.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
30.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
30.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
29.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
29.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
29.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
29.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
29.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
29.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
29.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
29.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
29.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
29.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
29.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
29.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
29.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
29.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
29.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
29.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
29.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
29.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
29.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
28.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
28.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
28.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
28.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
28.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
28.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
28.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
28.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
28.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
28.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
28.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
28.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
28.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
27.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
27.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
27.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
27.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
27.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
27.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
27.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
27.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
27.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
27.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
27.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
26.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
26.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
26.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
26.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
26.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
26.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
26.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
26.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
26.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
26.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
26.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
26.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
26.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
26.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
26.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
26.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
26.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
26.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
26.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
26.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
26.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
26.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
26.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
25.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
25.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
25.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
25.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
25.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
25.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
24.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
24.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
24.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
24.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
24.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
24.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
24.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
24.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
24.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
24.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
24.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
24.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
24.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
24.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
24.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
23.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
23.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
23.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
23.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
23.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
23.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
23.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
23.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
22.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
22.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
22.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
22.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
22.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
22.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
22.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
22.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
22.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
22.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
22.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
21.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
21.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
21.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
21.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
21.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
21.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
21.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
21.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
21.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
21.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
20.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
20.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
20.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
20.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
20.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
20.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
20.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
19.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
19.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
19.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
19.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
19.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
19.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
19.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
19.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
19.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
19.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
19.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
19.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
18.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
18.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
18.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
18.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
18.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
18.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
18.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
17.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
17.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
17.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
17.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
17.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
17.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
17.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
17.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
17.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
17.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
17.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
17.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
16.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
16.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
16.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
16.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
16.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
15.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
15.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
15.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
14.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
14.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
14.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
13.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
13.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
12.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
9.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
API5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
68.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
67.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
64.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
58.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
57.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
57.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
56.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
55.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
55.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
55.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
54.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
54.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
53.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
53.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
52.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
52.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
52.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
52.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
51.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
51.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
51.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
51.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
49.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
49.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
48.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
48.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
48.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
47.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
46.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
46.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
46.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
45.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
45.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
45.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
45.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
45.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
44.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
44.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
43.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
43.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
43.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
43.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
43.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
42.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
41.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
41.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
41.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
41.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
40.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
40.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
39.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
39.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
38.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
38.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
37.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
37.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
36.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
36.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
36.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
35.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
35.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
35.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
34.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
34.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
33.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
33.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
33.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
33.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
32.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
32.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
32.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
32.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
31.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
31.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
30.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
29.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
29.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
28.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
27.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
26.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
26.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
26.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
26.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
23.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
23.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
22.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
22.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
20.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
15.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
API5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
110.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
108.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
81.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
77.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
75.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
70.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
67.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
66.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
66.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
66.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
64.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
64.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
63.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
62.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
62.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
61.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
61.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
61.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
59.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
59.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
59.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
58.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
58.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
57.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
56.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
56.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
55.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
55.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
55.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
54.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
54.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
53.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
53.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
53.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
53.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
53.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
52.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
51.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
51.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
51.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
50.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
50.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
49.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
47.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
47.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
46.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
45.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
44.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
44.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
44.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
44.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
43.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
43.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
43.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
43.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
42.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
42.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
42.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
42.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
41.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
40.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
40.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
40.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
40.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
40.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
39.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
39.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
39.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
39.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
39.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
39.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
38.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
38.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
37.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
37.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
37.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
37.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
37.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
37.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
36.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
36.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
35.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
35.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
35.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
35.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
35.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
35.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
35.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
35.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
35.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
35.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
35.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
34.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
34.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
34.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
34.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
34.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
34.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
34.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
34.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
34.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
33.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
33.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
33.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
33.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
32.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
32.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
32.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
32.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
32.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
31.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
30.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
30.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
30.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
30.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
30.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
29.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
29.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
29.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
29.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
29.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
28.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
28.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
28.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
28.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
28.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
28.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
28.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
27.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
27.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
27.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
27.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
26.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
26.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
26.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
26.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
26.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
26.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
26.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
26.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
26.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
26.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
25.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
25.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
25.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
25.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
25.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
25.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
25.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
25.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
24.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
24.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
24.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
24.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
24.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
24.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
24.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
24.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
24.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
24.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
24.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
23.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
23.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
23.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
23.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
23.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
23.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
22.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
22.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
22.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
22.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
22.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
22.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
21.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
21.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
21.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
21.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
21.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
21.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
20.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
20.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
20.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
20.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
20.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
20.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
19.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
19.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
19.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
19.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
19.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
19.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
19.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
18.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
18.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
18.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
18.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
18.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
17.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
17.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
17.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
17.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
17.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
17.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
17.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
17.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
16.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
16.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
16.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
16.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
15.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
15.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
14.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
14.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
13.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
13.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
13.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
13.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
13.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
13.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
12.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
12.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
12.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
12.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
11.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
10.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0015730003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0077110003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0086030003
Tumor
0.4
CPT0088970003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0001340003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0065870003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0001230001
Normal
0.2
CPT0011240003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0088480003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0014450004
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0024670003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0001190001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0001180009
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0023360001
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0064400001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0012280003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0092800003
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0012670003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0076330003
Tumor
-0.2
CPT0078530001
Normal
-0.3
CPT0012550003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
