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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDX21 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
94.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
46.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
24.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
24.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
19.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
18.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
16.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
15.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
14.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
14.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
14.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
14.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
14.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
14.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
14.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
14.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
13.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
12.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
10.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
10.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
9.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
8.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
7.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
7.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
6.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
5.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
4.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
2.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDX21 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
73.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
68.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
67.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
62.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
59.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
59.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
58.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
57.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
57.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
55.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
55.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
55.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
52.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
51.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
51.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
49.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
46.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
46.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
45.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
45.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
45.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
43.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
43.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
43.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
42.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
42.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
42.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
41.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
41.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
40.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
39.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
39.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
39.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
39.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
38.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
38.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
38.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
38.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
38.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
37.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
37.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
37.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
37.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
37.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
36.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
36.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
36.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
36.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
35.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
35.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
35.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
35.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
35.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
35.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
34.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
34.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
34.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
34.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
34.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
34.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
34.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
34.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
34.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
34.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
34.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
34.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
34.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
34.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
33.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
33.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
33.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
33.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
33.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
32.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
32.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
32.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
32.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
32.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
32.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
32.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
31.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
31.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
31.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
31.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
31.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
31.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
31.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
31.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
31.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
31.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
31.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
31.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
31.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
31.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
30.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
30.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
30.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
30.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
30.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
30.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
30.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
29.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
29.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
29.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
29.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
29.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
29.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
29.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
29.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
29.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
29.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
29.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
29.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
28.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
28.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
28.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
28.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
28.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
28.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
28.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
28.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
28.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
28.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
28.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
28.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
28.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
28.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
28.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
27.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
27.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
27.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
27.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
27.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
27.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
27.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
27.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
27.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
27.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
27.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
27.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
27.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
26.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
26.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
26.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
26.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
26.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
26.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
26.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
26.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
26.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
26.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
26.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
25.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
25.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
25.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
25.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
25.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
25.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
25.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
25.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
25.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
25.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
25.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
25.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
25.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
25.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
25.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
24.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
24.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
24.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
24.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
24.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
24.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
24.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
24.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
24.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
24.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
24.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
24.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
24.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
24.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
24.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
24.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
24.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
23.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
23.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
23.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
23.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
23.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
23.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
23.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
23.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
23.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
23.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
23.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
23.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
23.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
23.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
22.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
22.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
22.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
22.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
22.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
22.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
22.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
22.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
22.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
22.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
22.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
22.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
22.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
22.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
22.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
22.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
22.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
22.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
22.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
21.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
21.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
21.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
21.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
21.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
21.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
21.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
21.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
21.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
21.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
21.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
21.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
20.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
20.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
20.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
20.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
20.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
20.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
20.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
20.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
20.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
20.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
20.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
20.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
19.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
19.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
19.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
19.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
19.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
19.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
19.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
19.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
19.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
19.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
19.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
19.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
19.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
19.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
19.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
19.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
19.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
19.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
19.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
19.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
19.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
19.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
19.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
18.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
18.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
18.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
18.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
18.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
18.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
18.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
18.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
18.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
18.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
18.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
18.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
17.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
17.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
17.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
17.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
17.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
17.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
17.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
17.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
17.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
17.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
17.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
17.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
17.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
16.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
16.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
16.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
16.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
16.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
16.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
16.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
16.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
16.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
16.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
16.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
16.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
16.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
16.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
16.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
15.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
15.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
15.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
15.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
15.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
15.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
15.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
15.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
15.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
15.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
15.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
14.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
14.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
14.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
14.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
14.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
14.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
13.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
12.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
12.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
12.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
12.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
12.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
11.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
11.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
11.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
11.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
10.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
10.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
10.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
9.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
8.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
7.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
6.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
6.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
5.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
5.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDX21 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
83.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
68.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
66.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
66.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
63.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
57.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
57.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
54.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
52.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
51.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
50.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
49.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
46.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
45.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
44.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
44.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
42.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
41.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
40.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
40.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
40.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
40.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
39.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
39.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
39.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
38.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
38.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
37.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
37.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
35.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
35.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
35.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
34.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
34.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
34.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
34.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
34.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
34.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
33.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
33.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
33.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
32.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
32.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
32.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
31.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
30.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
30.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
30.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
30.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
29.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
29.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
28.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
28.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
27.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
27.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
27.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
26.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
26.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
25.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
25.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
25.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
24.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
24.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
24.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
24.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
23.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
23.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
22.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
22.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
21.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
21.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
20.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
20.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
20.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
20.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
19.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
19.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
18.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
17.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
17.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
15.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
13.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
11.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
9.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDX21 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
90.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
68.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
44.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
44.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
43.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
40.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
40.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
39.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
39.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
37.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
37.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
34.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
34.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
34.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
33.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
32.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
32.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
31.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
31.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
30.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
29.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
29.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
27.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
26.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
25.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
25.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
25.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
24.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
24.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
23.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
23.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
23.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
23.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
23.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
22.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
22.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
22.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
22.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
22.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
22.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
21.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
21.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
21.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
21.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
21.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
21.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
20.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
20.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
20.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
20.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
20.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
20.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
19.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
19.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
19.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
19.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
19.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
18.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
18.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
17.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
17.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
17.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
17.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
17.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
17.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
17.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
17.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
17.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
16.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
16.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
16.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
16.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
16.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
16.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
15.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
15.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
15.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
15.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
15.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
15.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
15.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
14.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
14.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
14.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
14.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
13.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
13.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
13.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
13.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
13.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
13.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
12.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
12.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
12.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
12.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
12.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
12.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
12.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
12.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
12.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
12.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
11.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
11.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
11.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
11.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
11.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
11.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
11.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
11.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
11.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
10.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
10.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
10.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
10.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
10.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
10.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
9.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
9.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
9.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
9.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
9.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
9.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
9.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
9.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
8.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
8.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
8.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
8.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
8.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
8.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
7.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
7.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
7.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
7.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
7.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
7.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
7.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
7.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
7.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
6.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
6.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
6.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
5.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
5.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
5.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
5.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
5.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
5.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
5.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
5.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
4.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
4.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
4.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
3.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
3.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
3.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
2.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
1.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079410003
Tumor
1.3
CPT0012180003
Tumor
1.2
CPT0001260009
Tumor
1.1
CPT0084560003
Tumor
1.1
CPT0012550003
Tumor
1.0
CPT0001340003
Tumor
1.0
CPT0023350003
Tumor
0.9
CPT0014450004
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0086870003
Tumor
0.6
CPT0076330003
Tumor
0.6
CPT0012670003
Tumor
0.5
CPT0017850003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0084590001
Normal
0.4
CPT0009060003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0065430003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0017410003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0088480003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0006440003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0075560003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0089460004
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0079230003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0078990003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0025610001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0007470001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0079270003
Tumor
-0.2
CPT0026420001
Normal
-0.2
CPT0021240003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0069000003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0076350001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0000640003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0009080003
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0065930003
Tumor
-0.4
CPT0009020003
Normal
-0.4
CPT0079180003
Tumor
-0.4
CPT0078660003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0075570001
Normal
-0.4
CPT0088970003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
