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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GHITM is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
168.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
320.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
315.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
315.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
273.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
271.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
269.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
254.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
248.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
244.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
243.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
228.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
227.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
225.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
219.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
216.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
213.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
210.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
209.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
204.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
203.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
198.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
193.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
192.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
192.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
191.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
191.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
188.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
184.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
183.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
177.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
175.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
170.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
161.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
159.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
156.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
155.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
151.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
151.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
143.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
139.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
132.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
128.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
128.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
127.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
123.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
123.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
122.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
120.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
119.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
116.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
115.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
111.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
110.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
110.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
102.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
98.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
92.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
91.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
90.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
82.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
80.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
53.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
30.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GHITM is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
104.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
341.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
274.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
267.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
260.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
251.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
233.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
229.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
228.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
224.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
222.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
212.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
207.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
205.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
203.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
197.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
193.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
190.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
188.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
187.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
187.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
184.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
184.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
183.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
183.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
181.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
180.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
175.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
174.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
173.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
172.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
171.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
168.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
167.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
166.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
165.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
163.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
162.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
162.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
160.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
159.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
159.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
159.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
159.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
158.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
158.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
158.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
157.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
156.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
156.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
156.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
155.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
155.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
153.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
153.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
152.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
152.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
152.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
152.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
150.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
149.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
148.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
148.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
148.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
147.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
147.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
146.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
146.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
146.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
145.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
145.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
144.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
144.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
144.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
143.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
143.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
143.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
142.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
142.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
141.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
140.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
140.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
140.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
139.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
139.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
139.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
138.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
138.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
138.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
137.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
137.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
137.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
137.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
137.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
137.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
137.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
136.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
136.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
135.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
135.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
134.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
134.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
134.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
134.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
134.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
133.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
133.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
133.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
133.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
133.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
132.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
132.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
132.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
132.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
131.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
131.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
131.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
131.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
131.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
131.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
130.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
130.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
129.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
129.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
129.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
129.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
129.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
129.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
129.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
128.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
128.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
128.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
128.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
127.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
127.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
127.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
127.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
127.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
126.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
126.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
126.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
126.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
126.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
126.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
125.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
125.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
125.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
124.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
124.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
124.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
124.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
124.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
124.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
124.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
124.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
123.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
123.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
123.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
123.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
123.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
122.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
122.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
122.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
121.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
121.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
121.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
121.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
121.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
121.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
120.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
120.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
120.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
120.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
120.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
120.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
119.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
119.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
119.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
118.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
118.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
118.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
117.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
117.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
117.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
117.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
117.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
116.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
116.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
116.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
116.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
116.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
115.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
115.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
115.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
115.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
115.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
114.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
114.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
114.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
114.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
114.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
114.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
113.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
113.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
113.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
113.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
113.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
113.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
113.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
113.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
112.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
112.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
112.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
112.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
112.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
111.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
111.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
111.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
111.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
111.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
110.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
110.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
109.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
109.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
109.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
109.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
109.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
109.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
109.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
108.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
108.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
108.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
108.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
107.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
107.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
107.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
107.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
107.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
107.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
106.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
106.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
105.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
105.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
105.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
105.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
104.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
104.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
104.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
104.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
104.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
104.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
103.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
103.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
103.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
103.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
103.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
103.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
103.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
103.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
102.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
102.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
102.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
102.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
102.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
102.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
102.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
102.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
102.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
102.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
102.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
102.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
101.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
101.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
101.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
100.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
100.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
100.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
100.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
100.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
100.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
99.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
99.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
99.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
99.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
98.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
98.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
98.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
97.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
97.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
97.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
97.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
97.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
97.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
97.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
96.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
96.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
96.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
96.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
96.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
96.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
96.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
95.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
95.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
95.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
95.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
95.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
95.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
95.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
95.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
94.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
94.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
94.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
94.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
93.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
93.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
93.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
93.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
93.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
93.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
92.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
92.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
92.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
92.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
92.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
92.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
92.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
92.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
92.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
91.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
91.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
91.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
90.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
90.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
90.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
90.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
89.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
89.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
89.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
89.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
89.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
89.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
89.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
88.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
88.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
88.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
88.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
88.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
88.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
87.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
87.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
87.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
87.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
87.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
86.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
86.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
85.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
85.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
85.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
85.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
85.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
85.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
84.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
84.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
84.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
84.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
84.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
83.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
83.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
83.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
83.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
83.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
83.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
82.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
82.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
82.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
81.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
81.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
81.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
81.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
81.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
80.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
79.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
79.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
79.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
79.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
79.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
79.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
78.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
78.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
78.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
78.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
78.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
78.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
78.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
77.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
76.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
76.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
75.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
75.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
74.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
74.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
74.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
73.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
73.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
73.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
72.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
71.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
71.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
71.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
70.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
70.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
70.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
69.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
69.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
69.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
69.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
69.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
69.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
68.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
68.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
67.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
67.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
67.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
66.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
66.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
66.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
66.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
65.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
65.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
65.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
64.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
64.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
64.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
64.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
63.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
63.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
62.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
62.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
62.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
62.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
62.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
61.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
61.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
61.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
61.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
60.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
60.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
59.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
59.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
59.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
59.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
58.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
58.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
58.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
58.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
57.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
57.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
57.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
56.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
56.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
56.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
55.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
55.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
53.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
53.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
53.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
53.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
52.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
51.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
51.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
50.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
50.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
49.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
49.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
48.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
48.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
47.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
46.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
46.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
46.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
45.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
45.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
45.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
45.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
45.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
45.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
44.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
44.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
43.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
42.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
41.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
41.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
40.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
40.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
40.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
40.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
39.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
39.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
39.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
38.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
38.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
37.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
37.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
36.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
36.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
35.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
34.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
33.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
33.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
32.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
32.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
29.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
25.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
24.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
24.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
23.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
23.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
21.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
20.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
19.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
19.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GHITM is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
123.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
305.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
208.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
199.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
172.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
166.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
159.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
157.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
156.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
155.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
155.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
154.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
152.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
152.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
152.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
149.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
147.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
147.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
146.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
146.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
144.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
140.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
139.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
139.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
139.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
139.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
139.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
138.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
136.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
136.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
136.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
136.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
135.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
134.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
132.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
131.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
131.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
129.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
129.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
129.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
128.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
128.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
127.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
127.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
127.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
127.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
126.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
126.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
126.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
125.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
125.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
125.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
125.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
125.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
123.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
123.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
121.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
121.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
119.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
118.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
117.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
115.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
114.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
113.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
112.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
111.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
111.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
110.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
108.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
108.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
106.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
105.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
105.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
104.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
103.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
102.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
102.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
101.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
101.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
100.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
99.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
99.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
99.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
96.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
95.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
95.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
95.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
94.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
93.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
93.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
93.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
92.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
92.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
87.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
75.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
72.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
72.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
72.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
66.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
58.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GHITM is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
135.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
398.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
343.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
325.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
306.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
305.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
302.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
301.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
299.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
269.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
268.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
256.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
254.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
253.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
253.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
251.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
238.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
233.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
233.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
232.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
231.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
231.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
226.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
226.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
226.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
221.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
221.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
221.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
218.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
216.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
216.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
212.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
210.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
210.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
208.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
207.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
206.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
206.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
206.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
206.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
205.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
205.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
203.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
202.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
201.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
201.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
198.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
198.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
196.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
194.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
189.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
187.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
186.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
186.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
185.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
185.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
184.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
182.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
182.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
181.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
179.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
179.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
179.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
178.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
177.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
176.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
176.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
175.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
175.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
174.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
171.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
171.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
171.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
170.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
168.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
168.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
168.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
167.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
167.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
165.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
164.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
164.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
163.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
162.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
162.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
161.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
157.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
157.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
157.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
157.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
154.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
154.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
154.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
153.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
153.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
153.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
153.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
152.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
152.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
151.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
151.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
149.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
148.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
147.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
147.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
147.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
147.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
146.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
146.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
145.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
145.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
144.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
143.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
143.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
142.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
141.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
140.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
140.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
139.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
139.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
139.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
138.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
137.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
137.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
136.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
136.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
136.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
135.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
135.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
134.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
134.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
133.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
133.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
132.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
131.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
131.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
130.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
130.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
129.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
129.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
128.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
128.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
128.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
126.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
126.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
125.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
125.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
125.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
124.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
124.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
122.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
122.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
122.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
121.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
121.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
120.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
119.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
118.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
118.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
118.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
117.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
116.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
116.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
115.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
115.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
114.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
114.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
113.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
113.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
112.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
112.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
109.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
109.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
109.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
109.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
108.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
108.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
107.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
107.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
107.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
106.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
106.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
106.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
106.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
105.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
105.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
105.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
105.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
103.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
102.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
102.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
101.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
100.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
100.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
99.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
99.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
99.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
98.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
97.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
97.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
97.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
96.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
96.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
96.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
96.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
96.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
95.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
95.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
94.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
94.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
94.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
93.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
91.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
89.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
89.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
88.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
86.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
85.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
85.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
84.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
84.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
83.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
83.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
82.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
81.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
80.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
80.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
80.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
79.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
77.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
76.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
76.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
76.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
75.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
74.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
74.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
74.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
73.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
72.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
71.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
71.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
71.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
70.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
70.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
69.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
69.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
68.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
68.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
67.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
67.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
65.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
64.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
64.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
63.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
63.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
61.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
61.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
60.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
60.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
59.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
58.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
57.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
57.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
56.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
55.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
51.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
50.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
50.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
50.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
44.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
43.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
40.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
39.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
38.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
36.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
29.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
28.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
24.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
22.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
21.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
17.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
17.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
16.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
1.9
CPT0001500009
Tumor
1.3
CPT0081880003
Tumor
1.2
CPT0078800003
Tumor
1.2
CPT0092290003
Tumor
0.9
CPT0025050003
Tumor
0.8
CPT0078530001
Normal
0.8
CPT0000790001
Normal
0.7
CPT0006730001
Normal
0.7
CPT0079430001
Normal
0.7
CPT0001350001
Normal
0.7
CPT0023360001
Normal
0.7
CPT0001340003
Tumor
0.7
CPT0007870001
Normal
0.6
CPT0088480003
Tumor
0.6
CPT0088920001
Normal
0.6
CPT0007470001
Normal
0.6
CPT0012670003
Tumor
0.5
CPT0079000001
Normal
0.5
CPT0023350003
Tumor
0.5
CPT0010170001
Normal
0.5
CPT0065450001
Normal
0.5
CPT0007320003
Tumor
0.5
CPT0023710001
Normal
0.5
CPT0014350001
Normal
0.4
CPT0006440003
Tumor
0.4
CPT0025610001
Normal
0.4
CPT0076350001
Normal
0.4
CPT0064400001
Normal
0.4
CPT0088500001
Normal
0.4
CPT0019160001
Normal
0.4
CPT0088780001
Normal
0.4
CPT0002370001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0078940001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0013790003
Normal
0.3
CPT0006950001
Normal
0.3
CPT0024670003
Tumor
0.3
CPT0086370003
Normal
0.3
CPT0092800003
Normal
0.3
CPT0092740003
Normal
0.3
CPT0076330003
Tumor
0.3
CPT0078840001
Normal
0.3
CPT0001550001
Normal
0.3
CPT0087050003
Normal
0.3
CPT0065820001
Normal
0.3
CPT0088570001
Normal
0.3
CPT0015730003
Tumor
0.3
CPT0077140001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0086870003
Tumor
0.2
CPT0086890003
Normal
0.2
CPT0088640003
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0075570001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0012550003
Tumor
0.2
CPT0086970003
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0000890001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0025110003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0012180003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0012280003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0020020001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0014130001
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0025060001
Normal
-0.2
CPT0064370003
Tumor
-0.3
CPT0086360003
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0087040003
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0079510001
Normal
-0.3
CPT0063630003
Tumor
-0.3
CPT0012090003
Normal
-0.3
CPT0001540009
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0025170003
Tumor
-0.4
CPT0000660001
Normal
-0.4
CPT0026410003
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0014470001
Normal
-0.4
CPT0020120003
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0079270003
Tumor
-0.5
CPT0085670003
Tumor
-0.5
CPT0078930003
Tumor
-0.5
CPT0001270001
Normal
-0.5
CPT0088690003
Tumor
-0.5
CPT0077310003
Tumor
-0.5
CPT0078510003
Tumor
-0.5
CPT0012290003
Normal
-0.5
CPT0007860003
Tumor
-0.5
CPT0018250001
Normal
-0.5
CPT0011410003
Tumor
-0.6
CPT0079300001
Normal
-0.6
CPT0025230003
Tumor
-0.6
CPT0079380003
Tumor
-0.6
CPT0075170001
Normal
-0.6
CPT0024680001
Normal
-0.6
CPT0077110003
Tumor
-0.6
CPT0006900003
Tumor
-0.7
CPT0078990003
Tumor
-0.7
CPT0025290003
Tumor
-0.7
CPT0089020003
Tumor
-0.7
CPT0075560003
Tumor
-0.7
CPT0066470004
Tumor
-0.7
CPT0019130003
Tumor
-0.7
CPT0088970003
Tumor
-0.7
CPT0017450001
Normal
-0.7
CPT0025880003
Tumor
-0.7
CPT0012770003
Normal
-0.7
CPT0012370003
Tumor
-0.7
CPT0081990003
Tumor
-0.7
CPT0092790003
Tumor
-0.8
CPT0000640003
Tumor
-0.8
CPT0012080003
Tumor
-0.8
CPT0069160003
Tumor
-0.8
CPT0006630003
Tumor
-0.8
CPT0025350003
Tumor
-0.8
CPT0012640003
Normal
-0.8
CPT0015910003
Tumor
-0.8
CPT0077320001
Normal
-0.8
CPT0000780007
Tumor
-0.8
CPT0084590001
Normal
-0.8
CPT0009000003
Tumor
-0.8
CPT0078830003
Tumor
-0.9
CPT0017850003
Tumor
-1.0
CPT0077490003
Tumor
-1.0
CPT0009060003
Tumor
-1.0
CPT0065930003
Tumor
-1.1
CPT0021240003
Tumor
-1.1
CPT0092190003
Normal
-1.2
CPT0023690003
Tumor
-1.2
CPT0088760003
Tumor
-1.2
CPT0069000003
Tumor
-1.3
CPT0009080003
Normal
-1.3
CPT0092730003
Tumor
-1.4
CPT0012920003
Normal
-1.4
CPT0009020003
Normal
-1.4
CPT0066480003
Tumor
-1.5
CPT0012900004
Tumor
-1.5
CPT0065870003
Tumor
-1.7
CPT0084560003
Tumor
-1.9
CPT0011240003
Tumor
-2.1
CPT0088550004
Tumor
-2.3
CPT0079180003
Tumor
-2.5
CPT0017410003
Tumor
-2.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.