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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPINT1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
169.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
429.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
356.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
326.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
311.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
290.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
272.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
271.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
263.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
248.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
247.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
246.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
237.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
234.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
229.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
221.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
217.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
208.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
206.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
204.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
202.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
202.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
201.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
198.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
196.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
195.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
179.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
177.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
177.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
175.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
168.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
165.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
165.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
161.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
160.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
160.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
158.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
158.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
155.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
154.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
151.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
137.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
135.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
132.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
131.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
131.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
125.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
124.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
123.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
122.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
114.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
113.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
109.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
106.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
101.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
88.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
82.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
78.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
64.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
55.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
29.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
3.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
3.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPINT1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
252.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
237.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
229.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
227.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
210.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
203.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
193.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
188.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
158.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
157.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
156.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
154.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
149.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
147.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
146.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
142.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
141.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
140.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
139.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
137.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
133.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
133.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
130.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
129.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
129.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
128.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
127.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
126.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
125.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
125.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
124.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
122.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
121.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
121.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
120.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
120.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
119.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
118.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
117.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
116.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
115.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
115.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
115.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
113.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
112.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
109.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
108.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
108.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
108.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
106.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
105.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
105.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
105.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
105.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
104.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
104.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
103.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
103.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
101.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
101.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
101.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
101.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
100.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
99.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
98.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
98.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
98.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
97.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
96.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
96.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
95.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
94.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
93.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
93.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
92.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
91.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
91.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
90.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
90.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
90.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
89.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
89.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
89.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
88.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
88.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
88.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
87.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
87.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
87.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
87.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
85.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
85.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
85.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
84.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
83.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
83.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
83.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
82.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
80.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
80.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
80.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
80.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
78.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
78.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
78.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
77.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
77.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
76.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
76.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
76.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
75.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
75.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
74.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
74.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
74.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
74.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
73.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
73.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
73.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
73.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
73.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
72.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
72.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
72.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
72.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
71.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
71.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
71.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
71.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
71.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
70.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
70.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
70.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
69.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
69.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
69.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
68.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
68.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
68.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
68.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
67.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
67.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
67.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
67.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
67.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
67.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
66.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
66.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
65.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
65.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
65.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
64.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
64.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
64.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
64.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
63.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
63.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
63.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
63.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
63.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
62.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
62.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
62.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
62.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
61.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
61.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
61.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
61.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
61.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
61.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
61.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
61.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
61.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
60.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
60.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
60.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
60.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
60.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
60.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
60.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
60.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
59.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
59.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
59.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
59.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
59.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
59.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
59.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
59.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
58.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
58.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
57.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
57.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
57.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
57.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
57.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
57.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
56.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
56.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
56.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
56.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
56.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
56.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
56.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
56.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
56.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
55.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
55.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
55.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
55.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
55.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
54.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
53.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
53.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
53.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
53.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
53.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
53.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
53.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
52.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
52.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
52.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
52.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
52.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
52.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
52.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
51.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
51.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
51.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
51.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
51.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
51.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
51.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
51.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
51.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
51.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
50.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
50.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
50.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
50.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
50.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
50.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
50.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
50.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
50.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
49.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
49.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
49.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
49.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
49.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
49.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
49.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
49.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
48.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
48.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
48.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
48.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
48.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
48.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
48.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
48.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
48.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
48.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
48.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
48.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
47.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
47.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
47.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
47.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
46.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
46.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
46.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
46.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
46.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
46.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
46.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
45.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
45.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
45.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
45.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
45.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
45.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
45.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
45.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
45.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
45.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
45.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
44.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
44.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
44.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
44.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
44.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
44.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
43.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
43.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
43.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
43.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
43.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
43.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
43.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
43.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
43.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
43.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
42.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
42.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
42.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
42.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
42.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
42.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
42.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
42.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
42.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
42.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
42.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
42.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
41.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
41.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
41.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
41.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
40.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
40.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
40.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
40.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
40.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
40.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
40.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
40.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
39.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
39.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
39.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
39.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
39.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
39.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
39.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
39.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
38.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
38.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
38.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
38.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
38.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
38.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
38.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
38.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
37.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
37.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
37.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
36.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
36.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
36.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
36.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
36.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
36.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
36.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
36.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
35.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
34.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
34.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
34.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
34.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
34.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
34.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
34.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
34.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
33.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
33.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
33.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
33.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
33.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
33.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
33.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
33.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
33.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
32.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
32.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
32.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
32.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
32.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
32.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
32.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
32.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
32.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
32.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
31.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
31.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
31.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
31.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
31.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
31.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
30.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
30.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
30.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
30.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
30.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
30.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
30.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
30.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
30.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
29.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
29.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
29.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
29.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
29.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
29.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
29.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
29.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
28.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
28.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
28.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
28.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
28.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
28.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
28.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
28.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
27.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
27.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
27.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
27.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
27.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
27.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
27.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
26.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
26.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
26.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
26.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
25.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
25.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
25.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
25.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
25.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
25.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
25.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
25.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
24.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
24.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
24.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
24.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
24.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
23.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
23.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
23.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
22.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
22.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
22.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
22.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
22.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
21.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
21.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
21.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
21.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
21.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
21.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
21.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
21.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
21.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
20.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
20.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
19.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
19.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
18.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
18.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
18.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
18.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
18.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
18.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
17.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
16.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
16.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
16.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
15.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
14.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
13.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
9.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
8.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
6.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
3.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
3.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPINT1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
64.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
214.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
175.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
158.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
143.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
138.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
138.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
133.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
128.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
127.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
126.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
125.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
123.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
110.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
106.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
105.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
97.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
92.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
90.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
90.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
90.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
89.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
87.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
86.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
85.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
83.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
81.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
77.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
76.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
73.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
71.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
71.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
69.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
67.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
64.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
64.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
63.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
63.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
63.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
62.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
62.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
60.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
59.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
58.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
57.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
57.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
57.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
56.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
56.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
56.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
54.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
53.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
52.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
52.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
51.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
51.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
51.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
51.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
50.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
50.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
49.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
48.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
47.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
47.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
47.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
46.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
46.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
46.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
45.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
45.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
45.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
45.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
42.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
42.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
42.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
39.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
38.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
36.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
36.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
35.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
34.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
33.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
32.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
31.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
29.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
28.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
26.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
25.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
22.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
22.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
20.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
18.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
17.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPINT1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
93.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
421.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
355.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
317.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
314.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
313.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
268.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
265.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
260.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
258.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
244.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
232.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
228.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
227.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
215.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
208.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
204.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
203.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
202.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
192.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
190.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
190.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
188.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
187.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
184.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
183.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
177.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
176.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
176.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
171.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
170.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
170.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
169.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
164.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
163.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
160.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
159.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
157.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
156.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
152.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
151.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
151.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
147.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
144.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
144.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
144.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
143.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
140.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
139.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
138.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
138.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
133.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
133.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
132.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
132.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
130.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
128.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
126.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
126.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
126.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
123.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
121.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
120.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
119.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
119.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
119.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
117.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
117.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
117.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
117.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
116.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
116.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
116.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
116.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
116.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
116.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
114.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
113.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
113.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
113.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
112.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
112.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
112.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
111.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
109.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
109.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
109.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
107.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
107.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
106.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
105.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
104.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
103.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
101.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
98.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
98.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
98.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
97.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
97.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
95.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
95.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
95.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
94.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
94.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
94.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
94.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
93.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
93.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
93.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
92.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
92.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
91.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
91.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
91.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
90.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
90.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
90.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
90.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
89.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
89.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
89.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
89.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
89.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
89.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
88.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
88.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
88.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
87.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
87.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
86.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
86.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
86.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
85.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
84.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
83.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
83.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
82.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
81.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
81.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
81.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
81.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
79.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
79.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
78.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
78.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
78.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
77.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
77.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
77.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
77.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
77.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
75.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
74.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
74.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
72.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
72.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
72.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
71.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
71.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
70.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
69.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
69.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
69.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
69.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
69.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
68.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
68.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
68.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
67.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
67.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
67.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
67.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
67.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
66.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
65.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
65.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
65.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
64.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
64.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
64.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
64.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
63.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
62.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
62.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
61.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
61.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
61.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
61.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
61.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
60.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
60.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
59.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
59.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
58.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
58.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
58.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
57.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
57.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
57.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
57.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
57.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
56.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
56.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
55.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
55.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
54.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
54.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
53.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
53.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
53.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
52.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
52.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
50.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
50.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
50.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
50.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
50.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
49.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
48.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
48.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
48.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
47.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
47.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
47.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
46.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
46.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
46.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
45.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
45.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
44.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
44.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
44.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
44.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
43.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
41.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
41.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
40.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
39.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
39.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
39.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
38.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
38.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
38.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
37.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
37.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
37.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
36.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
36.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
36.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
35.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
34.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
34.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
33.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
32.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
32.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
31.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
31.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
30.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
30.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
30.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
29.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
28.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
26.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
26.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
26.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
24.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
23.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
22.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
22.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
20.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
19.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
16.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
15.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
15.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
12.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
11.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
5.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088480003
Tumor
1.8
CPT0086820003
Tumor
1.5
CPT0012280003
Tumor
1.5
CPT0065430003
Tumor
1.5
CPT0078660003
Tumor
1.5
CPT0007320003
Tumor
1.2
CPT0063630003
Tumor
1.0
CPT0001180009
Tumor
1.0
CPT0012180003
Tumor
0.9
CPT0012670003
Tumor
0.9
CPT0010110003
Tumor
0.8
CPT0023350003
Tumor
0.8
CPT0084560003
Tumor
0.8
CPT0001190001
Normal
0.8
CPT0001220008
Tumor
0.8
CPT0079180003
Tumor
0.7
CPT0086360003
Tumor
0.6
CPT0079410003
Tumor
0.6
CPT0078830003
Tumor
0.6
CPT0024670003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0084590001
Normal
0.5
CPT0086950003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0009060003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0078800003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0021240003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0079300001
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0069190001
Normal
0.2
CPT0079510001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0001270001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0020120003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0025920001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0087040003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0092800003
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0079430001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0088920001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0078670001
Normal
-0.3
CPT0077310003
Tumor
-0.3
CPT0023360001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0063320003
Tumor
-0.3
CPT0092740003
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0025880003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0077500001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0081990003
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0086970003
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0006440003
Tumor
-0.3
CPT0076350001
Normal
-0.3
CPT0077490003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0025610001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0066430001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0088690003
Tumor
-0.4
CPT0092730003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0013790003
Normal
-0.4
CPT0012080003
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0081880003
Tumor
-0.4
CPT0085670003
Tumor
-0.4
CPT0066480003
Tumor
-0.4
CPT0025110003
Tumor
-0.4
CPT0064370003
Tumor
-0.5
CPT0075570001
Normal
-0.5
CPT0086370003
Normal
-0.5
CPT0002270011
Tumor
-0.5
CPT0000780007
Tumor
-0.5
CPT0075560003
Tumor
-0.5
CPT0019990003
Tumor
-0.5
CPT0014470001
Normal
-0.5
CPT0012900004
Tumor
-0.5
CPT0015730003
Tumor
-0.5
CPT0010160003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0075720003
Tumor
-0.5
CPT0092790003
Tumor
-0.6
CPT0006630003
Tumor
-0.6
CPT0009080003
Normal
-0.6
CPT0066470004
Tumor
-0.6
CPT0092290003
Tumor
-0.6
CPT0011240003
Tumor
-0.7
CPT0086030003
Tumor
-0.7
CPT0024680001
Normal
-0.7
CPT0088760003
Tumor
-0.7
CPT0078930003
Tumor
-0.7
CPT0078510003
Tumor
-0.7
CPT0023690003
Tumor
-0.8
CPT0017410003
Tumor
-0.8
CPT0079380003
Tumor
-0.8
CPT0088630003
Tumor
-0.9
CPT0001260009
Tumor
-0.9
CPT0009000003
Tumor
-0.9
CPT0025170003
Tumor
-0.9
CPT0065930003
Tumor
-0.9
CPT0065690003
Tumor
-1.1
CPT0088970003
Tumor
-1.1
CPT0011410003
Tumor
-1.2
CPT0025290003
Tumor
-1.2
CPT0088550004
Tumor
-1.4
CPT0001340003
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.