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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HTRA1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
641.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
182.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
121.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
83.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
80.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
76.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
73.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
66.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
65.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
63.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
62.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
54.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
53.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
51.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
49.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
48.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
47.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
46.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
46.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
45.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
44.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
41.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
40.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
40.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
39.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
38.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
38.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
37.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
37.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
35.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
34.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
34.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
33.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
32.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
32.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
31.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
30.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
30.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
30.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
30.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
29.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
29.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
29.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
26.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
25.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
25.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
24.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
23.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
22.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
21.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
20.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
19.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
18.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
18.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
18.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
16.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
16.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
14.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
12.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
12.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
11.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HTRA1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
245.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
2201.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1795.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
1183.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1088.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
968.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
964.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
829.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
745.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
725.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
670.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
663.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
649.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
601.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
587.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
567.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
565.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
556.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
553.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
548.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
531.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
531.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
527.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
523.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
522.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
519.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
510.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
503.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
495.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
491.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
488.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
486.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
480.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
480.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
479.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
479.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
466.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
464.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
459.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
458.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
456.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
452.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
452.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
450.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
447.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
439.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
438.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
437.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
437.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
436.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
432.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
431.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
430.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
425.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
425.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
423.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
422.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
414.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
413.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
410.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
408.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
408.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
404.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
402.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
397.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
394.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
394.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
392.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
387.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
385.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
380.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
375.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
374.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
367.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
367.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
365.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
362.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
361.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
359.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
359.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
356.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
354.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
354.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
350.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
348.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
347.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
347.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
346.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
346.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
346.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
343.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
343.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
342.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
342.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
342.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
342.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
341.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
338.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
337.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
336.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
335.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
334.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
331.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
329.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
328.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
326.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
326.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
324.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
322.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
322.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
322.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
320.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
319.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
318.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
317.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
317.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
316.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
316.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
316.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
316.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
315.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
312.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
311.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
311.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
310.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
308.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
308.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
304.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
303.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
302.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
302.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
298.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
297.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
297.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
296.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
296.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
296.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
293.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
293.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
293.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
292.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
290.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
290.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
289.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
289.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
289.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
287.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
287.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
285.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
285.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
285.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
285.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
284.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
284.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
283.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
282.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
281.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
281.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
281.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
281.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
280.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
278.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
277.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
277.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
276.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
276.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
275.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
275.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
274.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
274.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
274.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
272.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
272.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
272.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
269.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
269.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
269.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
268.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
267.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
266.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
266.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
266.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
266.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
265.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
265.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
265.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
265.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
263.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
262.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
262.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
261.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
261.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
260.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
260.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
259.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
259.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
257.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
255.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
255.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
253.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
249.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
248.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
248.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
248.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
248.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
247.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
247.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
247.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
246.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
245.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
245.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
245.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
243.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
243.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
241.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
240.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
240.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
236.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
236.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
235.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
233.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
233.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
233.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
233.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
232.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
232.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
231.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
231.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
229.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
229.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
229.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
228.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
228.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
228.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
227.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
227.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
226.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
226.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
226.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
225.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
225.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
224.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
224.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
223.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
222.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
222.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
222.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
221.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
220.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
218.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
218.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
218.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
218.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
217.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
217.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
217.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
216.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
216.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
216.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
215.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
215.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
214.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
214.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
213.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
212.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
211.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
211.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
210.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
209.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
208.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
208.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
207.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
206.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
205.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
205.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
204.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
203.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
203.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
203.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
202.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
202.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
201.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
200.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
199.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
198.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
198.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
198.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
195.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
195.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
195.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
194.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
194.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
194.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
193.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
193.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
193.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
193.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
193.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
192.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
192.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
192.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
191.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
191.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
188.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
188.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
187.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
187.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
186.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
186.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
185.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
185.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
184.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
184.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
184.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
183.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
182.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
182.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
181.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
181.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
181.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
179.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
179.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
177.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
177.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
177.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
177.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
176.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
176.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
176.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
175.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
175.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
175.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
174.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
174.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
173.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
173.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
173.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
172.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
172.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
171.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
171.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
170.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
170.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
170.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
170.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
170.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
169.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
169.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
168.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
168.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
167.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
167.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
167.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
166.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
166.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
165.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
165.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
164.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
163.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
161.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
161.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
161.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
160.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
159.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
159.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
156.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
155.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
155.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
155.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
153.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
153.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
150.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
150.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
150.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
149.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
149.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
149.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
148.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
148.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
147.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
147.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
147.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
146.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
146.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
146.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
146.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
145.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
145.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
144.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
143.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
143.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
143.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
142.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
142.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
142.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
140.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
139.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
138.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
136.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
135.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
135.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
134.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
134.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
132.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
131.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
130.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
129.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
129.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
129.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
128.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
128.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
128.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
128.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
127.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
127.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
127.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
127.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
126.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
126.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
126.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
125.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
124.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
124.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
120.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
119.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
118.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
117.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
117.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
117.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
116.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
116.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
115.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
115.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
114.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
113.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
113.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
113.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
113.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
112.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
112.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
112.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
111.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
110.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
109.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
109.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
108.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
108.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
107.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
107.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
107.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
106.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
106.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
104.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
104.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
103.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
102.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
101.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
100.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
100.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
96.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
96.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
96.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
96.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
95.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
94.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
93.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
92.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
89.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
89.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
88.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
88.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
88.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
87.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
86.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
86.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
86.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
85.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
81.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
81.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
81.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
81.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
79.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
77.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
75.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
74.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
74.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
74.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
74.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
74.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
72.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
72.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
71.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
70.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
70.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
70.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
66.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
66.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
62.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
61.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
61.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
58.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
56.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
54.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
53.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
52.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
48.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
47.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
45.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
44.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
44.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
42.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
39.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
38.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
37.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
27.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
27.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
26.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
24.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
21.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
19.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
16.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HTRA1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
236.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
2449.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
1620.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
1276.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
557.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
505.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
460.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
423.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
416.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
378.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
371.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
362.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
347.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
335.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
313.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
313.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
307.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
303.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
301.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
297.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
291.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
289.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
286.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
283.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
248.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
245.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
244.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
239.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
239.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
232.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
227.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
223.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
223.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
218.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
208.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
206.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
203.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
202.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
198.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
195.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
191.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
190.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
188.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
185.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
183.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
182.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
178.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
177.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
175.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
173.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
171.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
170.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
170.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
169.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
168.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
167.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
165.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
165.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
160.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
150.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
148.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
146.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
145.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
144.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
143.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
141.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
140.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
138.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
134.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
134.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
131.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
127.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
127.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
124.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
123.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
120.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
119.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
116.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
112.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
107.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
99.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
95.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
95.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
90.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
88.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
85.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
82.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
81.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
79.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
78.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
76.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
75.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
73.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
69.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
68.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
52.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
46.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
40.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
34.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HTRA1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
88.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
293.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
290.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
283.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
283.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
279.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
278.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
258.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
252.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
233.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
225.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
223.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
215.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
211.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
205.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
198.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
195.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
193.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
191.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
188.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
187.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
185.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
179.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
179.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
177.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
172.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
171.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
171.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
170.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
167.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
165.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
161.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
160.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
160.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
159.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
158.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
158.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
156.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
155.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
154.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
154.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
153.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
148.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
148.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
143.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
143.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
141.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
139.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
137.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
137.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
136.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
135.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
134.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
132.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
132.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
131.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
130.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
129.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
129.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
128.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
127.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
126.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
125.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
125.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
124.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
122.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
122.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
120.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
119.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
119.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
118.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
117.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
115.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
115.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
114.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
110.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
109.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
109.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
107.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
106.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
106.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
104.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
103.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
103.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
103.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
101.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
101.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
101.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
100.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
100.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
100.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
100.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
100.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
98.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
97.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
96.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
96.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
96.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
95.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
94.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
93.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
93.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
92.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
92.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
92.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
92.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
91.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
90.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
88.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
88.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
88.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
88.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
87.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
87.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
86.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
86.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
85.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
85.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
85.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
84.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
84.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
83.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
83.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
82.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
81.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
81.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
80.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
80.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
80.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
80.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
80.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
79.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
79.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
79.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
78.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
77.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
77.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
77.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
76.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
75.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
75.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
75.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
74.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
74.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
74.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
73.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
73.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
73.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
73.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
72.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
72.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
71.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
71.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
70.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
70.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
69.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
69.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
68.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
67.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
67.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
66.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
66.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
66.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
64.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
63.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
63.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
63.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
63.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
63.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
62.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
62.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
62.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
62.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
61.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
61.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
61.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
60.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
60.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
59.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
57.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
57.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
57.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
57.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
57.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
57.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
57.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
57.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
56.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
56.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
55.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
55.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
55.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
54.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
54.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
54.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
54.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
54.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
53.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
53.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
52.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
52.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
52.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
51.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
51.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
51.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
50.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
50.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
50.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
49.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
49.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
48.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
48.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
48.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
48.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
47.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
47.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
47.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
46.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
46.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
46.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
46.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
46.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
45.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
45.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
43.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
42.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
41.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
40.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
40.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
39.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
39.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
38.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
38.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
38.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
37.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
36.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
35.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
35.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
35.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
34.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
33.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
32.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
31.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
29.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
29.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
29.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
28.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
27.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
27.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
27.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
25.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
25.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
24.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
24.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
24.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
24.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
22.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
21.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
20.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
20.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
18.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
18.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
18.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
17.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
17.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
16.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
15.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
15.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
15.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
15.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
11.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
3.4
CPT0076330003
Tumor
2.8
CPT0015910003
Tumor
2.7
CPT0014160003
Tumor
2.6
CPT0007860003
Tumor
2.2
CPT0063630003
Tumor
2.1
CPT0066480003
Tumor
1.9
CPT0000640003
Tumor
1.9
CPT0017410003
Tumor
1.5
CPT0011240003
Tumor
1.5
CPT0075560003
Tumor
1.4
CPT0081990003
Tumor
1.3
CPT0012670003
Tumor
1.3
CPT0088630003
Tumor
1.3
CPT0002350011
Tumor
1.3
CPT0065690003
Tumor
1.2
CPT0012550003
Tumor
1.1
CPT0025290003
Tumor
1.0
CPT0092730003
Tumor
0.9
CPT0086820003
Tumor
0.7
CPT0081880003
Tumor
0.7
CPT0092190003
Normal
0.7
CPT0023350003
Tumor
0.7
CPT0081600003
Tumor
0.7
CPT0020120003
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0023690003
Tumor
0.4
CPT0010120001
Normal
0.4
CPT0000890001
Normal
0.4
CPT0019990003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0012290003
Normal
0.3
CPT0009020003
Normal
0.3
CPT0075720003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0092790003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0069160003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0018250001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0086830003
Normal
0.0
CPT0079510001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0013790003
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0012900004
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0017850003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0088900003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0088550004
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0019160001
Normal
-0.3
CPT0069190001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0007320003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0086890003
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0020130001
Normal
-0.4
CPT0086360003
Tumor
-0.4
CPT0086370003
Normal
-0.4
CPT0019130003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0063640001
Normal
-0.4
CPT0023360001
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0079230003
Tumor
-0.4
CPT0078840001
Normal
-0.4
CPT0077110003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0001510001
Normal
-0.4
CPT0089460004
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0009000003
Tumor
-0.4
CPT0088920001
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0088780001
Normal
-0.4
CPT0025610001
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0066430001
Normal
-0.4
CPT0006950001
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0081620001
Normal
-0.5
CPT0079270003
Tumor
-0.5
CPT0075170001
Normal
-0.5
CPT0006900003
Tumor
-0.5
CPT0012770003
Normal
-0.5
CPT0065930003
Tumor
-0.5
CPT0087040003
Tumor
-0.5
CPT0023710001
Normal
-0.5
CPT0006440003
Tumor
-0.5
CPT0065450001
Normal
-0.5
CPT0001180009
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0000790001
Normal
-0.5
CPT0010160003
Tumor
-0.5
CPT0001550001
Normal
-0.5
CPT0000780007
Tumor
-0.5
CPT0001500009
Tumor
-0.5
CPT0066520001
Normal
-0.5
CPT0078670001
Normal
-0.6
CPT0006630003
Tumor
-0.6
CPT0009060003
Tumor
-0.6
CPT0001220008
Tumor
-0.6
CPT0014130001
Normal
-0.6
CPT0000870016
Tumor
-0.6
CPT0017450001
Normal
-0.6
CPT0010110003
Tumor
-0.6
CPT0079000001
Normal
-0.6
CPT0092160003
Tumor
-0.6
CPT0092310003
Normal
-0.6
CPT0065810003
Tumor
-0.6
CPT0001190001
Normal
-0.6
CPT0087050003
Normal
-0.6
CPT0020020001
Normal
-0.6
CPT0089040001
Normal
-0.6
CPT0088570001
Normal
-0.7
CPT0012370003
Tumor
-0.7
CPT0025580004
Tumor
-0.7
CPT0088480003
Tumor
-0.7
CPT0025350003
Tumor
-0.7
CPT0082010001
Normal
-0.7
CPT0025230003
Tumor
-0.7
CPT0025880003
Tumor
-0.7
CPT0064400001
Normal
-0.7
CPT0089020003
Tumor
-0.7
CPT0079300001
Normal
-0.8
CPT0079480003
Tumor
-0.8
CPT0012640003
Normal
-0.8
CPT0088640003
Normal
-0.8
CPT0001230001
Normal
-0.8
CPT0079380003
Tumor
-0.8
CPT0078660003
Tumor
-0.8
CPT0001540009
Tumor
-0.8
CPT0065430003
Tumor
-0.9
CPT0015810003
Tumor
-0.9
CPT0024670003
Tumor
-0.9
CPT0025050003
Tumor
-0.9
CPT0088970003
Tumor
-0.9
CPT0079180003
Tumor
-1.0
CPT0086950003
Tumor
-1.0
CPT0078930003
Tumor
-1.0
CPT0078830003
Tumor
-1.0
CPT0011410003
Tumor
-1.1
CPT0015730003
Tumor
-1.1
CPT0026410003
Tumor
-1.2
CPT0078800003
Tumor
-1.4
CPT0012180003
Tumor
-1.5
CPT0078990003
Tumor
-1.5
CPT0014450004
Tumor
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
