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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DEPP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
65.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
376.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
287.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
251.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
226.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
214.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
182.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
167.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
125.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
123.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
115.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
90.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
87.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
87.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
87.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
78.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
74.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
72.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
71.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
62.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
59.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
58.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
58.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
55.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
52.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
52.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
52.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
50.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
45.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
44.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
42.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
41.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
38.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
35.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
35.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
35.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
34.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
32.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
31.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
31.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
29.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
28.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
27.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
26.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
25.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
24.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
22.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
22.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
22.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
21.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
20.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
20.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
19.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
19.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
18.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
17.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
16.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
16.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
14.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DEPP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
228.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
852.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
823.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
807.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
805.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
778.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
728.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
698.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
679.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
678.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
670.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
653.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
625.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
615.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
591.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
580.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
573.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
571.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
566.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
544.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
532.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
531.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
520.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
519.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
519.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
513.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
512.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
507.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
492.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
491.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
490.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
490.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
488.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
485.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
484.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
463.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
461.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
460.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
458.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
453.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
451.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
451.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
450.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
450.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
449.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
449.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
448.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
445.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
441.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
439.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
437.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
435.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
434.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
433.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
432.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
432.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
428.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
428.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
427.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
425.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
424.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
421.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
415.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
413.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
410.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
407.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
405.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
399.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
398.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
397.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
393.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
391.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
387.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
386.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
386.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
386.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
380.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
379.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
378.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
377.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
376.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
376.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
374.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
371.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
369.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
367.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
367.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
366.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
366.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
363.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
363.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
362.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
362.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
357.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
350.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
348.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
348.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
344.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
343.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
340.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
340.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
339.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
338.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
337.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
337.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
337.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
337.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
334.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
334.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
332.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
329.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
323.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
322.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
321.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
321.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
320.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
320.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
318.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
317.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
316.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
316.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
316.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
311.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
310.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
310.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
309.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
308.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
306.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
304.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
304.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
303.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
302.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
302.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
302.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
296.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
295.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
295.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
295.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
293.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
292.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
291.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
291.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
288.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
288.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
286.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
284.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
284.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
284.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
282.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
282.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
279.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
278.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
277.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
276.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
275.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
275.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
275.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
274.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
274.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
273.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
271.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
271.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
270.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
268.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
264.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
261.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
261.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
258.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
258.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
256.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
256.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
256.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
256.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
254.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
254.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
253.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
253.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
249.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
248.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
248.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
247.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
244.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
244.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
243.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
242.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
241.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
241.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
241.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
241.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
240.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
239.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
239.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
239.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
239.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
238.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
237.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
236.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
235.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
234.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
233.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
231.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
231.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
231.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
230.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
229.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
228.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
227.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
227.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
227.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
226.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
226.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
225.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
225.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
223.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
223.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
223.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
223.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
222.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
220.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
219.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
218.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
218.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
216.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
215.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
214.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
214.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
214.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
213.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
213.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
213.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
212.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
211.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
211.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
210.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
210.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
210.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
208.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
207.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
207.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
206.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
205.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
205.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
205.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
204.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
204.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
204.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
203.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
203.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
203.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
203.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
203.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
203.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
202.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
202.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
201.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
201.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
201.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
200.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
199.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
198.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
197.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
196.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
196.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
195.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
194.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
191.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
191.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
190.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
188.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
187.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
187.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
186.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
186.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
185.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
185.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
185.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
185.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
184.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
184.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
184.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
184.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
183.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
183.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
183.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
182.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
182.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
182.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
181.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
180.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
180.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
180.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
179.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
178.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
177.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
177.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
177.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
176.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
176.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
176.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
176.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
175.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
174.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
174.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
174.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
173.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
173.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
172.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
171.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
171.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
170.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
170.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
170.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
169.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
166.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
165.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
165.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
165.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
164.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
163.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
163.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
161.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
160.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
160.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
160.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
159.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
159.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
159.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
159.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
159.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
158.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
157.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
157.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
156.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
156.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
156.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
156.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
155.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
155.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
155.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
154.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
153.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
152.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
152.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
151.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
150.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
150.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
150.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
149.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
148.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
148.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
148.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
146.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
145.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
145.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
145.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
145.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
144.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
144.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
143.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
143.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
142.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
141.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
141.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
141.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
140.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
140.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
139.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
139.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
139.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
139.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
138.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
138.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
138.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
137.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
137.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
137.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
136.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
136.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
135.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
135.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
134.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
133.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
132.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
132.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
131.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
131.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
130.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
129.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
129.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
129.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
128.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
128.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
127.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
127.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
126.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
125.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
125.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
124.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
124.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
124.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
123.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
123.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
122.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
121.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
121.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
118.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
118.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
118.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
118.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
117.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
117.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
117.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
117.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
115.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
115.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
114.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
113.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
113.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
113.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
112.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
112.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
110.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
108.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
103.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
103.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
103.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
103.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
102.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
100.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
98.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
98.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
98.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
98.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
97.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
97.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
97.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
96.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
96.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
95.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
95.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
94.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
93.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
93.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
92.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
91.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
91.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
91.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
90.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
90.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
89.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
87.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
86.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
85.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
85.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
85.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
84.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
83.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
82.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
80.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
80.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
79.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
79.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
77.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
77.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
77.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
77.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
76.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
76.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
75.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
74.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
74.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
74.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
68.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
67.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
67.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
66.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
65.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
64.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
64.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
64.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
64.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
62.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
61.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
61.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
60.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
60.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
59.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
54.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
52.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
52.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
52.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
50.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
45.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
43.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
42.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
40.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
39.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
36.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
35.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
35.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
33.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
33.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
33.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
29.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
25.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
25.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
24.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
23.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
19.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
18.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
16.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
14.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
14.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
12.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
11.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
10.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
8.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DEPP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
227.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
975.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
740.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
643.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
618.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
569.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
511.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
504.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
454.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
449.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
435.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
431.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
402.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
400.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
397.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
393.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
388.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
384.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
373.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
371.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
340.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
324.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
319.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
315.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
305.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
286.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
275.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
274.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
274.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
271.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
266.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
258.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
255.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
255.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
250.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
248.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
241.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
229.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
227.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
216.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
212.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
211.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
209.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
207.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
202.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
200.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
196.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
195.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
194.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
194.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
190.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
190.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
188.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
179.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
175.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
174.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
171.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
171.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
167.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
159.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
158.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
158.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
157.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
147.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
147.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
140.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
137.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
136.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
136.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
134.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
129.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
126.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
124.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
124.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
121.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
118.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
112.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
109.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
107.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
105.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
105.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
104.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
104.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
103.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
97.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
95.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
93.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
90.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
83.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
71.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
68.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
66.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
63.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
62.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
61.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
59.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
54.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
23.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DEPP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
392.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
349.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
298.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
266.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
203.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
200.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
199.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
194.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
190.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
189.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
180.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
169.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
167.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
166.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
165.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
150.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
142.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
137.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
131.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
130.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
129.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
126.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
121.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
119.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
118.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
116.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
114.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
110.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
110.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
103.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
99.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
98.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
98.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
96.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
94.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
93.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
89.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
88.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
85.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
85.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
83.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
80.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
80.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
77.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
75.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
73.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
71.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
69.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
68.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
66.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
66.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
64.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
62.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
60.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
60.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
57.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
57.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
54.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
54.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
53.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
53.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
50.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
49.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
48.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
48.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
48.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
47.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
47.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
47.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
47.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
46.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
46.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
46.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
45.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
45.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
45.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
44.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
44.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
44.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
44.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
43.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
43.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
41.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
40.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
40.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
39.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
39.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
39.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
39.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
37.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
36.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
36.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
36.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
35.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
35.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
35.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
34.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
34.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
34.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
34.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
34.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
34.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
33.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
33.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
32.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
32.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
31.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
30.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
30.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
30.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
29.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
29.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
28.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
28.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
28.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
28.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
27.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
27.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
27.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
27.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
27.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
26.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
26.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
26.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
25.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
25.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
24.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
24.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
24.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
24.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
23.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
23.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
23.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
23.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
22.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
22.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
22.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
22.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
22.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
22.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
22.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
21.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
21.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
20.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
20.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
20.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
20.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
20.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
20.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
19.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
19.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
19.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
19.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
18.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
18.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
18.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
18.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
18.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
18.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
17.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
17.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
17.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
17.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
16.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
16.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
16.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
16.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
15.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
15.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
15.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
15.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
15.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
15.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
14.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
14.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
14.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
14.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
13.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
13.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
13.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
13.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
13.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
13.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
13.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
12.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
12.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
12.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
12.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
12.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
11.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
11.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
10.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
10.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
10.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
9.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
9.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
9.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
9.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
8.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
8.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
8.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
7.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
7.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
7.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
7.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
7.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
6.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
6.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
6.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
6.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
6.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
5.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
5.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
5.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
5.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
4.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
4.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
3.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
